We have sequenced and generated genome assemblies and annotation for a set of rodent malaria species. The genomes are draft assembled and automatically annotated and will contain potential errors.
| Accession | PRJEB12003 |
| Type | Umbrella project |
| Submission | Registration date: 6-Dec-2015
WELLCOME SANGER INSTITUTE |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 2746 |
| WGS master | 9 |
| Genomic DNA | 134 |
| SRA Experiments | 65 |
| Protein Sequences | 45626 |
| Other datasets |
| BioSample | 31 |
| Assembly | 9 |
Rodent malaria genome project encompasses the following 8 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes |
1
|
BioProject
accession | Assembly
level | Name | Title |
|---|
| PRJEB11993 | Chromosomes | Genomes of P. chabaudi and P. berghei | Draft assembly and annotation of Plasmodium chabaudi and Plasmodium berghei genomes (WELLCOME SANGER INSTITUTE) |
|
| Other | 7 |
BioProject
accession | Name | Title |
|---|
| PRJEB2235 | Genetic diversity of P. berghei strains with different defined phenotypes | Genetic diversity of P. berghei strains with different defined phenotypes (Wellcome Sanger Institute) | | PRJEB2509 | Genome_re_sequencing_of_Plasmodium_chabaudi_clones__ | Genome_re_sequencing_of_Plasmodium_chabaudi_clones__ (Wellcome Sanger Institute) | | PRJEB2037 | Plasmodium chabaudi | WGS of P. chabaudi chabaudi AS clone (Wellcome Sanger Institute) | | PRJEB2811 | Plasmodium_berghei_diversity_and_history___whole_genome_sequencing_of_phenotypically_diverse_laboratory_lines | Plasmodium_berghei_diversity_and_history___whole_genome_sequencing_of_phenotypically_diverse_laboratory_lines (Wellcome Sanger Institute) | | PRJEB2114 | WGS of P. berghei ANKA clone | WGS of P. berghei ANKA clone (Wellcome Sanger Institute) |
List all 7 'Other' projects...BioProject
accession | Name | Title |
|---|
| PRJEB2235 | Genetic diversity of P. berghei strains with different defined phenotypes | Genetic diversity of P. berghei strains with different defined phenotypes (Wellcome Sanger Institute) | | PRJEB2509 | Genome_re_sequencing_of_Plasmodium_chabaudi_clones__ | Genome_re_sequencing_of_Plasmodium_chabaudi_clones__ (Wellcome Sanger Institute) | | PRJEB2037 | Plasmodium chabaudi | WGS of P. chabaudi chabaudi AS clone (Wellcome Sanger Institute) | | PRJEB2811 | Plasmodium_berghei_diversity_and_history___whole_genome_sequencing_of_phenotypically_diverse_laboratory_lines | Plasmodium_berghei_diversity_and_history___whole_genome_sequencing_of_phenotypically_diverse_laboratory_lines (Wellcome Sanger Institute) | | PRJEB2114 | WGS of P. berghei ANKA clone | WGS of P. berghei ANKA clone (Wellcome Sanger Institute) | | PRJEB2259 | Whole genome sequencing (WGS) of Plasmodium yoelii YM | Whole genome sequencing (WGS) of Plasmodium yoelii YM (Wellcome Sanger Institute) | | PRJEB2611 | Whole_Genome_Sequencing_of_Plasmodium_yoelii_17X | Whole_Genome_Sequencing_of_Plasmodium_yoelii_17X (Wellcome Sanger Institute) |
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