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Accession: PRJNA938173 ID: 938173

Haplotype resolved chromosome-level genome assembly of Northern red oak (Quercus rubra L.)

This project generated a high quality Quercus rubra genome assembly and annotation.
AccessionPRJNA938173
Data TypeGenome sequencing and assembly
ScopeMultispecies
PublicationsKapoor B et al., "A haplotype-resolved chromosome-scale genome for Quercus rubra L. provides insights into the genetics of adaptive traits for red oak species.", G3 (Bethesda), 2023 Nov 1;13(11)
Grants
  • "McIntire-Stennis capacity grant" (Grant ID NI20MSCFRXXXG043, United States Dept of Agriculture)
  • "Federal Appropriations Project PEN04532" (Grant ID 1000326, National Institute of Food and Agriculture)
SubmissionRegistration date: 23-Feb-2023
University of Tennessee, Knoxville
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)557
WGS master1
SRA Experiments7
Protein Sequences47694
Publications
PubMed1
PMC1
Other datasets
BioSample5
Assembly1
SRA Data Details
ParameterValue
Data volume, Gbases566
Data volume, Tbytes0.36

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