Subseafloor marine environments (ID 605778) - BioProject

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Accession: PRJNA605778 ID: 605778

Subseafloor marine environments

Subseafloor marine Chloroflexi from metagenomic assembly

The goal of this project is to investigate the metabolism of marine subsurface Chloroflexi from 6 locations and environments around the world. More...

Accession	PRJNA605778
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	marine sediment metagenome[Taxonomy ID: 412755] unclassified sequences; metagenomes; ecological metagenomes; marine sediment metagenome
Publications	Fincker M et al., "Metabolic strategies of marine subseafloor Chloroflexi inferred from genome reconstructions.", Environ Microbiol, 2020 Aug;22(8):3188-3204
Submission	Registration date: 11-Mar-2020 Stanford University
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	31
Publications
PubMed	1
Other datasets
BioSample	31
Assembly	31

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

31
31

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_011174845.1	DUEW00000000	SAMN14094341	W167	Anaerolineae bacterium
GCA_011174825.1	DUEZ00000000	SAMN14094344	W379	Anaerolineae bacterium
GCA_011192015.1	DUET00000000	SAMN14094338	W1033	Anaerolineae bacterium
GCA_011176685.1	DUED00000000	SAMN14094322	A373	Anaerolineae bacterium
GCA_011176615.1	DUEG00000000	SAMN14094325	G519	Anaerolineae bacterium
GCA_011176535.1	DUEP00000000	SAMN14094334	M16	Anaerolineae bacterium
GCA_011176555.1	DUEF00000000	SAMN14094324	G439	Caldilineae bacterium
GCA_011176545.1	DUEN00000000	SAMN14094332	J4	Caldilineae bacterium
GCA_011192085.1	DUEQ00000000	SAMN14094335	M2005	Caldilineae bacterium
GCA_011192195.1	DUEH00000000	SAMN14094326	G576	Chloroflexota bacterium
GCA_011171075.1	DUFD00000000	SAMN14094348	W589	Dehalococcoidia bacterium
GCA_011170325.1	DUEX00000000	SAMN14094342	W265	Dehalococcoidia bacterium
GCA_011170395.1	DUEO00000000	SAMN14094333	J62	Dehalococcoidia bacterium
GCA_011170375.1	DUEV00000000	SAMN14094340	W156	Dehalococcoidia bacterium
GCA_011170385.1	DUFE00000000	SAMN14094349	W693	Dehalococcoidia bacterium
GCA_011192105.1	DUEM00000000	SAMN14094331	J24	Dehalococcoidia bacterium
GCA_011192075.1	DUER00000000	SAMN14094336	S120	Dehalococcoidia bacterium
GCA_011192055.1	DUES00000000	SAMN14094337	S90	Dehalococcoidia bacterium
GCA_011192005.1	DUFB00000000	SAMN14094346	W425	Dehalococcoidia bacterium
GCA_011191985.1	DUEU00000000	SAMN14094339	W111	Dehalococcoidia bacterium
GCA_011191875.1	DUFC00000000	SAMN14094347	W498	Dehalococcoidia bacterium
GCA_011176655.1	DUEB00000000	SAMN14094320	A89	Dehalococcoidia bacterium
GCA_011176635.1	DUEC00000000	SAMN14094321	A328	Dehalococcoidia bacterium
GCA_011191975.1	DUFA00000000	SAMN14094345	W403	Dehalococcoidia bacterium
GCA_011174815.1	DUFF00000000	SAMN14094350	W80	Dehalococcoidia bacterium
GCA_011174795.1	DUEY00000000	SAMN14094343	W281	Dehalococcoidia bacterium
GCA_011170285.1	DUEE00000000	SAMN14094323	A509	Dehalococcoidia bacterium
GCA_011192125.1	DUEL00000000	SAMN14094330	J88	Thermoflexia bacterium
GCA_011192175.1	DUEJ00000000	SAMN14094328	G713	Thermoflexia bacterium
GCA_011192185.1	DUEI00000000	SAMN14094327	G58	Thermoflexia bacterium
GCA_011192155.1	DUEK00000000	SAMN14094329	G79	Thermoflexia bacterium

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Subseafloor marine environments

Subseafloor marine Chloroflexi from metagenomic assembly

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