ID 720569 - BioProject

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Accession: PRJNA720569 ID: 720569

The California Conservation Genomics Project (CCGP)

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This project is a component of the Earth BioGenome Project (EBP)

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40 additional projects are components of the Earth BioGenome Project (EBP).

The goal of the CCGP is to generate high quality reference genomes coupled with whole genome resequencing of hundreds of species across the range of the state of California. These data will be used to generate guidance on habitat acquisition and restoration in order to help protect the habitats and populations of threatened, endangered and exploited species.

Accession	PRJNA720569
Type	Umbrella project
Grants	"The California Conservation Genomics Project" (Grant ID RSI-19-690224, State of California, UC Office of the President)
Submission	Registration date: 8-Apr-2021 UCLA
Related Resources	The California Conservation Genomics Project (CCGP)
Relevance	Ecology, Conservation

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	732091
WGS master	256
Genomic DNA	3
Transcript	718218
SRA Experiments	1961
Protein Sequences	618179
Publications
PubMed	41
PMC	38
Other datasets
BioSample	1397
Assembly	257

SRA Data Details

Parameter	Value
Data volume, Gbases	30,308
Data volume, Tbytes	12.76

This project encompasses the following 148 sub-projects:

Project Type

Number of Projects

Genome sequencing

Highest level of assembly :

SRA or Trace

BioProject accession	Assembly level	Name	Title
PRJNA919063	SRA or Trace	Reference genome of stinkwort, Dittrichia graveolens (L.) Greuter	Reference genome of stinkwort, Dittrichia graveolens (L.) Greuter (University of California,...)

Umbrella project

147

BioProject accession	Organism	Title
PRJNA766244	Acarospora	Acarospora spp. Genomic Resources (University of California,...)
PRJNA766245	Acmispon	Acmispon spp. Genomic Resources (University of California,...)
PRJNA763234	Actinemys	Actinemys spp. Genomic resources (UCLA)
PRJNA766258	Agelaius sp.	Agelaius spp. Genomic Resources (University of California,...)
PRJNA766259	Anastrepha	Anastrepha spp. Genomic Resources (University of California,...)

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The California Conservation Genomics Project (CCGP)

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