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This project collects the sequencing data and assemblies generated for Durinskia oculata to facilitate genome assembly and annotation as part of the Aquatic Symbiosis Genomics (ASG) Project (https://www.aquaticsymbiosisgenomics.org/) from samples supplied by the ASG Evolution-of-New-Symbioses Hub (https://www.aquaticsymbiosisgenomics.org/collaborators/evolution-of-new-symbioses-in-single-celled-eukaryotes/). The data under this project are made available subject to the Tree of Life Open Data Release Policy (https://www.darwintreeoflife.org/project-resources/).
| Accession | PRJEB61220 |
| Type | Umbrella project |
| Organism | Durinskia oculata[Taxonomy ID: 2054275] Eukaryota; Sar; Alveolata; Dinophyceae; Peridiniales; Kryptoperidiniaceae; Durinskia; Durinskia oculata |
| Submission | Registration date: 7-Apr-2023
WELLCOME SANGER INSTITUTE |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 21 |
| WGS master | 2 |
| Genomic DNA | 19 |
| SRA Experiments | 3 |
| Other datasets |
| BioSample | 4 |
| Assembly | 2 |
pyDurOcul encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Scaffolds Total |
1
1
2
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJEB62010 | Chromosomes | Nitzschia sp. DOCU1 | Nitzschia sp. DOCU1 genome assembly, pyDurOcul1.Nitzschia_sp_1 (WELLCOME SANGER INSTITUTE) | | PRJEB62009 | Scaffolds | Nitzschia sp. DOCU1 | Nitzschia sp. DOCU1 genome assembly, pyDurOcul1.Nitzschia_sp_1, alternate haplotype (WELLCOME SANGER INSTITUTE) |
|
| Other | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJEB61219 | Durinskia oculata | Durinskia oculata, genomic and transcriptomic data (WELLCOME SANGER INSTITUTE) |
|