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Accession: PRJNA517196 ID: 517196

Pediococcus acidilactici

Genomics of lactic acid bacteria isolated from European badgers

The aim of this study was to evaluate the potential of Lactic Acid Bacteria (LAB) isolated from badgers as probiotics in wildlife. More...

Accession	PRJNA517196
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Stedman A et al., "Lactic acid Bacteria isolated from European badgers (Meles meles) reduce the viability and survival of Bacillus Calmette-Guerin (BCG) vaccine and influence the immune response to BCG in a human macrophage model.", BMC Microbiol, 2018 Jul 13;18(1):74
Submission	Registration date: 25-Jan-2019 University of Surrey
Relevance	Probiotics

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	12
SRA Experiments	12
Publications
PubMed	1
PMC	1
Other datasets
BioSample	12
Assembly	12

Assembly details:

Assembly level

Number of Assemblies

Contig

12
12

Assembly	Level	WGS	BioSample	Strain	Taxonomy
GCA_011009735.1		SDQZ00000000	SAMN10822527	C34	Enterococcus faecalis
GCA_011009825.1		SDRA00000000	SAMN10822526	A7	Enterococcus faecalis
GCA_011009755.1		SDQY00000000	SAMN10822528	P5	Lactiplantibacillus plantarum
GCA_011009765.1		SDQX00000000	SAMN10822529	D4	Limosilactobacillus reuteri
GCA_011009585.1		SDQT00000000	SAMN10822533	M16	Pediococcus acidilactici
GCA_011009715.1		SDQV00000000	SAMN10822531	F7	Pediococcus acidilactici
GCA_011009695.1		SDQW00000000	SAMN10822530	E24	Pediococcus acidilactici
GCA_011009675.1		SDQU00000000	SAMN10822532	I32	Pediococcus acidilactici
GCA_011009615.1		SDQS00000000	SAMN10822534	B4	Pediococcus pentosaceus
GCA_011009635.1		SDQR00000000	SAMN10822535	A23	Weissella cibaria
GCA_011009625.1		SDQQ00000000	SAMN10822536	A37	Weissella paramesenteroides
GCA_011009575.1		SDQP00000000	SAMN10822537	N43	Weissella paramesenteroides

SRA Data Details

Parameter	Value
Data volume, Gbases	2
Data volume, Mbytes	1349

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Pediococcus acidilactici
Pediococcus acidilactici
Genomics of lactic acid bacteria isolated from European badgers

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