"Bioplatforms Australia (https://bioplatforms.com/) is a non-profit organisation that supports Australian Life science research by investing in state-of-the-art infrastructure and expertise in genomics, proteomics, metabolomics and bioinformatics. This is made possible through investment funding provided by the Commonwealth Government National Collaborative Research Infrastructure Strategy (NCRIS). Our mission is to enhance these research capabilities, support innovation and help transform scientific outcomes into tangible benefits for Australians..
We develop scientific initiatives and collaborations of national significance across medicine, agriculture and environmental science. Transformative research projects supported by Bioplatforms Australia are diverse and range from the first ever sequencing of the Australian koala genome, a systematic coverage of Australian native vertebrates and native flora, agriculture-linked plants and pathogens and the world’s largest coral genomics sequencing project on the Great Barrier Reef."
Project Data:
Resource Name | Number of Links |
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Sequence data |
Nucleotide (total) | 57560 |
WGS master | 479 |
Genomic DNA | 133 |
Transcript | 48414 |
SRA Experiments | 48315 |
Protein Sequences | 201702 |
Publications |
PubMed | 9 |
PMC | 4 |
Other datasets |
BioSample | 13395 |
GEO DataSets | 3 |
PopSet | 2 |
Assembly | 505 |
This project encompasses the following 17 sub-projects:
Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Scaffolds Contigs Total | 2 2 4
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BioProject accession | Assembly level | Name | Title |
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PRJEB24695 | Scaffolds | Cane Toad (Rhinella marina) genome project | De novo whole genome sequencing and assembly of the invasive cane toad, Rhinella marina (UNIVERSITY OF NEW SOUTH WALES) | PRJNA12587 | Contigs | Notamacropus eugenii | tammar wallaby genome sequencing project (Tammar Wallaby Genome Sequencing...) | PRJNA359763 | Scaffolds | Phascolarctos cinereus | Phascolarctos cinereus isolate:Bilbo 61053 Genome sequencing and assembly (The Earlham Institute) | PRJNA399599 | Contigs | Vitis vinifera | Vitis vinifera cultivar:Chardonnay Genome sequencing and assembly (Australian Wine Research...) |
|
Umbrella project | 13 |
BioProject accession | Name | Title |
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PRJNA1098045 | Antibiotic Resistant Pathogens (Sepsis) | Antibiotic Resistant Pathogens (Sepsis) (Bioplatforms Australia) | PRJNA1075730 | Australian Amphibian and Reptile Genomics (ARG) | Australian Amphibian and Reptile Genomics (ARG) (Bioplatforms Australia) | PRJNA1098052 | Australian Avian Genomics Initiative (AVI) | Australian Avian Genomics Initiative (AVI) (Bioplatforms Australia) | PRJNA1098053 | Australian Fish Genomics Initiative (FISH) | Australian Fish Genomics Initiative (FISH) (Bioplatforms Australia) | PRJNA1098046 | Australian Functional Fungi Initiative (FFI) | Australian Functional Fungi Initiative (FFI) (Bioplatforms Australia) | List all 13 'Umbrella project' projects...BioProject accession | Name | Title |
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PRJNA1098045 | Antibiotic Resistant Pathogens (Sepsis) | Antibiotic Resistant Pathogens (Sepsis) (Bioplatforms Australia) | PRJNA1075730 | Australian Amphibian and Reptile Genomics (ARG) | Australian Amphibian and Reptile Genomics (ARG) (Bioplatforms Australia) | PRJNA1098052 | Australian Avian Genomics Initiative (AVI) | Australian Avian Genomics Initiative (AVI) (Bioplatforms Australia) | PRJNA1098053 | Australian Fish Genomics Initiative (FISH) | Australian Fish Genomics Initiative (FISH) (Bioplatforms Australia) | PRJNA1098046 | Australian Functional Fungi Initiative (FFI) | Australian Functional Fungi Initiative (FFI) (Bioplatforms Australia) | PRJNA597010 | Australian Microbiome | Australian Microbiome (CSIRO) | PRJNA1075727 | Genomics for Australian Plants (GAP) | Genomics for Australian Plants (GAP) (Bioplatforms Australia) | PRJNA1075702 | Great Barrier Reef - SeaQuence project | Great Barrier Reef - SeaQuence project (Bioplatforms Australia) | PRJNA1098055 | Integrated Pest Management Omics Initiative | Integrated Pest Management Omics Initiative (Bioplatforms Australia) | PRJNA1075707 | Oz Mammals Genomics (OMG) | Oz Mammals Genomics (OMG) (Bioplatforms Australia) | PRJNA1098054 | Plant Pathogen Initiative (PP) | Plant Pathogen Initiative (PP) (Bioplatforms Australia) | PRJNA1098056 | Plant Protein Atlas (PPA) | Plant Protein Atlas (PPA) (Bioplatforms Australia) | PRJNA1075750 | Threatened Species Initiative (TSI) | Threatened Species Initiative (TSI) (Bioplatforms Australia) | Less... |