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Accession: PRJNA850115 ID: 850115

Urban MAG antimicrobial resistance diversity

Investigating the diversity and spread of antimicrobial resistance genes in metagenome-assembled genomes (MAGs) that were assembled from metagenomic samples taken in urban areas.
AccessionPRJNA850115
Data TypeGenome sequencing and assembly
ScopeMultispecies
PublicationsMagnúsdóttir S et al., "Metagenome-assembled genomes indicate that antimicrobial resistance genes are highly prevalent among urban bacteria and multidrug and glycopeptide resistances are ubiquitous in most taxa.", Front Microbiol, 2023;14:1037845
SubmissionRegistration date: 17-Jun-2022
NFDI4Microbiota
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)3838
Publications
PubMed1
PMC1
Other datasets
BioSample3845
Assembly3838
Assembly details:
Assembly levelNumber of Assemblies
3790
47
3837
AssemblyLevelWGSBioSampleIsolateTaxonomy
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CTOTU49275
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CTOTU49331
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CTOTU49176
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CTOTU49177
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CTOTU49174
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CTOTU48794
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CTOTU48778
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CTOTU48781
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CTOTU48750
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CTOTU47027
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CTOTU50711
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CTOTU48381
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CTOTU47214
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CTOTU48332
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CTOTU47026
GCA_032054765.1ScaffoldDAMBSC000000000SAMN29161900
CTOTU49203
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CTOTU49649
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CTOTU48110
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CTOTU46673
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CTOTU46640
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CTOTU50315
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CTOTU49728
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CTOTU49191
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CTOTU49009
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CTOTU49053
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CTOTU50126
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CTOTU49745
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CTOTU48912
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CTOTU48140
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CTOTU48374
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CTOTU50463
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CTOTU47211
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CTOTU47439
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CTOTU47888
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CTOTU48216
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CTOTU50168
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CTOTU48015
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CTOTU50364
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CTOTU14206
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CTOTU14233
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CTOTU14239
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CTOTU46594
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CTOTU46585
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CTOTU14262
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CTOTU14272
GCA_031972445.1ScaffoldDALYER000000000SAMN29156118
CTOTU14259

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