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Accession: PRJNA954276 ID: 954276

third-generation cephalosporin-resistant Enterobacteriaceae in a neonatal intensive care unit

Monocentric observational cohort study in a tertiary NICU in Heidelberg, Germany, enrolled all hospitalized neonates screened for cephalosporin- and carbapenem-resistant Gram-negative bacilli.
AccessionPRJNA954276
Data TypeGenome sequencing
ScopeMultispecies
SubmissionRegistration date: 11-Apr-2023
University hospital Lubeck
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)89
Other datasets
BioSample89
Assembly89
Assembly details:
Assembly levelNumber of Assemblies
89
89
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_040409665.1ContigJARVNJ000000000SAMN34137585
KE9619
GCA_040409645.1ContigJARVNL000000000SAMN34137587
D2922
GCA_040409625.1ContigJARVNM000000000SAMN34137588
KE10216
GCA_040409605.1ContigJARVNN000000000SAMN34137589
KE9609
GCA_040409585.1ContigJARVNO000000000SAMN34137590
KE9919
GCA_040409565.1ContigJARVNP000000000SAMN34137591
KE7375
GCA_040409545.1ContigJARVNR000000000SAMN34137593
D2921
GCA_040409485.1ContigJARVNQ000000000SAMN34137592
KE8723
GCA_040409685.1ContigJARVNK000000000SAMN34137586
KE10208
GCA_040409525.1ContigJARVNS000000000SAMN34137594
KE10064
GCA_040409505.1ContigJARVNT000000000SAMN34137595
KE9581
GCA_040409465.1ContigJARVNU000000000SAMN34137596
KE9595
GCA_040409425.1ContigJARVNV000000000SAMN34137597
KE9305
GCA_040409445.1ContigJARVNW000000000SAMN34137598
KE6465
GCA_040409405.1ContigJARVNX000000000SAMN34137599
KE8543
GCA_040408695.1ContigJARVPE000000000SAMN34137632
KE8034
GCA_040408665.1ContigJARVPF000000000SAMN34137633
D1934
GCA_040409365.1ContigJARVNZ000000000SAMN34137601
KE9483
GCA_040409385.1ContigJARVNY000000000SAMN34137600
KE9859
GCA_040409345.1ContigJARVOA000000000SAMN34137602
KE9319
GCA_040409325.1ContigJARVOB000000000SAMN34137603
KE9404
GCA_040409305.1ContigJARVOC000000000SAMN34137604
KE9056
GCA_040409285.1ContigJARVOD000000000SAMN34137605
KE8394
GCA_040409265.1ContigJARVOF000000000SAMN34137607
D1645
GCA_040409225.1ContigJARVOH000000000SAMN34137609
D1845
GCA_040409245.1ContigJARVOE000000000SAMN34137606
KE9632
GCA_040409205.1ContigJARVOJ000000000SAMN34137611
KE9318
GCA_040409185.1ContigJARVOG000000000SAMN34137608
KE9477
GCA_040409145.1ContigJARVOK000000000SAMN34137612
KE9967
GCA_040409165.1ContigJARVOI000000000SAMN34137610
D1846
GCA_040409125.1ContigJARVOL000000000SAMN34137613
KE8125
GCA_040409105.1ContigJARVOM000000000SAMN34137614
KE6464
GCA_040409065.1ContigJARVOO000000000SAMN34137616
KE8451
GCA_040409085.1ContigJARVON000000000SAMN34137615
KE9436
GCA_040409045.1ContigJARVOS000000000SAMN34137620
KE10192
GCA_040409005.1ContigJARVOP000000000SAMN34137617
KE9320
GCA_040409025.1ContigJARVOQ000000000SAMN34137618
KE9770
GCA_040408985.1ContigJARVOR000000000SAMN34137619
KE10270
GCA_040408965.1ContigJARVOT000000000SAMN34137621
KE9608
GCA_040408945.1ContigJARVOV000000000SAMN34137623
KE9348
GCA_040408925.1ContigJARVOY000000000SAMN34137626
D1647
GCA_040408905.1ContigJARVOU000000000SAMN34137622
KE9315
GCA_040408885.1ContigJARVOX000000000SAMN34137625
KE9297
GCA_040408865.1ContigJARVOW000000000SAMN34137624
KE9580
GCA_040408845.1ContigJARVOZ000000000SAMN34137627
KE8544
GCA_040408825.1ContigJARVPC000000000SAMN34137630
KE8035
GCA_040408775.1ContigJARVPB000000000SAMN34137629
D1936
GCA_040408765.1ContigJARVPD000000000SAMN34137631
KE8037
GCA_040408795.1ContigJARVPA000000000SAMN34137628
D1929
GCA_040407055.1ContigJARVPV000000000SAMN34137649
KE9322
GCA_040407345.1ContigJARVPH000000000SAMN34137635
KE9726
GCA_040407355.1ContigJARVPJ000000000SAMN34137637
KE9819
GCA_040407335.1ContigJARVPI000000000SAMN34137636
KE9311
GCA_040407305.1ContigJARVPK000000000SAMN34137638
KE10243
GCA_040407295.1ContigJARVPL000000000SAMN34137639
KE9453
GCA_040407265.1ContigJARVPN000000000SAMN34137641
KE9302
GCA_040407245.1ContigJARVPM000000000SAMN34137640
KE6463
GCA_040407225.1ContigJARVPO000000000SAMN34137642
KE10068
GCA_040407215.1ContigJARVPP000000000SAMN34137643
KE6466
GCA_040407165.1ContigJARVPS000000000SAMN34137646
D1844
GCA_040407135.1ContigJARVPQ000000000SAMN34137644
KE9432
GCA_040407155.1ContigJARVPT000000000SAMN34137647
KE9607
GCA_040407115.1ContigJARVPU000000000SAMN34137648
KE10136
GCA_040407145.1ContigJARVPR000000000SAMN34137645
KE10242
GCA_040407405.1ContigJARVPG000000000SAMN34137634
D1933
GCA_040407065.1ContigJARVPW000000000SAMN34137650
KE9480
GCA_040407035.1ContigJARVPX000000000SAMN34137651
D1853
GCA_040407045.1ContigJARVPY000000000SAMN34137652
KE9561
GCA_040407005.1ContigJARVPZ000000000SAMN34137653
KE10149
GCA_040406995.1ContigJARVQB000000000SAMN34137655
KE9968
GCA_040406975.1ContigJARVQC000000000SAMN34137656
KE8965
GCA_040406945.1ContigJARVQD000000000SAMN34137657
KE10063
GCA_040406935.1ContigJARVQA000000000SAMN34137654
KE9838
GCA_040406905.1ContigJARVQE000000000SAMN34137658
KE8482
GCA_040406895.1ContigJARVQF000000000SAMN34137659
KE9057
GCA_040406865.1ContigJARVQG000000000SAMN34137660
KE9860
GCA_040406855.1ContigJARVQI000000000SAMN34137662
KE10114
GCA_040406815.1ContigJARVQH000000000SAMN34137661
KE9820
GCA_040406805.1ContigJARVQJ000000000SAMN34137663
KE9813
GCA_040406795.1ContigJARVQK000000000SAMN34137664
KE9596
GCA_040406745.1ContigJARVQM000000000SAMN34137666
KE9544
GCA_040406735.1ContigJARVQN000000000SAMN34137667
KE9791
GCA_040406755.1ContigJARVQL000000000SAMN34137665
KE9586
GCA_040406705.1ContigJARVQO000000000SAMN34137668
KE9793
GCA_040406655.1ContigJARVQR000000000SAMN34137671
KE10198
GCA_040406645.1ContigJARVQQ000000000SAMN34137670
KE10118
GCA_040406695.1ContigJARVQP000000000SAMN34137669
KE10127
GCA_040406595.1ContigJARVQT000000000SAMN34137673
KE7501
GCA_040406635.1ContigJARVQS000000000SAMN34137672
KE7482

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