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Accession: PRJNA989674 ID: 989674

Pathogens genomic sequencing project 196

Pathogens genomic sequencing project 196
AccessionPRJNA989674
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 30-Jun-2023
Nanjing Drum Tower Hospital
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)196
Other datasets
BioSample196
Assembly196
Assembly details:
Assembly levelNumber of Assemblies
144
52
196
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_031197895.1ScaffoldJAVIKL000000000SAMN36186295
10362
GCA_031197875.1ScaffoldJAVIKM000000000SAMN36186296
10521
GCA_031197855.1ScaffoldJAVIKN000000000SAMN36186297
10631
GCA_031197835.1ScaffoldJAVIKO000000000SAMN36186298
10659
GCA_031197815.1ScaffoldJAVIKP000000000SAMN36186299
10788
GCA_031197795.1ScaffoldJAVIKQ000000000SAMN36186300
10888
GCA_031197775.1ScaffoldJAVIKR000000000SAMN36186301
11231
GCA_031197755.1ScaffoldJAVIKS000000000SAMN36186302
11253
GCA_031197715.1ContigJAVIKW000000000SAMN36186306
11400
GCA_031197705.1ScaffoldJAVIKV000000000SAMN36186305
11372
GCA_031197695.1ScaffoldJAVIKT000000000SAMN36186303
11305
GCA_031197635.1ContigJAVIKX000000000SAMN36186307
11402
GCA_031197615.1ScaffoldJAVIKY000000000SAMN36186308
11413
GCA_031197585.1ScaffoldJAVIKZ000000000SAMN36186309
11461
GCA_031197575.1ScaffoldJAVILA000000000SAMN36186310
11489
GCA_031197545.1ScaffoldJAVILD000000000SAMN36186313
11772
GCA_031197535.1ScaffoldJAVILE000000000SAMN36186314
11871
GCA_031197505.1ContigJAVILC000000000SAMN36186312
11569
GCA_031197485.1ScaffoldJAVILG000000000SAMN36186316
11975
GCA_031197475.1ScaffoldJAVILF000000000SAMN36186315
11974
GCA_031197445.1ScaffoldJAVILH000000000SAMN36186317
11979
GCA_031197405.1ScaffoldJAVILJ000000000SAMN36186319
12055
GCA_031197385.1ScaffoldJAVILL000000000SAMN36186321
12076
GCA_031197375.1ScaffoldJAVILK000000000SAMN36186320
12059
GCA_031197355.1ScaffoldJAVILM000000000SAMN36186322
12150
GCA_031197335.1ScaffoldJAVILN000000000SAMN36186323
12182
GCA_031197305.1ScaffoldJAVILQ000000000SAMN36186326
12424
GCA_031197295.1ScaffoldJAVILO000000000SAMN36186324
12225
GCA_031197275.1ScaffoldJAVILP000000000SAMN36186325
12360
GCA_031197255.1ScaffoldJAVILR000000000SAMN36186327
12428
GCA_031197225.1ScaffoldJAVILS000000000SAMN36186328
12433
GCA_031197215.1ScaffoldJAVILU000000000SAMN36186330
12454
GCA_031197185.1ScaffoldJAVILV000000000SAMN36186331
12533
GCA_031197175.1ScaffoldJAVILT000000000SAMN36186329
12439
GCA_031197155.1ScaffoldJAVIMA000000000SAMN36186336
12882
GCA_031197085.1ScaffoldJAVILZ000000000SAMN36186335
12860
GCA_031197005.1ScaffoldJAVIMG000000000SAMN36186342
13317
GCA_031196975.1ScaffoldJAVIMD000000000SAMN36186339
13205
GCA_031196955.1ScaffoldJAVIME000000000SAMN36186340
13252
GCA_031196905.1ScaffoldJAVIMH000000000SAMN36186343
13449
GCA_031196915.1ContigJAVIMI000000000SAMN36186344
13513
GCA_031196895.1ScaffoldJAVIMF000000000SAMN36186341
13303
GCA_031196875.1ScaffoldJAVIMJ000000000SAMN36186345
14081
GCA_031196835.1ScaffoldJAVIMK000000000SAMN36186346
14118
GCA_031196845.1ScaffoldJAVIML000000000SAMN36186347
14179
GCA_031196805.1ScaffoldJAVIMR000000000SAMN36186353
14646
GCA_031196795.1ScaffoldJAVIMM000000000SAMN36186348
14184
GCA_031196775.1ScaffoldJAVIMN000000000SAMN36186349
14201
GCA_031197095.1ScaffoldJAVILX000000000SAMN36186333
12740
GCA_031197075.1ScaffoldJAVILY000000000SAMN36186334
12841
GCA_031197105.1ScaffoldJAVILW000000000SAMN36186332
12547
GCA_031197015.1ScaffoldJAVIMB000000000SAMN36186337
12907
GCA_031196735.1ScaffoldJAVIMO000000000SAMN36186350
14254
GCA_031196715.1ScaffoldJAVIMQ000000000SAMN36186352
14584
GCA_031196695.1ScaffoldJAVIMS000000000SAMN36186354
14937
GCA_031196645.1ScaffoldJAVIMU000000000SAMN36186356
14991
GCA_031196625.1ScaffoldJAVIMV000000000SAMN36186357
15196
GCA_031196615.1ScaffoldJAVIMY000000000SAMN36186360
15342
GCA_031196595.1ContigJAVINA000000000SAMN36186362
15428
GCA_031196575.1ScaffoldJAVIMW000000000SAMN36186358
15241
GCA_031196545.1ScaffoldJAVIMX000000000SAMN36186359
15285
GCA_031196535.1ContigJAVIMZ000000000SAMN36186361
15376
GCA_031196505.1ScaffoldJAVINC000000000SAMN36186364
15533
GCA_031196475.1ScaffoldJAVIND000000000SAMN36186365
15565
GCA_031196485.1ScaffoldJAVINE000000000SAMN36186366
15602
GCA_031196455.1ContigJAVINB000000000SAMN36186363
15514
GCA_031196395.1ScaffoldJAVINH000000000SAMN36186369
15761
GCA_031196435.1ScaffoldJAVINF000000000SAMN36186367
15603
GCA_031196405.1ScaffoldJAVING000000000SAMN36186368
15686
GCA_031196365.1ContigJAVINJ000000000SAMN36186371
15858
GCA_031196035.1ScaffoldJAVIOA000000000SAMN36186388
16673
GCA_031196015.1ContigJAVINZ000000000SAMN36186387
16485
GCA_031195995.1ScaffoldJAVIOF000000000SAMN36186393
17092
GCA_031195975.1ScaffoldJAVIOB000000000SAMN36186389
16830
GCA_031195955.1ContigJAVIOC000000000SAMN36186390
16862
GCA_031195935.1ScaffoldJAVIOD000000000SAMN36186391
16902
GCA_031195915.1ScaffoldJAVIOE000000000SAMN36186392
17058
GCA_031195885.1ScaffoldJAVIOH000000000SAMN36186395
17117
GCA_031195875.1ContigJAVIOG000000000SAMN36186394
17115
GCA_031195835.1ScaffoldJAVIOJ000000000SAMN36186397
17169
GCA_031195855.1ContigJAVIOI000000000SAMN36186396
17120
GCA_031195815.1ScaffoldJAVIOK000000000SAMN36186398
17320
GCA_031195785.1ScaffoldJAVIOL000000000SAMN36186399
17343
GCA_031195765.1ContigJAVION000000000SAMN36186401
61
GCA_031195755.1ContigJAVIOM000000000SAMN36186400
57
GCA_031195715.1ContigJAVIOO000000000SAMN36186402
62
GCA_031195725.1ContigJAVIOP000000000SAMN36186403
67
GCA_031195685.1ContigJAVIOQ000000000SAMN36186404
69
GCA_031195675.1ContigJAVIOR000000000SAMN36186405
107
GCA_031196335.1ContigJAVINK000000000SAMN36186372
15869
GCA_031196275.1ScaffoldJAVINL000000000SAMN36186373
15906
GCA_031196255.1ScaffoldJAVINR000000000SAMN36186379
16254
GCA_031196285.1ScaffoldJAVINM000000000SAMN36186374
15927
GCA_031196265.1ScaffoldJAVINN000000000SAMN36186375
16050
GCA_031196235.1ContigJAVINO000000000SAMN36186376
16063
GCA_031196215.1ContigJAVINP000000000SAMN36186377
16130
GCA_031196195.1ScaffoldJAVINQ000000000SAMN36186378
16167
GCA_031196155.1ScaffoldJAVINS000000000SAMN36186380
16284
GCA_031196135.1ScaffoldJAVINV000000000SAMN36186383
16334
GCA_031196115.1ContigJAVINU000000000SAMN36186382
16326
GCA_031196065.1ScaffoldJAVINW000000000SAMN36186384
16358
GCA_031196745.1ScaffoldJAVIMP000000000SAMN36186351
14325
GCA_031197435.1ScaffoldJAVILI000000000SAMN36186318
12054
GCA_031196055.1ScaffoldJAVINX000000000SAMN36186385
16434
GCA_031196355.1ScaffoldJAVINI000000000SAMN36186370
15779
GCA_031196175.1ScaffoldJAVINT000000000SAMN36186381
16294
GCA_031197675.1ScaffoldJAVIKU000000000SAMN36186304
11367
GCA_031197655.1ScaffoldJAVILB000000000SAMN36186311
11520
GCA_031196995.1ScaffoldJAVIMC000000000SAMN36186338
12966
GCA_031196675.1ScaffoldJAVIMT000000000SAMN36186355
14940
GCA_031196095.1ScaffoldJAVINY000000000SAMN36186386
16453
GCA_031193955.1ScaffoldJAVIRA000000000SAMN36186466
B59
GCA_031193995.1ScaffoldJAVIQY000000000SAMN36186464
B56
GCA_031194015.1ScaffoldJAVIQW000000000SAMN36186462
B37
GCA_031193495.1ScaffoldJAVIRT000000000SAMN36186485
F79
GCA_031193465.1ScaffoldJAVIRS000000000SAMN36186484
F35
GCA_031193435.1ScaffoldJAVIRW000000000SAMN36186488
G49
GCA_031193405.1ScaffoldJAVIRX000000000SAMN36186489
G51
GCA_031193375.1ScaffoldJAVIRU000000000SAMN36186486
G15
GCA_031193325.1ScaffoldJAVIRV000000000SAMN36186487
G47
GCA_031193335.1ScaffoldJAVIRY000000000SAMN36186490
G54
GCA_031193965.1ScaffoldJAVIQZ000000000SAMN36186465
B57
GCA_031194025.1ScaffoldJAVIQX000000000SAMN36186463
B40
GCA_031194075.1ScaffoldJAVIQT000000000SAMN36186459
A54
GCA_031194055.1ScaffoldJAVIQU000000000SAMN36186460
A77
GCA_031194145.1ScaffoldJAVIQV000000000SAMN36186461
A9
GCA_031193925.1ScaffoldJAVIRB000000000SAMN36186467
B72
GCA_031193915.1ScaffoldJAVIRH000000000SAMN36186473
C79xiao
GCA_031193885.1ContigJAVIRC000000000SAMN36186468
C22
GCA_031193845.1ScaffoldJAVIRD000000000SAMN36186469
C32
GCA_031193825.1ScaffoldJAVIRF000000000SAMN36186471
C44
GCA_031193815.1ScaffoldJAVIRE000000000SAMN36186470
C34
GCA_031193795.1ScaffoldJAVIRG000000000SAMN36186472
C79da
GCA_031193765.1ScaffoldJAVIRI000000000SAMN36186474
D17
GCA_031193735.1ScaffoldJAVIRJ000000000SAMN36186475
D20
GCA_031193715.1ScaffoldJAVIRO000000000SAMN36186480
D7
GCA_031193675.1ScaffoldJAVIRK000000000SAMN36186476
D31
GCA_031193665.1ScaffoldJAVIRL000000000SAMN36186477
D42
GCA_031193635.1ScaffoldJAVIRN000000000SAMN36186479
D65
GCA_031193605.1ScaffoldJAVIRM000000000SAMN36186478
D43
GCA_031193575.1ScaffoldJAVIRP000000000SAMN36186481
E11
GCA_031193545.1ScaffoldJAVIRR000000000SAMN36186483
E56
GCA_031194095.1ScaffoldJAVIQS000000000SAMN36186458
A32
GCA_031193505.1ScaffoldJAVIRQ000000000SAMN36186482
E49
GCA_031195515.1ContigJAVIOX000000000SAMN36186411
SM17
GCA_031195655.1ContigJAVIOW000000000SAMN36186410
SM15
GCA_031195625.1ScaffoldJAVIOS000000000SAMN36186406
SM1
GCA_031195615.1ScaffoldJAVIOU000000000SAMN36186408
SM11
GCA_031195595.1ContigJAVIOT000000000SAMN36186407
SM10
GCA_031195575.1ScaffoldJAVIOV000000000SAMN36186409
SM12
GCA_031195555.1ContigJAVIOZ000000000SAMN36186413
SM20
GCA_031195535.1ScaffoldJAVIOY000000000SAMN36186412
SM18
GCA_031195155.1ScaffoldJAVIPQ000000000SAMN36186430
SM41
GCA_031195205.1ScaffoldJAVIPR000000000SAMN36186431
SM42
GCA_031195195.1ContigJAVIPN000000000SAMN36186427
SM39
GCA_031195215.1ScaffoldJAVIPM000000000SAMN36186426
SM38
GCA_031195175.1ScaffoldJAVIPP000000000SAMN36186429
SM40
GCA_031195105.1ScaffoldJAVIQQ000000000SAMN36186456
SM45
GCA_031195115.1ScaffoldJAVIPS000000000SAMN36186432
SM43
GCA_031195095.1ScaffoldJAVIPT000000000SAMN36186433
SM44
GCA_031195495.1ScaffoldJAVIPA000000000SAMN36186414
SM21
GCA_031195385.1ScaffoldJAVIPF000000000SAMN36186419
SM30
GCA_031195375.1ContigJAVIPE000000000SAMN36186418
SM3
GCA_031195435.1ContigJAVIPC000000000SAMN36186416
SM26
GCA_031195425.1ContigJAVIPD000000000SAMN36186417
SM29
GCA_031195415.1ContigJAVIPB000000000SAMN36186415
SM22
GCA_031195335.1ScaffoldJAVIPH000000000SAMN36186421
SM32
GCA_031195345.1ScaffoldJAVIPG000000000SAMN36186420
SM31
GCA_031195315.1ScaffoldJAVIPJ000000000SAMN36186423
SM35
GCA_031195295.1ScaffoldJAVIPK000000000SAMN36186424
SM36
GCA_031195255.1ContigJAVIPL000000000SAMN36186425
SM37
GCA_031195275.1ContigJAVIPI000000000SAMN36186422
SM34
GCA_031194585.1ContigJAVIPV000000000SAMN36186435
SM48
GCA_031194575.1ContigJAVIPO000000000SAMN36186428
SM4
GCA_031194545.1ScaffoldJAVIPX000000000SAMN36186437
SM50
GCA_031194535.1ContigJAVIPU000000000SAMN36186434
SM46
GCA_031194515.1ContigJAVIPW000000000SAMN36186436
SM49
GCA_031194495.1ContigJAVIPY000000000SAMN36186438
SM51
GCA_031194435.1ContigJAVIQB000000000SAMN36186441
SM54
GCA_031194445.1ContigJAVIQA000000000SAMN36186440
SM53
GCA_031194455.1ContigJAVIPZ000000000SAMN36186439
SM52
GCA_031194415.1ContigJAVIQC000000000SAMN36186442
SM55
GCA_031194395.1ContigJAVIQD000000000SAMN36186443
SM56
GCA_031194375.1ContigJAVIQE000000000SAMN36186444
SM57
GCA_031194345.1ContigJAVIQF000000000SAMN36186445
SM58
GCA_031194335.1ContigJAVIQG000000000SAMN36186446
SM59
GCA_031194315.1ScaffoldJAVIQN000000000SAMN36186453
SM19
GCA_031194295.1ContigJAVIQH000000000SAMN36186447
SM60
GCA_031194275.1ContigJAVIQI000000000SAMN36186448
SM61
GCA_031194245.1ContigJAVIQJ000000000SAMN36186449
SM7
GCA_031194235.1ContigJAVIQK000000000SAMN36186450
SM8
GCA_031194215.1ContigJAVIQL000000000SAMN36186451
SM9
GCA_031194195.1ScaffoldJAVIQM000000000SAMN36186452
SM6
GCA_031194165.1ScaffoldJAVIQO000000000SAMN36186454
SM23
GCA_031194115.1ScaffoldJAVIQP000000000SAMN36186455
SM27
GCA_031194105.1ScaffoldJAVIQR000000000SAMN36186457
SM47

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