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Accession: PRJNA846736 ID: 846736

Prokaryotes

Gulf of Maine single cell genome to phenome

This study links the phenome of individual cells with their genome through the application of indexed FACS sorting and sequencing of individual cells. More...
AccessionPRJNA846736
Data TypeGenome sequencing and assembly
ScopeMultispecies
PublicationsMunson-McGee JH et al., "Decoupling of respiration rates and abundance in marine prokaryoplankton.", Nature, 2022 Dec;612(7941):764-770
Grants
  • "Single Cell Genome-to-Phenome: Integrating Genome and Phenome Analyses of Individual Microbial Cells in Complex Microbiomes" (Grant ID 1826734, National Science FOundation)
SubmissionRegistration date: 7-Jun-2022
Bigelow Laboratory for Ocean Sciences
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)6915
SRA Experiments8
Publications
PubMed1
PMC1
Other datasets
BioSample7526
Assembly6915
Assembly details:
Assembly levelNumber of Assemblies
6915
6915
AssemblyLevelWGSBioSampleIsolateTaxonomy
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AH-580-N19
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AH-657-K11
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AH-224-G09
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AH-551-F10
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AH-551-J17
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AH-551-J16
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AH-551-L11
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AH-551-L15
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AH-551-L20
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AH-551-M03
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AH-551-M07
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AH-551-M02
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AH-551-L22
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AH-551-K13
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AH-551-K09
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AH-551-K10
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AH-551-M10
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AH-551-M19
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AH-551-M21
GCA_028347035.1ContigJAOMGO000000000SAMN29371089
AH-551-M20
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AH-551-N02
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AH-551-N09
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AH-551-N20
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AH-551-O10
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AH-551-P01
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AH-578-B14
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AH-273-B05
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AH-135-E07
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AH-135-L03
GCA_028379665.1ContigJAOEKE000000000SAMN29270097
AH-141-J10
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AH-141-C09
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AH-548-A02
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AH-548-A05
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AH-548-A14
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AH-548-B11
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AH-548-C07
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AH-548-C04
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AH-548-A15
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AH-548-A18
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AH-548-B06
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AH-548-B05
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AH-548-A21
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AH-548-C15
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AH-548-C21
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AH-548-C22
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AH-548-D08
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AH-548-D19
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AH-548-E14
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AH-548-C17
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AH-548-E19
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AH-548-F05
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AH-548-E21
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AH-548-F11
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AH-548-F20
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AH-548-I03
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AH-548-I10
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AH-548-I15
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AH-548-I16
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AH-548-I23
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AH-548-I22
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AH-548-J13
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AH-548-P01
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AH-548-P20
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AH-551-C20
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AH-551-D04
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AH-551-E21
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AM-384-M18
GCA_028096715.1ContigJAOHDW000000000SAMN29376190
AM-384-M07
GCA_028099925.1ContigJAOHII000000000SAMN29376070
AM-384-B23
GCA_028100205.1ContigJAOHIX000000000SAMN29376054
AM-382-P06
GCA_028100165.1ContigJAOHIT000000000SAMN29376058
AM-382-P13
GCA_028099605.1ContigJAOHHN000000000SAMN29376091
AM-384-D21
GCA_028101085.1ContigJAOHKC000000000SAMN29376019
AM-382-M13
GCA_028096165.1ContigJAOHDA000000000SAMN29376212
AM-384-N11
GCA_028096055.1ContigJAOHCX000000000SAMN29376215
AM-384-N15
GCA_028094725.1ContigJAOHBU000000000SAMN29376246
AM-384-P18
GCA_028095275.1ContigJAOHCG000000000SAMN29376233
AM-384-O19
SRA Data Details
ParameterValue
Data volume, Gbases133
Data volume, Mbytes50473

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