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Accession: PRJEB38489 ID: 641312

ROAR

AccessionPRJEB38489
Data TypeGenome sequencing and assembly
ScopeMonoisolate
SubmissionRegistration date: 23-Jun-2020
UMR 1137 IAME
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)30985
WGS master74
SRA Experiments117
Other datasets
BioSample137
Assembly74
Assembly details:
Assembly levelNumber of Assemblies
74
74
AssemblyLevelWGSBioSampleInfraspecies IdTaxonomy
GCA_948143945.1ContigCANUGI000000000SAMEA8918992
ROAR-342 / O6:H31 / fimH2 / 127 (ST Warwick)
GCA_948144395.1ContigCANUHJ000000000SAMEA8919050
ROAR-414 / O19:H4 / fimH54 / 405 (ST Warwick)
GCA_948144405.1ContigCANUGY000000000SAMEA8919014
ROAR-368 / O8:H8 / fimH1210 / 1071 (ST Warwick)
GCA_948143885.1ContigCANUFW000000000SAMEA8919003
ROAR-356 / O18:H7 / fimH15 / 95 (ST Warwick)
GCA_948144285.1ContigCANUGX000000000SAMEA8919018
ROAR-372 / O54:H45 / fimH5 / 491 (ST Warwick)
GCA_948144045.1ContigCANUFQ000000000SAMEA8919021
ROAR-375 / O10:H4 / fimH168 / 10 (ST Warwick)
GCA_948144955.1ContigCANUGM000000000SAMEA8918994
ROAR-345 / O146:H10 / fimH32 / - (ST Warwick)
GCA_948144635.1ContigCANUGB000000000SAMEA8919057
ROAR-422 / O183:H18 / fimH97 / 657 (ST Warwick)
GCA_948144275.1ContigCANUGA000000000SAMEA8919033
ROAR-396 / O23:H15 / fimH48 / 70 (ST Warwick)
GCA_948144455.1ContigCANUHE000000000SAMEA8919028
ROAR-389 / O83:H33 / fimH13 / 567 (ST Warwick)
GCA_948145025.1ContigCANUGH000000000SAMEA8919024
ROAR-381 / O2:H48 / fimH1515 / 10 (ST Warwick)
GCA_948144435.1ContigCANUGJ000000000SAMEA8919001
ROAR-354 / O53:H56 / fimH625 / 8819 (ST Warwick)
GCA_948144475.1ContigCANUFO000000000SAMEA8919064
ROAR-433 / O82:H31 / fimH25 / 1297 (ST Warwick)
GCA_948144815.1ContigCANUHB000000000SAMEA8918996
ROAR-348 / O17:H18 / fimH27 / 69 (ST Warwick)
GCA_948144425.1ContigCANUGR000000000SAMEA8919039
ROAR-403 / O146:H21 / fimH32 / 829 (ST Warwick)
GCA_948144515.1ContigCANUHF000000000SAMEA8919012
ROAR-366 / Unknown:H12 / fimH27 / 1075 (ST Warwick)
GCA_948144415.1ContigCANUHD000000000SAMEA8919025
ROAR-383 / O4:H4 / fimH24 / 1072 (ST Warwick)
GCA_948144105.1ContigCANUGG000000000SAMEA8919047
ROAR-411 / O28ab:H9 / fimH24 / 10 (ST Warwick)
GCA_948144735.1ContigCANUGD000000000SAMEA8919055
ROAR-420 / O15:H33 / fimH41 / 93 (ST Warwick)
GCA_948144605.1ContigCANUGV000000000SAMEA8919058
ROAR-425 / O23:H4 / fimH123 / 1882 (ST Warwick)
GCA_948144575.1ContigCANUFP000000000SAMEA8919065
ROAR-434 / O183:H18 / fimH97 / 657 (ST Warwick)
GCA_948144315.1ContigCANUHO000000000SAMEA8919010
ROAR-364 / O2:H4 / fimH30 / 95 (ST Warwick)
GCA_948144565.1ContigCANUFR000000000SAMEA8919067
ROAR-436 / O1:H7 / fimH30 / 95 (ST Warwick)
GCA_948144505.1ContigCANUHH000000000SAMEA8919009
ROAR-363 / O126:H14 / fimH1027 / 1065 (ST Warwick)
GCA_948144325.1ContigCANUGE000000000SAMEA8919052
ROAR-416 / O18:H7 / fimH15 / 95 (ST Warwick)
GCA_948144095.1ContigCANUFS000000000SAMEA8919040
ROAR-404 / O117:H40 / fimH24 / 10 (ST Warwick)
GCA_948145015.1ContigCANUHI000000000SAMEA8919007
ROAR-361 / O40:H12 / ND / 399 (ST Warwick)
GCA_948144615.1ContigCANUGN000000000SAMEA8918997
ROAR-349 / O1:H7 / fimH41 / 59 (ST Warwick)
GCA_948144825.1ContigCANUGC000000000SAMEA8919026
ROAR-386 / O45:H7 / fimH54 / 95 (ST Warwick)
GCA_948143755.1ContigCANUFT000000000SAMEA8919005
ROAR-358 / O75:H5 / fimH422 / 1064 (ST Warwick)
GCA_948144135.1ContigCANUFM000000000SAMEA8919068
ROAR-437 / O88:H6 / fimH54 / 10 (ST Warwick)
GCA_948144355.1ContigCANUGZ000000000SAMEA8919022
ROAR-377 / O2:H4 / fimH27 / 95 (ST Warwick)
GCA_948144495.1ContigCANUFY000000000SAMEA8919042
ROAR-406 / O132:H28 / fimH54 / 1078 (ST Warwick)
GCA_948144155.1ContigCANUHC000000000SAMEA8919004
ROAR-357 / O7:H45 / fimH44 / 62 (ST Warwick)
GCA_948144485.1ContigCANUHK000000000SAMEA8919032
ROAR-395 / O12:H4 / fimH27 / 10 (ST Warwick)
GCA_948144005.1ContigCANUHN000000000SAMEA8919038
ROAR-402 / O6:H1 / fimH10 / 73 (ST Warwick)
GCA_948143935.1ContigCANUFV000000000SAMEA8919046
ROAR-410 / O11:H25 / fimH34 / 58 (ST Warwick)
GCA_948144775.1ContigCANUGW000000000SAMEA8919000
ROAR-352 / Onovel6:H2 / fimH39 / 67 (ST Warwick)
GCA_948144115.1ContigCANUGL000000000SAMEA8919036
ROAR-400 / O8:H25 / fimH32 / 58 (ST Warwick)
GCA_948144585.1ContigCANUGK000000000SAMEA8919060
ROAR-428 / O112:H2 / fimH25 / 388 (ST Warwick)
GCA_948144075.1ContigCANUFU000000000SAMEA8919035
ROAR-398 / O12:H4 / fimH27 / 10 (ST Warwick)
GCA_948144225.1ContigCANUGF000000000SAMEA8919053
ROAR-417 / O101:H9 / fimH54 / 10 (ST Warwick)
GCA_948144855.1ContigCANUHA000000000SAMEA8919002
ROAR-355 / O18:H7 / fimH15 / 95 (ST Warwick)
GCA_948143685.1ContigCANUFN000000000SAMEA8919017
ROAR-371 / O148:H8 / fimH31 / 448 (ST Warwick)
GCA_948144235.1ContigCANUFZ000000000SAMEA8919031
ROAR-394 / O5:H10 / ND / - (ST Warwick)
GCA_948144525.1ContigCANUGU000000000SAMEA8918990
ROAR-340 / O129:H4 / fimH21 / 357 (ST Warwick)
GCA_910595065.1ContigCAJVBV000000000SAMEA8946466
ROAR-069 / O151/O118:H28 / fimH31 / 4225 (ST Warwick)
GCA_910594965.1ContigCAJVBX000000000SAMEA8946471
ROAR-195 / O117:H7 / fimH221 / 7459 (ST Warwick)
GCA_910595015.1ContigCAJVCC000000000SAMEA8946465
ROAR-059 / O17:H31 / fimH426 / 3774 (ST Warwick)
GCA_910594955.1ContigCAJVBZ000000000SAMEA8946473
ROAR-274 / O114:H18 / fimH31 / 11647 (ST Warwick)
GCA_910595075.1ContigCAJVBW000000000SAMEA8946474
ROAR-290 / O128:H34 / fimH167 / 11649 (ST Warwick)
GCA_910594925.1ContigCAJVBY000000000SAMEA8946472
ROAR-221 / O9:H31 / fimH426 / 11655 (ST Warwick)
GCA_910595035.1ContigCAJVBS000000000SAMEA8946467
ROAR-109 / O133:H29 / fimH31 / 1204 (ST Warwick)
GCA_910594975.1ContigCAJVCB000000000SAMEA8946468
ROAR-131 / O115:H18 / fimH27 / 350 (ST Warwick)
GCA_910594905.1ContigCAJVBU000000000SAMEA8946469
ROAR-134 / O87:H19 / fimH124-like / 1265 (ST Warwick)
GCA_910594935.1ContigCAJVCA000000000SAMEA8946470
ROAR-187 / Oneg:H28 / fimH331 / 137 (ST Warwick)
GCA_910592795.1ContigCAJUZS000000000SAMEA8919074
ROAR-020 / O53:H15 / fimH31 / 11644 (ST Warwick)
GCA_910592755.1ContigCAJVAC000000000SAMEA8919071
ROAR-010 / O154:H31 / fimH31 / 4296 (ST Warwick)
GCA_910592855.1ContigCAJVAB000000000SAMEA8919078
ROAR-036 / O39:H18 / fimH31 / 11641 (ST Warwick)
GCA_910592835.1ContigCAJUZU000000000SAMEA8919073
ROAR-016 / Onovel2:H9 / fimH31 / 11652 (ST Warwick)
GCA_910592735.1ContigCAJUZZ000000000SAMEA8919076
ROAR-029 / O44/O38:H39 / fimH30 / 9312 (ST Warwick)
GCA_910592775.1ContigCAJUZT000000000SAMEA8918989
ROAR-387 / Onovel21:H39 / fimH562 / 6646 (ST Warwick)
GCA_910592685.1ContigCAJUZY000000000SAMEA8919079
ROAR-038 / O65:H48 / fimH31 / 11648 (ST Warwick)
GCA_910592715.1ContigCAJVAE000000000SAMEA8919072
ROAR-012 / O112:H32 / fimH393 / 11581 (ST Warwick)
GCA_910592805.1ContigCAJVAA000000000SAMEA8919075
ROAR-023 / O162:H42 / fimH370-like / 2716 (ST Warwick)
GCA_910592675.1ContigCAJVAD000000000SAMEA8919077
ROAR-030 / O2:H49 / fimH31 / 8508 (ST Warwick)
GCA_939535315.1ContigCALNEA000000000SAMEA8919069
ROAR-440 / Onovel10:O92 / fimH1284 / 115 (ST Warwick)
GCA_939535325.1ContigCALNDZ000000000SAMEA8918993
Faeces
GCA_903932125.1ContigCAIZFA000000000SAMEA6967828
O130:H56 / fimH160 / 4104 (ST Warwick) / clade V
GCA_903932105.1ContigCAIZEY000000000SAMEA6967830
O10:H52 / fimH612 / 2371 (ST Warwick) / clade III
GCA_903932005.1ContigCAIZEQ000000000SAMEA6967827
Unknown:H5 / ND / 5362 (ST Warwick) / clade II
GCA_903932115.1ContigCAIZEX000000000SAMEA6967832
O109:H45 / fimH1039 / 10431 (ST Warwick) / B2
GCA_903932085.1ContigCAIZFB000000000SAMEA6967829
O129:H20 / fimH1029 / 8825 (ST Warwick) / E or clade I
GCA_903932095.1ContigCAIZEZ000000000SAMEA6967831
O134:Unknown / ND / 10187 (ST Warwick) / fergusonii
SRA Data Details
ParameterValue
Data volume, Gbases46
Data volume, Mbytes18555

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