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Accession: PRJNA999493 ID: 999493

Whole Genome sequence of Staphylococcus epidermis from blood-stream infections

to Stay AMR, biocides reduced susceptibility and heavy metal resistance in S. epidermidis
AccessionPRJNA999493
Data TypeGenome sequencing and assembly
ScopeMultispecies
PublicationsAl-Jabri Z et al., "Whole Genome Sequencing of Methicillin-Resistant Staphylococcus epidermidis Clinical Isolates Reveals Variable Composite SCCmec ACME among Different STs in a Tertiary Care Hospital in Oman.", Microorganisms, 2021 Aug 27;9(9)
Grants
  • "Genotypic and phenotypic analysis of copper efflux transporters amongst clinical isolates of Staphylococcus epidermidis associated with bacteremia" (Grant ID RF/MED/MICR/19/02, Deanship of Research)
SubmissionRegistration date: 28-Jul-2023
Sultan Qaboos University
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)22
Publications
PubMed1
PMC1
Other datasets
BioSample24
Assembly22
Assembly details:
Assembly levelNumber of Assemblies
22
22
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_030715635.1ContigJAURRJ000000000SAMN36736254
793
GCA_030715595.1ContigJAURRL000000000SAMN36736252
4231
GCA_030715555.1ContigJAURRN000000000SAMN36736250
4174
GCA_030715545.1ContigJAURRK000000000SAMN36736253
4173
GCA_030716185.1ContigJAURSA000000000SAMN36736236
1080
GCA_030716165.1ContigJAURRW000000000SAMN36736240
3193
GCA_030716135.1ContigJAURRR000000000SAMN36736245
7114
GCA_030716125.1ContigJAURRQ000000000SAMN36736246
2751
GCA_030716105.1ContigJAURRP000000000SAMN36736248
640
GCA_030716085.1ContigJAURRY000000000SAMN36736238
4175
GCA_030716065.1ContigJAURRI000000000SAMN36736255
4561
GCA_030716045.1ContigJAURRO000000000SAMN36736249
1426
GCA_030716025.1ContigJAURRG000000000SAMN36736257
5459
GCA_030716005.1ContigJAURRH000000000SAMN36736256
9407
GCA_030715965.1ContigJAURRX000000000SAMN36736239
60242
GCA_030715975.1ContigJAURRZ000000000SAMN36736237
5034
GCA_030715925.1ContigJAURRU000000000SAMN36736242
2074
GCA_030715875.1ContigJAURRV000000000SAMN36736241
2562
GCA_030716625.1ContigJAURRT000000000SAMN36736243
5426
GCA_030715865.1ContigJAURRS000000000SAMN36736244
5506
GCA_030716565.1ContigJAURRM000000000SAMN36736251
4320
GCA_030715945.1ContigJAURRF000000000SAMN36736259
6982

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