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Accession: PRJNA982082 ID: 982082

Xanthomonas nasturtii

Genome sequencing of Xanthomonas nasturtii

See Genome Information for Xanthomonas nasturtii
Xanthomonas nasturtii is a bacterial pathogen of watercress.
AccessionPRJNA982082
Data TypeGenome sequencing
ScopeMultiisolate
OrganismXanthomonas nasturtii[Taxonomy ID: 1843581]
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Xanthomonas; Xanthomonas nasturtii
Publications
  • Published online: Vicente J et al., "Pathogenic, phenotypic and molecular characterisation of Xanthomonas nasturtii sp. nov. and Xanthomonas floridensis sp. nov., new species of Xanthomonas associated with watercress production in Florida", International Journal of Systematic and Evolutionary Microbiology, 2017;67(9):3645-3654
  • Published online: Lascelles D et al., "First report of black rot caused by Xanthomonas nasturtii on watercress in Spain and Portugal", New Disease Reports, 2022;46(2)
Grants
  • "Xanthomonas plant diseases: mitigating existing, emerging and future threats to UK agriculture" (Grant ID BB/T010916/1, UK Research and Innovation)
SubmissionRegistration date: 2-Feb-2024
University of Exeter
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)23
WGS master21
Genomic DNA2
SRA Experiments30
Protein Sequences7888
Other datasets
BioSample27
Assembly23
Assembly details:
Assembly levelNumber of Assemblies
2
3
18
23
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_023337515.1ContigJAMBEO000000000
SAMN27412253
10013C
GCA_023337475.1ContigJAMBEM000000000
SAMN27412255
10015B
GCA_023337455.1ContigJAMBEN000000000
SAMN27412254
10014A
GCA_023337425.1ContigJAMBEK000000000
SAMN27412257
10013A
GCA_023337415.1ContigJAMBEJ000000000
SAMN27412258
10013B
GCA_023337395.1ContigJAMBEL000000000
SAMN27412256
10013E
GCA_023337355.1ContigJAMBEH000000000
SAMN27412260
10007A
GCA_023337335.1ContigJAMBED000000000
SAMN27412264
10016B
GCA_023337315.1ContigJAMBEG000000000
SAMN27412261
8984
GCA_023337265.1ContigJAMBEE000000000
SAMN27412263
10015A
GCA_023337255.1ContigJAMBEC000000000
SAMN27412265
10017C
GCA_023337215.1ContigJAMBEA000000000
SAMN27412267
10016C
GCA_023337225.1ContigJAMBEB000000000
SAMN27412266
10017B
GCA_023337195.1ContigJAMBDX000000000
SAMN27412270
10022A
GCA_023337155.1ContigJAMBDY000000000
SAMN27412269
10012A
GCA_023337165.1ContigJAMBDZ000000000
SAMN27412268
10054
GCA_023337135.1ContigJAMBDW000000000
SAMN27412271
10055
GCA_041519835.1ContigJBGOFZ000000000
SAMN43286069
WHRI 10260
GCA_023337365.3Complete genomeSAMN27412259
10053
GCA_023337295.3Complete genomeSAMN27412262
8853
GCA_040194455.1ScaffoldJBEFXK000000000
SAMN39960496
WHRI 10059
GCA_040195425.1ScaffoldJBEFXJ000000000
SAMN39960494
WHRI 10058
GCA_040194425.1ScaffoldJBEFXL000000000
SAMN39960495
WHRI 10049A
SRA Data Details
ParameterValue
Data volume, Gbases37
Data volume, Mbytes11944

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