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Accession: PRJNA557557 ID: 557557

Hydrothermal sulfide chimneys metagenome

Hydrothermal sulfide chimneys metagenomic assembly

Deep-sea hydrothermal vents are characterized as one of most productive ecosystems on Earth, that supported by highly diversified uncultured microorganisms. More...
AccessionPRJNA557557
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismhydrothermal vent metagenome[Taxonomy ID: 652676]
unclassified sequences; metagenomes; ecological metagenomes; hydrothermal vent metagenome
PublicationsHou J et al., "Microbial succession during the transition from active to inactive stages of deep-sea hydrothermal vent sulfide chimneys.", Microbiome, 2020 Jun 30;8(1):102
SubmissionRegistration date: 22-May-2020
Lab of Microbial Oceanography
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)173
Publications
PubMed1
PMC1
Other datasets
BioSample173
Assembly173
Assembly details:
Assembly levelNumber of Assemblies
101
72
173
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_013152925.1ScaffoldJAADFK000000000SAMN12405801
M_MaxBin.023
GCA_013152895.1ScaffoldJAADFN000000000SAMN12405802
M_MaxBin.030
GCA_013152385.1ScaffoldJAADGL000000000SAMN12405723
M_MetaBat.117
GCA_013151025.1ScaffoldJAADJC000000000SAMN12405724
M_MetaBat.94
GCA_013152275.1ScaffoldJAADGS000000000SAMN12405788
M_MetaBat.127
GCA_013151655.1ScaffoldJAADHX000000000SAMN12405789
M_MetaBat.222
GCA_013151445.1ScaffoldJAADIG000000000SAMN12405790
M_MetaBat.3
GCA_013151435.1ScaffoldJAADIH000000000SAMN12405758
M_MetaBat.34
GCA_013151535.1ScaffoldJAADIC000000000SAMN12405757
M_MetaBat.230
GCA_013151335.1ScaffoldJAADIJ000000000SAMN12405759
M_MetaBat.44
GCA_013151255.1ScaffoldJAADIQ000000000SAMN12405760
M_MetaBat.60
GCA_013152755.1ScaffoldJAADFR000000000SAMN12405754
M_MaxBin.053
GCA_013152625.1ScaffoldJAADFY000000000SAMN12405755
M_MaxBin.134
GCA_013152615.1ScaffoldJAADGA000000000SAMN12405756
M_MaxBin.158
GCA_013154425.1ContigJAADCP000000000SAMN12405673
L_MaxBin.002
GCA_013154375.1ContigJAADCR000000000SAMN12405672
L_MaxBin.005
GCA_013154305.1ContigJAADCT000000000SAMN12405671
L_MaxBin.033
GCA_013153795.1ContigJAADDV000000000SAMN12405669
L_MetaBat.11
GCA_013153765.1ContigJAADDT000000000SAMN12405670
L_MetaBat.103
GCA_013153635.1ContigJAADDZ000000000SAMN12405668
L_MetaBat.131
GCA_013153495.1ContigJAADEH000000000SAMN12405667
L_MetaBat.199
GCA_013153455.1ContigJAADEK000000000SAMN12405666
L_MetaBat.209
GCA_013153295.1ContigJAADEV000000000SAMN12405663
L_MetaBat.31
GCA_013153315.1ContigJAADES000000000SAMN12405665
L_MetaBat.238
GCA_013153235.1ContigJAADEU000000000SAMN12405664
L_MetaBat.30
GCA_013151125.1ScaffoldJAADIT000000000SAMN12405721
M_MetaBat.67
GCA_013153045.1ContigJAADFD000000000SAMN12405681
L_MetaBat.84
GCA_013152425.1ScaffoldJAADGK000000000SAMN12405761
M_MetaBat.115
GCA_013152825.1ScaffoldJAADFP000000000SAMN12405725
M_MaxBin.041
GCA_013151115.1ScaffoldJAADIW000000000SAMN12405726
M_MetaBat.76
GCA_013150955.1ScaffoldJAADJD000000000SAMN12405732
M_MetaBat.96
GCA_013152715.1ScaffoldJAADFU000000000SAMN12405728
M_MaxBin.067
GCA_013152765.1ScaffoldJAADFT000000000SAMN12405727
M_MaxBin.061
GCA_013152225.1ScaffoldJAADGR000000000SAMN12405729
M_MetaBat.126
GCA_013151275.1ScaffoldJAADIP000000000SAMN12405731
M_MetaBat.59
GCA_013151735.1ScaffoldJAADHR000000000SAMN12405730
M_MetaBat.200
GCA_013151055.1ScaffoldJAADIZ000000000SAMN12405815
M_MetaBat.86
GCA_013152955.1ScaffoldJAADFJ000000000SAMN12405814
M_MaxBin.016
GCA_013153055.1ContigJAADFE000000000SAMN12405699
L_MetaBat.87
GCA_013153095.1ContigJAADFB000000000SAMN12405700
L_MetaBat.71
GCA_013153195.1ContigJAADEX000000000SAMN12405701
L_MetaBat.42
GCA_013153345.1ContigJAADEQ000000000SAMN12405702
L_MetaBat.230
GCA_013154255.1ContigJAADCX000000000SAMN12405715
L_MaxBin.048
GCA_013154195.1ContigJAADDA000000000SAMN12405714
L_MaxBin.063
GCA_013153475.1ContigJAADEJ000000000SAMN12405703
L_MetaBat.201
GCA_013153825.1ContigJAADDP000000000SAMN12405709
L_MaxBin.146
GCA_013153815.1ContigJAADDQ000000000SAMN12405708
L_MaxBin.160
GCA_013153715.1ContigJAADDW000000000SAMN12405706
L_MetaBat.114
GCA_013153685.1ContigJAADDX000000000SAMN12405705
L_MetaBat.128
GCA_013153675.1ContigJAADEA000000000SAMN12405704
L_MetaBat.136
GCA_013153755.1ContigJAADDU000000000SAMN12405707
L_MetaBat.107
GCA_013153935.1ContigJAADDO000000000SAMN12405710
L_MaxBin.143
GCA_013153915.1ContigJAADDL000000000SAMN12405711
L_MaxBin.132
GCA_013154075.1ContigJAADDG000000000SAMN12405712
L_MaxBin.107
GCA_013154055.1ContigJAADDF000000000SAMN12405713
L_MaxBin.097
GCA_013154035.1ContigJAADDH000000000SAMN12405645
L_MaxBin.110
GCA_013154145.1ContigJAADDC000000000SAMN12405646
L_MaxBin.080
GCA_013151935.1ScaffoldJAADHI000000000SAMN12405750
M_MetaBat.18
GCA_013153395.1ContigJAADEL000000000SAMN12405647
L_MetaBat.210
GCA_013152905.1ScaffoldJAADFI000000000SAMN12405716
M_MaxBin.015
GCA_013151465.1ScaffoldJAADIF000000000SAMN12405717
M_MetaBat.29
GCA_013153555.1ContigJAADEF000000000SAMN12405648
L_MetaBat.18
GCA_013153575.1ContigJAADEE000000000SAMN12405677
L_MetaBat.177
GCA_013153515.1ContigJAADEI000000000SAMN12405676
L_MetaBat.200
GCA_013153655.1ContigJAADEB000000000SAMN12405679
L_MetaBat.150
GCA_013153605.1ContigJAADED000000000SAMN12405678
L_MetaBat.17
GCA_013153865.1ContigJAADDR000000000SAMN12405680
L_MaxBin.195
GCA_013151015.1ScaffoldJAADJA000000000SAMN12405743
M_MetaBat.92
GCA_013152535.1ScaffoldJAADGE000000000SAMN12405734
M_MetaBat.100
GCA_013152655.1ScaffoldJAADFW000000000SAMN12405733
M_MaxBin.088
GCA_013153405.1ContigJAADEM000000000SAMN12405675
L_MetaBat.217
GCA_013153155.1ContigJAADEZ000000000SAMN12405674
L_MetaBat.64
GCA_013151975.1ScaffoldJAADHG000000000SAMN12405738
M_MetaBat.167
GCA_013152085.1ScaffoldJAADHC000000000SAMN12405737
M_MetaBat.158
GCA_013152135.1ScaffoldJAADGX000000000SAMN12405736
M_MetaBat.140
GCA_013152355.1ScaffoldJAADGO000000000SAMN12405735
M_MetaBat.121
GCA_013151215.1ScaffoldJAADIS000000000SAMN12405742
M_MetaBat.65
GCA_013151245.1ScaffoldJAADIR000000000SAMN12405741
M_MetaBat.63
GCA_013151505.1ScaffoldJAADID000000000SAMN12405740
M_MetaBat.24
GCA_013151565.1ScaffoldJAADIB000000000SAMN12405739
M_MetaBat.23
GCA_013151415.1ScaffoldJAADII000000000SAMN12405796
M_MetaBat.41
GCA_013152325.1ScaffoldJAADGN000000000SAMN12405794
M_MetaBat.120
GCA_013151955.1ScaffoldJAADHH000000000SAMN12405795
M_MetaBat.175
GCA_013153135.1ContigJAADFA000000000SAMN12405687
L_MetaBat.66
GCA_013153375.1ContigJAADEN000000000SAMN12405689
L_MetaBat.219
GCA_013153335.1ContigJAADEP000000000SAMN12405688
L_MetaBat.228
GCA_013152435.1ScaffoldJAADGJ000000000SAMN12405793
M_MetaBat.114
GCA_013152695.1ScaffoldJAADFV000000000SAMN12405792
M_MaxBin.086
GCA_013152585.1ScaffoldJAADGC000000000SAMN12405791
M_MetaBat97
GCA_013154135.1ContigJAADDB000000000SAMN12405690
L_MaxBin.078
GCA_013154225.1ContigJAADCW000000000SAMN12405691
L_MaxBin.044
GCA_013152795.1ScaffoldJAADFS000000000SAMN12405800
M_MaxBin.054
GCA_013153205.1ContigJAADEW000000000SAMN12405662
L_MetaBat.35
GCA_013153415.1ContigJAADEO000000000SAMN12405682
L_MetaBat.226
GCA_013152945.1ScaffoldJAADFL000000000SAMN12405803
M_MaxBin.025
GCA_013151915.1ContigJAADHJ000000000SAMN12405806
M_MetaBat.180
GCA_013151875.1ScaffoldJAADHL000000000SAMN12405808
M_MetaBat.191
GCA_013152145.1ScaffoldJAADGW000000000SAMN12405805
M_MetaBat.138
GCA_013152215.1ScaffoldJAADGT000000000SAMN12405804
M_MetaBat.128
GCA_013151365.1ScaffoldJAADIK000000000SAMN12405811
M_MetaBat.46
GCA_013151235.1ScaffoldJAADIO000000000SAMN12405812
M_MetaBat.58
GCA_013151775.1ScaffoldJAADHO000000000SAMN12405809
M_MetaBat.197
GCA_013151635.1ScaffoldJAADHV000000000SAMN12405810
M_MetaBat.211
GCA_013151835.1ScaffoldJAADHK000000000SAMN12405807
M_MetaBat.189
GCA_013151175.1ScaffoldJAADIV000000000SAMN12405813
M_MetaBat.74
GCA_013153035.1ContigJAADFF000000000SAMN12405696
L_MetaBat.91
GCA_013152315.1ScaffoldJAADGP000000000SAMN12405746
M_MetaBat.123
GCA_013152375.1ScaffoldJAADGM000000000SAMN12405745
M_MetaBat.118
GCA_013151855.1ScaffoldJAADHM000000000SAMN12405747
M_MetaBat.192
GCA_013152835.1ScaffoldJAADFQ000000000SAMN12405744
M_MaxBin.049
GCA_013153005.1ContigJAADFG000000000SAMN12405683
L_MetaBat.93
GCA_013152545.1ScaffoldJAADGF000000000SAMN12405762
M_MetaBat.104
GCA_013153255.1ContigJAADET000000000SAMN12405684
L_MetaBat.25
GCA_013152005.1ScaffoldJAADHE000000000SAMN12405766
M_MetaBat.162
GCA_013151795.1ScaffoldJAADHQ000000000SAMN12405767
M_MetaBat.2
GCA_013151745.1ScaffoldJAADHS000000000SAMN12405768
M_MetaBat.201
GCA_013151695.1ScaffoldJAADHW000000000SAMN12405770
M_MetaBat.218
GCA_013151645.1ScaffoldJAADHU000000000SAMN12405769
M_MetaBat.209
GCA_013151575.1ScaffoldJAADHZ000000000SAMN12405771
M_MetaBat.225
GCA_013151345.1ScaffoldJAADIM000000000SAMN12405773
M_MetaBat.56
GCA_013151355.1ScaffoldJAADIL000000000SAMN12405772
M_MetaBat.51
GCA_013152415.1ScaffoldJAADGI000000000SAMN12405763
M_MetaBat.112
GCA_013152295.1ScaffoldJAADGQ000000000SAMN12405764
M_MetaBat.125
GCA_013152045.1ScaffoldJAADGZ000000000SAMN12405765
M_MetaBat.151
GCA_013150915.1ScaffoldJAADJE000000000SAMN12405777
M_MetaBat.99
GCA_013151035.1ScaffoldJAADJB000000000SAMN12405776
M_MetaBat.93
GCA_013151045.1ScaffoldJAADIY000000000SAMN12405775
M_MetaBat.81
GCA_013151135.1ScaffoldJAADIX000000000SAMN12405774
M_MetaBat.77
GCA_013153975.1ContigJAADDI000000000SAMN12405685
L_MaxBin.115
GCA_013153955.1ContigJAADDM000000000SAMN12405686
L_MaxBin.137
GCA_013151865.1ScaffoldJAADHN000000000SAMN12405785
M_MetaBat.195
GCA_013151705.1ScaffoldJAADHT000000000SAMN12405786
M_MetaBat.202
GCA_013152685.1ScaffoldJAADFX000000000SAMN12405720
M_MaxBin.100
GCA_013152995.1ScaffoldJAADFH000000000SAMN12405718
M_MaxBin.010
GCA_013152845.1ScaffoldJAADFM000000000SAMN12405719
M_MaxBin.027
GCA_013154005.1ContigJAADDK000000000SAMN12405650
L_MaxBin.117
GCA_013153845.1ContigJAADDS000000000SAMN12405651
L_MetaBat.10
GCA_013154335.1ContigJAADCQ000000000SAMN12405652
L_MaxBin.003
GCA_013152815.1ScaffoldJAADFO000000000SAMN12405817
M_MaxBin.034
GCA_013152485.1ScaffoldJAADGG000000000SAMN12405748
M_MetaBat.107
GCA_013151495.1ScaffoldJAADIE000000000SAMN12405753
M_MetaBat.26
GCA_013151785.1ScaffoldJAADHP000000000SAMN12405751
M_MetaBat.199
GCA_013151555.1ScaffoldJAADIA000000000SAMN12405752
M_MetaBat.229
GCA_013152195.1ScaffoldJAADGU000000000SAMN12405749
M_MetaBat.13
GCA_013152105.1ScaffoldJAADHA000000000SAMN12405816
M_MetaBat.154
GCA_013152205.1ScaffoldJAADGV000000000SAMN12405780
M_MetaBat.130
GCA_013151585.1ScaffoldJAADHY000000000SAMN12405781
M_MetaBat.224
GCA_013151315.1ScaffoldJAADIN000000000SAMN12405782
M_MetaBat.57
GCA_013152475.1ScaffoldJAADGH000000000SAMN12405779
M_MetaBat.109
GCA_013152515.1ScaffoldJAADGD000000000SAMN12405778
M_MetaBat.1
GCA_013151185.1ScaffoldJAADIU000000000SAMN12405783
M_MetaBat.71
GCA_013151965.1ScaffoldJAADHF000000000SAMN12405787
M_MetaBat.164
GCA_013153595.1ContigJAADEC000000000SAMN12405653
L_MetaBat.161
GCA_013153525.1ContigJAADEG000000000SAMN12405692
L_MetaBat.182
GCA_013153725.1ContigJAADDY000000000SAMN12405693
L_MetaBat.13
GCA_013154385.1ContigJAADCO000000000SAMN12405695
L_MaxBin.001
GCA_013154175.1ContigJAADCZ000000000SAMN12405694
L_MaxBin.058
GCA_013154205.1ContigJAADCY000000000SAMN12405659
L_MaxBin.049
GCA_013154235.1ContigJAADCV000000000SAMN12405660
L_MaxBin.041
GCA_013154355.1ContigJAADCU000000000SAMN12405661
L_MaxBin.038
GCA_013153895.1ContigJAADDN000000000SAMN12405657
L_MaxBin.140
GCA_013154085.1ContigJAADDE000000000SAMN12405658
L_MaxBin.089
GCA_013153275.1ContigJAADER000000000SAMN12405656
L_MetaBat.236
GCA_013153145.1ContigJAADEY000000000SAMN12405655
L_MetaBat.44
GCA_013153105.1ContigJAADFC000000000SAMN12405654
L_MetaBat.77
GCA_013152575.1ScaffoldJAADGB000000000SAMN12405722
M_MaxBin.162
GCA_013153965.1ContigJAADDJ000000000SAMN12405697
L_MaxBin.116
GCA_013154295.1ContigJAADCS000000000SAMN12405698
L_MaxBin.031
GCA_013152075.1ScaffoldJAADHD000000000SAMN12405784
M_MetaBat.16
GCA_013154095.1ContigJAADDD000000000SAMN12405649
L_MaxBin.088
GCA_013152035.1ScaffoldJAADHB000000000SAMN12405798
M_MetaBat.155
GCA_013152165.1ScaffoldJAADGY000000000SAMN12405797
M_MetaBat.148
GCA_013152675.1ScaffoldJAADFZ000000000SAMN12405799
M_MaxBin.138

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