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Organizing biological data

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Select item 12009591.

Enterococcus gallinarum

: Project data type: Genome sequencing

Scope:: Multispecies

Xinjiang Agricultural University

Accession:: PRJNA1200959
ID:: 1200959

Select item 11879812.

Metagenome assembly of PRJEB63360 data set (The workers’ microbiomes are the main route of dispersion of antimicrobial resistance from the food system to the human local population.)

: Project data type: Genome sequencing

Scope:: Monoisolate

EMG

Accession:: PRJEB82468
ID:: 1187981

Select item 11858953.

A multi-omics approach to investigate the oral and gut microbiome across fermented food consuming ethnic population of Sikkim linking to immunomodulation and Helicobacter pylori infection

: Project data type: Raw sequence reads

Scope:: Multispecies

National Agri-Food Biotechnology Institute (NABI)

Accession:: PRJNA1185895
ID:: 1185895

Select item 11628584.

Enterococcus spp in 2023-2024 from Zhejiang, China Genome sequencing and assembly

: Project data type: Genome sequencing

Scope:: Multispecies

University of Chinese Academy of Sciences

Accession:: PRJNA1162858
ID:: 1162858

Select item 11591015.

optrA-positive Enterococcus and optrA-negative Enterococcus from community population in China

: Project data type: Genome sequencing

Scope:: Multispecies

Shenzhen Centre for Disease Control and Prevention

Accession:: PRJNA1159101
ID:: 1159101

Select item 11544476.

Microorganisms in pickle

: Project data type: Raw sequence reads

Scope:: Multispecies

Zhejiang University of Technology

Accession:: PRJNA1154447
ID:: 1154447

Select item 11529127.

Enterococcus gallinarum strain:IFEGHNEK1

Enterococcus gallinarum strain:IFEGHNEK1 Genome sequencing

Taxonomy:: Enterococcus gallinarum

: Project data type: Genome sequencing

Scope:: Other

ICAR-Central Inland Fisheries Research Institute

Accession:: PRJNA1152912
ID:: 1152912

Select item 11296728.

in vitro activity of contezolid against drug-resistant Enterococcus

: Project data type: Genome sequencing

Scope:: Multispecies

Peking Union Medical College Hospital

Accession:: PRJNA1129672
ID:: 1129672

Select item 11211919.

linezolid resistance gene reservoirs in hospital sewages

: Project data type: Genome sequencing

Scope:: Multispecies

The Second Affiliated Hospital of Zhejiang University School of Medicine, Zhejiang University

Accession:: PRJNA1121191
ID:: 1121191

Select item 109413010.

Baseline Aging

Metabolic modeling reveals the aging-associated decline of host-microbiome metabolic interactions in mice

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Christian-Albrechts-University Kiel

Accession:: PRJEB73981
ID:: 1094130

Select item 109346511.

gut bacteria

human gut bacterial isolate genomes Genome sequencing and assembly

: Project data type: Genome sequencing

Scope:: Multispecies

Icahn School of Medicine at Mount Sinai

Accession:: PRJNA1093465
ID:: 1093465

Select item 109296112.

Whole genom sequencing of microorganisms collected by LTC

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

ATA BIO TEKNOLOJI ILAC SANAYI VE TICARET LTD. STI

Accession:: PRJNA1092961
ID:: 1092961

Select item 109131913.

Genome sequencing and assembly of Mouse Gut Bacterial Collection (mGBC)

: Project data type: Genome sequencing

Scope:: Multispecies

Nanjing University

Accession:: PRJNA1091319
ID:: 1091319

Select item 109070614.

Enterococcus gallinarum strain:EGPS1 | isolate:EGPS1

Enterococcus gallinarum strain:EGPS1 | isolate:EGPS1 Genome sequencing and assembly

Taxonomy:: Enterococcus gallinarum

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

ICAR RC NEH, Umiam

Accession:: PRJNA1090706
ID:: 1090706

Select item 108550315.

Evaluation of Antimicrobial resistance determined in clinical isolates of Enterococcus spp. obtained from hospital patients in Latvia

: Project data type: Raw sequence reads

Scope:: Multispecies

Institute of Food safety, Animal Health and Environment "BIOR"

Accession:: PRJNA1085503
ID:: 1085503

Select item 108447616.

Fourier-transform infrared spectroscopy for typing of vancomycin-resistant Enterococcus faecium: performance analysis and outbreak investigation

FTIR for VRE

: Project data type: Other

Scope:: Monoisolate

University of Zurich

Accession:: PRJEB72407
ID:: 1084476

Select item 108031317.

Integrating metagenomic and isolation strategies revealed the first profiles of pathogenesis and resistome on pork surface

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

City University of Hong Kong

Accession:: PRJNA1080313
ID:: 1080313

Select item 106257918.

Accurate identification of Enterococcus lactis causing bacteraemia

: Project data type: Raw sequence reads

Scope:: Multispecies

Murdoch University

Accession:: PRJNA1062579
ID:: 1062579

Select item 105240319.

Pacbio SMRT sequencing of gut microbime of T2D patients

: Project data type: Genome sequencing

Scope:: Multispecies

Institute of Microbiology, Chinese Academy of Sciences

Accession:: PRJNA1052403
ID:: 1052403

Select item 101468920.

Multidrug-resistant organisms in multiple recurrent Clostridioides difficile infected patients treated with faecal microbiota transplantation

Multidrug-resistant organisms cultured from pre- and post-faecal microbiota transplantation patient stools

: Project data type: Other

Scope:: Monoisolate

Netherlands Donor Feces Bank

Accession:: PRJEB64622
ID:: 1014689

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