U.S. flag

An official website of the United States government

Display Settings:

Format

Send to:

Choose Destination
Accession: PRJNA541552 ID: 541552

Enterococcus faecium and Enterococcus faecalis isolates from beef packing plants and retail meat

Enterococcus faecium and Enterococcus faecalis were isolated from various points in a beef packing plant and from retail meat and sequenced.
AccessionPRJNA541552
Data TypeGenome sequencing and assembly
ScopeMultispecies
Publications
  • Published online: Holman D et al., "Draft Genome Sequences of 43 Enterococcus faecalis and Enterococcus faecium Isolates from a Commercial Beef Processing Plant and Retail Ground Beef", Microbiology Resource Announcements, 2019;8(42)
  • Published online: Holman D et al., "Antimicrobial Resistance in Enterococcus Spp. Isolated from a Beef Processing Plant and Retail Ground Beef", Microbiology Spectrum, 2021;9(3)
SubmissionRegistration date: 7-May-2019
Agriculture and Agri-Food Canada
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)3468
WGS master55
SRA Experiments55
Protein Sequences119428
Other datasets
BioSample55
Assembly55
Assembly details:
Assembly levelNumber of Assemblies
55
55
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_006541115.1ContigVHRL00000000SAMN12082484
H74
GCA_006541095.1ContigVHRO00000000SAMN12082481
H22
GCA_006541085.1ContigVHRD00000000SAMN12082492
R43E
GCA_006541075.1ContigVHSC00000000SAMN12082467
C144
GCA_006541885.1ContigVHQP00000000SAMN12082506
W84
GCA_006541905.1ContigVHRU00000000SAMN12082475
G81
GCA_006541875.1ContigVHQQ00000000SAMN12082505
W19
GCA_006541855.1ContigVHQZ00000000SAMN12082496
R51
GCA_006541785.1ContigVHRA00000000SAMN12082495
R50
GCA_006541795.1ContigVHQY00000000SAMN12082497
R52
GCA_006541805.1ContigVHRN00000000SAMN12082482
H4
GCA_006541775.1ContigVHRE00000000SAMN12082491
R37
GCA_006541755.1ContigVHRS00000000SAMN12082477
H102
GCA_006541705.1ContigVHRF00000000SAMN12082490
R30
GCA_006541715.1ContigVHRC00000000SAMN12082493
R49
GCA_006541655.1ContigVHQX00000000SAMN12082498
R53
GCA_006541595.1ContigVHQV00000000SAMN12082500
R7
GCA_006541445.1ContigVHQT00000000SAMN12082502
W133
GCA_006541545.1ContigVHRG00000000SAMN12082489
R29
GCA_006541525.1ContigVHQW00000000SAMN12082499
R5E
GCA_006541515.1ContigVHQU00000000SAMN12082501
W100
GCA_006541465.1ContigVHRT00000000SAMN12082476
G85
GCA_006541435.1ContigVHQO00000000SAMN12082507
W97
GCA_006541405.1ContigVHRW00000000SAMN12082473
G42
GCA_006541335.1ContigVHRY00000000SAMN12082471
G138E
GCA_006541345.1ContigVHRX00000000SAMN12082472
G149
GCA_006541395.1ContigVHSD00000000SAMN12082466
C138
GCA_006541295.1ContigVHRZ00000000SAMN12082470
G127E
GCA_006541355.1ContigVHRV00000000SAMN12082474
G69E
GCA_006541305.1ContigVHSB00000000SAMN12082468
C146
GCA_006541255.1ContigVHRK00000000SAMN12082485
H96E
GCA_006541265.1ContigVHRP00000000SAMN12082480
H136
GCA_006541225.1ContigVHSA00000000SAMN12082469
G109
GCA_006541215.1ContigVHSE00000000SAMN12082465
C112
GCA_006541155.1ContigVHRI00000000SAMN12082487
R20
GCA_006541185.1ContigVHRM00000000SAMN12082483
H44
GCA_017939185.1ContigJAGLAT000000000SAMN18529538
G133
GCA_017939215.1ContigJAGLBN000000000SAMN18529544
R48
GCA_017939585.1ContigJAGLAP000000000SAMN18529543
R42
GCA_017942585.1ContigJAGLAW000000000SAMN18529535
G90
GCA_017942445.1ContigJAGLAY000000000SAMN18529533
C15
GCA_017942435.1ContigJAGLAS000000000SAMN18529539
G140
GCA_017942425.1ContigJAGLAQ000000000SAMN18529542
R1E
GCA_017942395.1ContigJAGLAX000000000SAMN18529534
C116
GCA_017942385.1ContigJAGLAR000000000SAMN18529540
H11
GCA_017942365.1ContigJAGLAU000000000SAMN18529537
G119
GCA_017942335.1ContigJAGLAV000000000SAMN18529536
G92
GCA_006541175.1ContigVHRR00000000SAMN12082478
H112E
GCA_006541485.1ContigVHQR00000000SAMN12082504
W148
GCA_006541535.1ContigVHRQ00000000SAMN12082479
H134E
GCA_006541615.1ContigVHRJ00000000SAMN12082486
R2
GCA_006541625.1ContigVHQS00000000SAMN12082503
W141
GCA_006541685.1ContigVHRB00000000SAMN12082494
R4E
GCA_006541645.1ContigVHRH00000000SAMN12082488
R26E
GCA_017942505.1ContigJAGMTW000000000SAMN18529541
H53
SRA Data Details
ParameterValue
Data volume, Gbases21
Data volume, Mbytes11699

Supplemental Content

Recent activity

    Your browsing activity is empty.

    Activity recording is turned off.

    Turn recording back on

    See more...
    Support Center