hydrothermal vent metagenome (ID 879230) - BioProject

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Accession: PRJNA879230 ID: 879230

hydrothermal vent metagenome

Hydrothermal plume water metagenomes

Plume water metagenomes at different distances from a single hydrothermal vent source in the Southern Guaymas Basin raw reads, assemblies, and MAGs

Accession	PRJNA879230
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	hydrothermal vent metagenome[Taxonomy ID: 652676] unclassified sequences; metagenomes; ecological metagenomes; hydrothermal vent metagenome
Publications	Published online: Hwang Y et al., "Viruses interact with hosts that span distantly related microbial domains in dense hydrothermal mats", Nature Microbiology, 2023;
Submission	Registration date: 3-May-2023 Harvard University

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	195
WGS master	178
Genomic DNA	17
SRA Experiments	10
Other datasets
BioSample	205
Assembly	178

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

176
2
178

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_029938075.1	JAPYOQ000000000	SAMN30800939	MOW.maxbin2.060	Acidimicrobiales bacterium
GCA_029936915.1	JAPYRH000000000	SAMN30801008	PW3.metabat2.128	Acidimicrobiales bacterium
GCA_029936795.1	JAPYRW000000000	SAMN30801023	PW3.metabat2.36	Acidimicrobiales bacterium
GCA_029936275.1	JAPYTI000000000	SAMN30801061	PW6.metabat2.141	Acidimicrobiales bacterium
GCA_029942065.1	JAPYTY000000000	SAMN30801077	PW8.concoct.193_sub	Acidobacteriota bacterium
GCA_029936455.1	JAPYST000000000	SAMN30801046	PW5.maxbin2.171	Alcanivorax sp.
GCA_029937375.1	JAPYQB000000000	SAMN30800976	PW2.concoct.192	Alcanivorax sp.
GCA_029937235.1	JAPYQR000000000	SAMN30800992	PW3.concoct.163	Alphaproteobacteria bacterium
GCA_029937205.1	JAPYQV000000000	SAMN30800996	PW3.concoct.191_sub	Alphaproteobacteria bacterium
GCA_029936875.1	JAPYRS000000000	SAMN30801019	PW3.metabat2.2	Alphaproteobacteria bacterium
GCA_029937535.1	JAPYPT000000000	SAMN30800968	PW10.maxbin2.068	Alphaproteobacteria bacterium
GCA_029936755.1	JAPYRZ000000000	SAMN30801026	PW3.metabat2.73_sub	Alphaproteobacteria bacterium
GCA_029936295.1	JAPYTH000000000	SAMN30801060	PW6.metabat2.137_sub	Alphaproteobacteria bacterium
GCA_029936195.1	JAPYUH000000000	SAMN30801086	PW8.maxbin2.065_sub	Alphaproteobacteria bacterium
GCA_029941135.1	JAPYRI000000000	SAMN30801009	PW3.metabat2.129_sub	Alphaproteobacteria bacterium
GCA_029941545.1	JAPYOY000000000	SAMN30800947	MOW.metabat2.60	Alteromonas sp.
GCA_029937115.1	JAPYQY000000000	SAMN30800999	PW3.concoct.229	Alteromonas sp.
GCA_029936335.1	JAPYTB000000000	SAMN30801054	PW5.metabat2.67_sub	Arenicellales bacterium
GCA_029937485.1	JAPYPV000000000	SAMN30800970	PW10.metabat2.150	Arenicellales bacterium
GCA_029937695.1	JAPYPL000000000	SAMN30800960	PW1.metabat2.35	Arenicellales bacterium
GCA_029938135.1	JAPYOO000000000	SAMN30800937	MOW.maxbin2.006	Bermanella sp.
GCA_029941355.1	JAPYPN000000000	SAMN30800962	PW1.metabat2.94	Candidatus Binatia bacterium
GCA_029937645.1	JAPYPO000000000	SAMN30800963	PW10.concoct.19	Candidatus Hydrogenedentota bacterium
GCA_029937195.1	JAPYQT000000000	SAMN30800994	PW3.concoct.188_sub	Candidatus Hydrogenedentota bacterium
GCA_029941315.1	JAPYQE000000000	SAMN30800979	PW2.concoct.70_sub	Candidatus Latescibacterota bacterium
GCA_029941145.1	JAPYRJ000000000	SAMN30801010	PW3.metabat2.13	Candidatus Latescibacterota bacterium
GCA_029941565.1	JAPYRN000000000	SAMN30801014	PW3.metabat2.162	Candidatus Latescibacterota bacterium
GCA_029941985.1	JAPYTV000000000	SAMN30801074	PW7.metabat2.87	Candidatus Pelagibacter bacterium
GCA_029941925.1	JAPYTR000000000	SAMN30801070	PW6.metabat2.99	Candidatus Poseidoniaceae archaeon
GCA_029942165.1	JAPYUV000000000	SAMN30801100	PW8.metabat2.93	Candidatus Poseidoniaceae archaeon
GCA_029937145.1	JAPYQW000000000	SAMN30800997	PW3.concoct.195	Candidatus Poseidoniaceae archaeon
GCA_029937245.1	JAPYQS000000000	SAMN30800993	PW3.concoct.183	Candidatus Poseidoniia archaeon
GCA_029936395.1	JAPYSW000000000	SAMN30801049	PW5.metabat2.146	Candidatus Poseidoniia archaeon
GCA_029941645.1	JAPYSZ000000000	SAMN30801052	PW5.metabat2.36_sub	Candidatus Poseidoniia archaeon
GCA_029940455.1	JAPYUR000000000	SAMN30801096	PW8.metabat2.59_sub	Candidatus Poseidoniia archaeon
GCA_029937315.1	JAPYQF000000000	SAMN30800980	PW2.maxbin2.073_sub	Candidatus Thalassarchaeaceae archaeon
GCA_029937055.1	JAPYRB000000000	SAMN30801002	PW3.maxbin2.064	Candidatus Thalassarchaeaceae archaeon
GCA_029936345.1	JAPYSX000000000	SAMN30801050	PW5.metabat2.160	Candidatus Thalassarchaeaceae archaeon
GCA_029941215.1	JAPYQO000000000	SAMN30800989	PW2.metabat2.85	Candidatus Thalassarchaeaceae archaeon
GCA_029940695.1	JAPYUP000000000	SAMN30801094	PW8.metabat2.180	Candidatus Thalassarchaeaceae archaeon
GCA_029942125.1	JAPYUB000000000	SAMN30801080	PW8.concoct.221	Candidatus Thalassarchaeaceae archaeon
GCA_029936515.1	JAPYSK000000000	SAMN30801037	PW4.metabat2.32	Candidatus Thioglobus sp.
GCA_029938145.1	JAPYOM000000000	SAMN30800935	MOW.concoct.105	Candidatus Thioglobus sp.
GCA_029937855.1	JAPYPC000000000	SAMN30800951	PW1.concoct.216	Christiangramia sp.
GCA_029938115.1	JAPYOP000000000	SAMN30800938	MOW.maxbin2.007	Colwellia sp.
GCA_029936705.1	JAPYSD000000000	SAMN30801030	PW4.concoct.224	Croceicoccus sp.
GCA_029941075.1	JAPYRP000000000	SAMN30801016	PW3.metabat2.178	Cycloclasticus sp.
GCA_029942005.1	JAPYSR000000000	SAMN30801044	PW5.maxbin2.009	Cycloclasticus sp.
GCA_029940715.1	JAPYTU000000000	SAMN30801073	PW7.metabat2.10	Cytophagales bacterium
GCA_029940375.1	JAPYUX000000000	SAMN30801102	PW8.metabat2.98	Dehalococcoidia bacterium
GCA_029941115.1	JAPYRK000000000	SAMN30801011	PW3.metabat2.132	Dehalococcoidia bacterium
GCA_029941095.1	JAPYRO000000000	SAMN30801015	PW3.metabat2.168	Dehalococcoidia bacterium
GCA_029942105.1	JAPYUE000000000	SAMN30801083	PW8.concoct.98_sub	Dehalococcoidia bacterium
GCA_029936675.1	JAPYSB000000000	SAMN30801028	PW3.metabat2.87	Dehalococcoidia bacterium
GCA_029936485.1	JAPYSM000000000	SAMN30801039	PW4.metabat2.87_sub	Dehalococcoidia bacterium
GCA_029936585.1	JAPYSI000000000	SAMN30801035	PW4.maxbin2.068_sub	Dehalococcoidia bacterium
GCA_029936815.1	JAPYRX000000000	SAMN30801024	PW3.metabat2.41	Dehalococcoidia bacterium
GCA_029936155.1	JAPYUK000000000	SAMN30801089	PW8.metabat2.104	Dehalococcoidia bacterium
GCA_029936135.1	JAPYUQ000000000	SAMN30801095	PW8.metabat2.47_sub	Dehalococcoidia bacterium
GCA_029936855.1	JAPYRT000000000	SAMN30801020	PW3.metabat2.214_sub	Dehalococcoidia bacterium
GCA_029936935.1	JAPYRQ000000000	SAMN30801017	PW3.metabat2.181	Dehalococcoidia bacterium
GCA_029937175.1	JAPYQU000000000	SAMN30800995	PW3.concoct.190_sub	Dehalococcoidia bacterium
GCA_029937545.1	JAPYPR000000000	SAMN30800966	PW10.concoct.56	Erythrobacter sp.
GCA_029936635.1	JAPYSE000000000	SAMN30801031	PW4.concoct.33	Erythrobacter sp.
GCA_029941805.1	JAPYTL000000000	SAMN30801064	PW6.metabat2.155	Erythrobacter sp.
GCA_029940495.1	JAPYUO000000000	SAMN30801093	PW8.metabat2.136	Fidelibacterota bacterium
GCA_029941525.1	JAPYOX000000000	SAMN30800946	MOW.metabat2.39_sub	Fidelibacterota bacterium
GCA_029941055.1	JAPYRL000000000	SAMN30801012	PW3.metabat2.138_sub	Fidelibacterota bacterium
GCA_029936475.1	JAPYSS000000000	SAMN30801045	PW5.maxbin2.043	Fidelibacterota bacterium
GCA_029938045.1	JAPYOT000000000	SAMN30800942	MOW.metabat2.12	Fidelibacterota bacterium
GCA_029936965.1	JAPYRG000000000	SAMN30801007	PW3.metabat2.108	Fidelibacterota bacterium
GCA_029936885.1	JAPYRR000000000	SAMN30801018	PW3.metabat2.184_sub	Fidelibacterota bacterium
GCA_029941195.1	JAPYQP000000000	SAMN30800990	PW2.metabat2.97	Flavobacteriaceae bacterium
GCA_029940545.1	JAPYUN000000000	SAMN30801092	PW8.metabat2.12	Flavobacteriaceae bacterium
GCA_029941725.1	JAPYTF000000000	SAMN30801058	PW6.metabat2.103	Flavobacteriaceae bacterium
GCA_029940995.1	JAPYSO000000000	SAMN30801041	PW4.metabat2.97_sub	Flavobacteriales bacterium
GCA_029936695.1	JAPYSC000000000	SAMN30801029	PW3.metabat2.89	Flavobacteriales bacterium
GCA_029941865.1	JAPYTO000000000	SAMN30801067	PW6.metabat2.181	Fuerstiella sp.
GCA_029941745.1	JAPYTG000000000	SAMN30801059	PW6.metabat2.106	Gammaproteobacteria bacterium
GCA_029941705.1	JAPYTE000000000	SAMN30801057	PW6.maxbin2.140_sub	Gammaproteobacteria bacterium
GCA_029942045.1	JAPYTX000000000	SAMN30801076	PW8.concoct.15	Gammaproteobacteria bacterium
GCA_029941505.1	JAPYPA000000000	SAMN30800949	MOW.metabat2.97	Gammaproteobacteria bacterium
GCA_029941485.1	JAPYOZ000000000	SAMN30800948	MOW.metabat2.77	Gammaproteobacteria bacterium
GCA_029941465.1	JAPYQN000000000	SAMN30800988	PW2.metabat2.74	Gammaproteobacteria bacterium
GCA_029936775.1	JAPYRY000000000	SAMN30801025	PW3.metabat2.52	Gammaproteobacteria bacterium
GCA_029936535.1	JAPYSL000000000	SAMN30801038	PW4.metabat2.77	Gammaproteobacteria bacterium
GCA_029936415.1	JAPYSN000000000	SAMN30801040	PW4.metabat2.88	Gammaproteobacteria bacterium
GCA_029936065.1	JAPYUU000000000	SAMN30801099	PW8.metabat2.90	Gammaproteobacteria bacterium
GCA_029937335.1	JAPYQD000000000	SAMN30800978	PW2.concoct.6_sub	Gammaproteobacteria bacterium
GCA_029941175.1	JAPYRM000000000	SAMN30801013	PW3.metabat2.160	Halobacteriales archaeon
GCA_029936955.1	JAPYRF000000000	SAMN30801006	PW3.metabat2.101	Halomonas sp.
GCA_029936995.1	JAPYRE000000000	SAMN30801005	PW3.maxbin2.244	Henriciella sp.
GCA_029937755.1	JAPYPG000000000	SAMN30800955	PW1.maxbin2.187	Henriciella sp.
GCA_029937835.1	JAPYPD000000000	SAMN30800952	PW1.concoct.229	Idiomarina sp.
GCA_029937805.1	JAPYPE000000000	SAMN30800953	PW1.concoct.61	Idiomarina sp.
GCA_029936255.1	JAPYUA000000000	SAMN30801079	PW8.concoct.212_sub	Idiomarina sp.
GCA_029936175.1	JAPYUI000000000	SAMN30801087	PW8.maxbin2.208_sub	Kiritimatiellia bacterium
GCA_029936425.1	JAPYSU000000000	SAMN30801047	PW5.maxbin2.186	Litorimonas sp.
GCA_029937415.1	JAPYPZ000000000	SAMN30800974	PW10.metabat2.69	Longimicrobiales bacterium
GCA_029941945.1	JAPYTS000000000	SAMN30801071	PW7.concoct.91_sub	Longimicrobiales bacterium
GCA_029941335.1	JAPYQG000000000	SAMN30800981	PW2.maxbin2.108_sub	Longimicrobiales bacterium
GCA_029941275.1	JAPYQK000000000	SAMN30800985	PW2.metabat2.149	Longimicrobiales bacterium
GCA_029937075.1	JAPYQZ000000000	SAMN30801000	PW3.concoct.60	Marinobacter sp.
GCA_029941255.1	JAPYQQ000000000	SAMN30800991	PW3.concoct.140_sub	Marinobacter sp.
GCA_029942085.1	JAPYTZ000000000	SAMN30801078	PW8.concoct.197_sub	Marinobacter sp.
GCA_029936615.1	JAPYSG000000000	SAMN30801033	PW4.maxbin2.050_sub	Methanobacteriota archaeon
GCA_029936575.1	JAPYSH000000000	SAMN30801034	PW4.maxbin2.058_sub	Methanobacteriota archaeon
GCA_029942145.1	JAPYUF000000000	SAMN30801084	PW8.maxbin2.034	Methylococcaceae bacterium
GCA_029936365.1	JAPYSY000000000	SAMN30801051	PW5.metabat2.3	Methylococcaceae bacterium
GCA_029937975.1	JAPYOW000000000	SAMN30800945	MOW.metabat2.37_sub	Methylococcaceae bacterium
GCA_029940575.1	JAPYUL000000000	SAMN30801090	PW8.metabat2.11	Methylococcales bacterium
GCA_029938015.1	JAPYOU000000000	SAMN30800943	MOW.metabat2.22	Methylophilaceae bacterium
GCA_029941625.1	JAPYSV000000000	SAMN30801048	PW5.metabat2.118	Methyloprofundus sp.
GCA_029937495.1	JAPYPU000000000	SAMN30800969	PW10.maxbin2.185	Microbacterium sp.
GCA_029937285.1	JAPYQJ000000000	SAMN30800984	PW2.maxbin2.193	Microbacterium sp.
GCA_029937735.1	JAPYPI000000000	SAMN30800957	PW1.metabat2.11	Myxococcota bacterium
GCA_029941665.1	JAPYTA000000000	SAMN30801053	PW5.metabat2.64	Myxococcota bacterium
GCA_029941885.1	JAPYTP000000000	SAMN30801068	PW6.metabat2.187	Myxococcota bacterium
GCA_029942025.1	JAPYTW000000000	SAMN30801075	PW8.concoct.127_sub	Myxococcota bacterium
GCA_029941965.1	JAPYTT000000000	SAMN30801072	PW7.maxbin2.087_sub	Myxococcota bacterium
GCA_029941235.1	JAPYQM000000000	SAMN30800987	PW2.metabat2.22_sub	Myxococcota bacterium
GCA_029941825.1	JAPYTM000000000	SAMN30801065	PW6.metabat2.175	Nitrosopumilus sp.
GCA_029940385.1	JAPYUW000000000	SAMN30801101	PW8.metabat2.97	Nitrospinaceae bacterium
GCA_029938035.1	JAPYOR000000000	SAMN30800940	MOW.maxbin2.067_sub	Nitrospinaceae bacterium
GCA_029937655.1	JAPYPK000000000	SAMN30800959	PW1.metabat2.33	Nitrospinaceae bacterium
GCA_029937635.1	JAPYPM000000000	SAMN30800961	PW1.metabat2.53_sub	Nitrospinaceae bacterium
GCA_029937135.1	JAPYQX000000000	SAMN30800998	PW3.concoct.202	Nitrospinota bacterium
GCA_029937395.1	JAPYQA000000000	SAMN30800975	PW2.concoct.141_sub	Nitrospirales bacterium
GCA_029937705.1	JAPYPJ000000000	SAMN30800958	PW1.metabat2.150	Nitrospiria bacterium
GCA_029937575.1	JAPYPS000000000	SAMN30800967	PW10.concoct.85	Nocardioides sp.
GCA_029938085.1	JAPYOS000000000	SAMN30800941	MOW.metabat2.102_sub	Oceanospirillaceae bacterium
GCA_029941035.1	JAPYRU000000000	SAMN30801021	PW3.metabat2.218_sub	Opitutales bacterium
GCA_029938175.1	JAPYON000000000	SAMN30800936	MOW.concoct.128	Paracoccaceae bacterium
GCA_029941765.1	JAPYTJ000000000	SAMN30801062	PW6.metabat2.145	Pirellulaceae bacterium
GCA_029936215.1	JAPYUD000000000	SAMN30801082	PW8.concoct.81	Pirellulaceae bacterium
GCA_029937915.1	JAPYPB000000000	SAMN30800950	PW1.concoct.209_sub	Piscirickettsiaceae bacterium
GCA_029941375.1	JAPYQH000000000	SAMN30800982	PW2.maxbin2.142_sub	Planctomycetaceae bacterium
GCA_029941845.1	JAPYTN000000000	SAMN30801066	PW6.metabat2.18	Planctomycetota bacterium
GCA_029941685.1	JAPYTC000000000	SAMN30801055	PW6.concoct.11	Planctomycetota bacterium
GCA_029936315.1	JAPYTD000000000	SAMN30801056	PW6.concoct.127_sub	Planctomycetota bacterium
GCA_029936095.1	JAPYUS000000000	SAMN30801097	PW8.metabat2.74_sub	Planctomycetota bacterium
GCA_029936545.1	JAPYSJ000000000	SAMN30801036	PW4.maxbin2.161_sub	Planctomycetota bacterium
GCA_029937765.1	JAPYPH000000000	SAMN30800956	PW1.metabat2.10	Planctomycetota bacterium
GCA_029937015.1	JAPYRC000000000	SAMN30801003	PW3.maxbin2.172_sub	Planctomycetota bacterium
GCA_029941785.1	JAPYTK000000000	SAMN30801063	PW6.metabat2.153	Polyangiaceae bacterium
GCA_029937985.1	JAPYOV000000000	SAMN30800944	MOW.metabat2.31	Pseudoalteromonas sp.
GCA_029941905.1	JAPYTQ000000000	SAMN30801069	PW6.metabat2.7	Pseudomonadales bacterium
GCA_029937445.1	JAPYPX000000000	SAMN30800972	PW10.metabat2.20	Pseudomonadales bacterium
GCA_029936655.1	JAPYSF000000000	SAMN30801032	PW4.maxbin2.019_sub	Pseudomonadales bacterium
GCA_029937435.1	JAPYPY000000000	SAMN30800973	PW10.metabat2.56	Rhodococcus sp. (in: high G+C Gram-positive bacteria)
GCA_029937475.1	JAPYPW000000000	SAMN30800971	PW10.metabat2.159	Rhodospirillales bacterium
GCA_029936735.1	JAPYSA000000000	SAMN30801027	PW3.metabat2.80_sub	Rhodospirillales bacterium
GCA_029937035.1	JAPYRD000000000	SAMN30801004	PW3.maxbin2.242_sub	Roseibacillus sp.
GCA_029940595.1	JAPYUJ000000000	SAMN30801088	PW8.maxbin2.212	Roseibacillus sp.
GCA_029937585.1	JAPYPP000000000	SAMN30800964	PW10.concoct.229_sub	Roseovarius sp.
GCA_029937275.1	JAPYQL000000000	SAMN30800986	PW2.metabat2.168	Sphingobium sp.
GCA_029936235.1	JAPYUC000000000	SAMN30801081	PW8.concoct.47	Sulfitobacter sp.
GCA_029937355.1	JAPYQC000000000	SAMN30800977	PW2.concoct.4_sub	Sulfitobacter sp.
GCA_029941295.1	JAPYQI000000000	SAMN30800983	PW2.maxbin2.184	Sulfurimonas sp.
GCA_029937595.1	JAPYPQ000000000	SAMN30800965	PW10.concoct.46	Synechococcus sp. PW10.concoct.46
GCA_029937795.1	JAPYPF000000000	SAMN30800954	PW1.maxbin2.058	Verrucomicrobiales bacterium
GCA_029937085.1	JAPYRA000000000	SAMN30801001	PW3.concoct.97_sub	Verrucomicrobiales bacterium
GCA_029936835.1	JAPYRV000000000	SAMN30801022	PW3.metabat2.23_sub	Verrucomicrobiales bacterium
GCA_029940475.1	JAPYUT000000000	SAMN30801098	PW8.metabat2.79_sub	Verrucomicrobiales bacterium
GCA_029940615.1	JAPYUG000000000	SAMN30801085	PW8.maxbin2.036_sub	Verrucomicrobiales bacterium
GCA_029940535.1	JAPYUM000000000	SAMN30801091	PW8.metabat2.112	Vicinamibacterales bacterium
GCA_029941605.1	JAPYSQ000000000	SAMN30801043	PW5.concoct.28_sub	bacterium
GCA_029941585.1	JAPYSP000000000	SAMN30801042	PW5.concoct.201	bacterium
GCA_029936035.1	JAPOGK000000000	SAMN31801952	RR2107-PW3	hydrothermal vent metagenome
GCA_029936055.1	JAPOGI000000000	SAMN31801950	RR2107-PW1	hydrothermal vent metagenome
GCA_029936105.1	JAPOGH000000000	SAMN31801949	RR2107-MOW	hydrothermal vent metagenome
GCA_029936015.1	JAPOGJ000000000	SAMN31801951	RR2107-PW2	hydrothermal vent metagenome
GCA_029935995.1	JAPOGL000000000	SAMN31801953	RR2107-PW4	hydrothermal vent metagenome
GCA_029935975.1	JAPOGM000000000	SAMN31801954	RR2107-PW5	hydrothermal vent metagenome
GCA_029935955.1	JAPOGN000000000	SAMN31801955	RR2107-PW6	hydrothermal vent metagenome
GCA_029935935.1	JAPOGP000000000	SAMN31801957	RR2107-PW8	hydrothermal vent metagenome
GCA_029935915.1	JAPOGQ000000000	SAMN31801958	RR2107-PW10	hydrothermal vent metagenome
GCA_029935895.1	JAPOGO000000000	SAMN31801956	RR2107-PW7	hydrothermal vent metagenome

SRA Data Details

Parameter	Value
Data volume, Gbases	616
Data volume, Tbytes	0.21

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