This study is based on two microarray datasets, in one hand a phase transition comparison using the expression profiles of 630E strain after 4h and 10h of growth. In other hand a comparison at 10h of growth between a mutant of the sigH gene and the WT strains. This experimental procedure was designed to investigate the effect of sigH in the growth phase transition of Clostridium difficile.
This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA133985; GEO: GSE25521 |
| Type | Umbrella project |
| Publications | Saujet L et al., "The key sigma factor of transition phase, SigH, controls sporulation, metabolism, and virulence factor expression in Clostridium difficile.", J Bacteriol, 2011 Jul;193(13):3186-96 |
| Submission | Registration date: 22-Aug-2011
Laboratoire Pathogenese des Bacteries Anaerobies, Microbiologie, Institut Pasteur |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| GEO DataSets | 3 |
GEO Data Details| Parameter | Value |
|---|
| Data volume, Spots | 125952 |
| Data volume, Processed Mbytes | 4 |
| Data volume, Supplementary Mbytes | 12 |
This project encompasses the following 2 sub-projects:
| Project Type | Number of Projects |
| Transcriptome or Gene expression | 2 |
|