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Accession: PRJEB57940 ID: 907689

EMG produced TPA metagenomics assembly of PRJNA799796 data set (Mouse fecal sample Raw sequence reads).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA799796, and was assembled with metaSPAdes v3. More...
AccessionPRJEB57940
Data TypeGenome sequencing and assembly
ScopeMonoisolate
KeywordTPA:assembly
PublicationsMitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
SubmissionRegistration date: 2-Dec-2022
EMG
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)6158
WGS master268
Publications
PubMed1
PMC1
Other datasets
BioSample268
Assembly268
Assembly details:
Assembly levelNumber of Assemblies
268
268
AssemblyLevelWGSBioSampleTaxonomy
GCA_947647905.1ContigCANSLY000000000SAMEA112247684
GCA_947644035.1ContigCANRXW000000000SAMEA112247665
GCA_948445075.1ContigCAOJVW000000000SAMEA112247506
GCA_947644235.1ContigCANRYR000000000SAMEA112247532
GCA_947644335.1ContigCANRZA000000000SAMEA112247474
GCA_947645415.1ContigCANSCQ000000000SAMEA112247578
GCA_947645735.1ContigCANSDU000000000SAMEA112247544
GCA_947645945.1ContigCANSER000000000SAMEA112247531
GCA_947653715.1ContigCANTJH000000000SAMEA112247504
GCA_947653785.1ContigCANTJQ000000000SAMEA112247543
GCA_947645695.1ContigCANSDT000000000SAMEA112247574
GCA_947645835.1ContigCANSEF000000000SAMEA112247534
GCA_947645435.1ContigCANSCS000000000SAMEA112247600
GCA_947643955.1ContigCANRXR000000000SAMEA112247657
GCA_947644515.1ContigCANRZS000000000SAMEA112247700
GCA_947644065.1ContigCANRYC000000000SAMEA112247696
GCA_947645885.1ContigCANSEL000000000SAMEA112247519
GCA_947641855.1ContigCANRRG000000000SAMEA112247647
GCA_948437905.1ContigCAOJKH000000000SAMEA112247591
GCA_947646025.1ContigCANSEX000000000SAMEA112247507
GCA_947645915.1ContigCANSEN000000000SAMEA112247527
GCA_948435835.1ContigCAOJHD000000000SAMEA112247615
GCA_947645925.1ContigCANSEP000000000SAMEA112247521
GCA_948437455.1ContigCAOJJJ000000000SAMEA112247641
GCA_947654335.1ContigCANTKI000000000SAMEA112247682
GCA_947644445.1ContigCANRZJ000000000SAMEA112247707
GCA_947645645.1ContigCANSDN000000000SAMEA112247595
GCA_948436515.1ContigCAOJID000000000SAMEA112247656
GCA_947653905.1ContigCANTIM000000000SAMEA112247681
GCA_947644105.1ContigCANRYF000000000SAMEA112247631
GCA_948468165.1ContigCAOKHC000000000SAMEA112247620
GCA_947643915.1ContigCANRXM000000000SAMEA112247673
GCA_947648075.1ContigCANSMM000000000SAMEA112247629
GCA_948444835.1ContigCAOJVC000000000SAMEA112247508
GCA_948444905.1ContigCAOJVJ000000000SAMEA112247634
GCA_947647955.1ContigCANSMC000000000SAMEA112247643
GCA_947654115.1ContigCANTJY000000000SAMEA112247654
GCA_947646085.1ContigCANSFF000000000SAMEA112247483
GCA_947653935.1ContigCANTIO000000000SAMEA112247614
GCA_948444875.1ContigCAOJVF000000000SAMEA112247535
GCA_947645905.1ContigCANSEO000000000SAMEA112247525
GCA_947653975.1ContigCANTID000000000SAMEA112247619
GCA_948466405.1ContigCAOKAH000000000SAMEA112247486
GCA_947647345.1ContigCANSKE000000000SAMEA112247639
GCA_947645955.1ContigCANSET000000000SAMEA112247502
GCA_947643975.1ContigCANRXP000000000SAMEA112247689
GCA_947653745.1ContigCANTIP000000000SAMEA112247575
GCA_948439315.1ContigCAOJMX000000000SAMEA112247674
GCA_947645935.1ContigCANSEQ000000000SAMEA112247520
GCA_947648155.1ContigCANSMS000000000SAMEA112247621
GCA_947654235.1ContigCANTKH000000000SAMEA112247733
GCA_947645425.1ContigCANSCY000000000SAMEA112247599
GCA_947645985.1ContigCANSEU000000000SAMEA112247485
GCA_947643935.1ContigCANRXO000000000SAMEA112247670
GCA_947646175.1ContigCANSFP000000000SAMEA112247478
GCA_947654055.1ContigCANTJA000000000SAMEA112247646
GCA_948445035.1ContigCAOJVU000000000SAMEA112247553
GCA_947647315.1ContigCANSJX000000000SAMEA112247630
GCA_947654125.1ContigCANTJW000000000SAMEA112247685
GCA_948470925.1ContigCAOKQO000000000SAMEA112247648
GCA_947645675.1ContigCANSDP000000000SAMEA112247679
GCA_947654185.1ContigCANTJX000000000SAMEA112247632
GCA_947646015.1ContigCANSEY000000000SAMEA112247510
GCA_948438225.1ContigCAOJKX000000000SAMEA112247669
GCA_948444925.1ContigCAOJVK000000000SAMEA112247524
GCA_947654085.1ContigCANTJE000000000SAMEA112247664
GCA_947641595.1ContigCANRQT000000000SAMEA112247605
GCA_947645855.1ContigCANSEH000000000SAMEA112247533
GCA_947644355.1ContigCANRYX000000000SAMEA112247618
GCA_947643965.1ContigCANRYB000000000SAMEA112247692
GCA_948445055.1ContigCAOJWD000000000SAMEA112247512
GCA_948435565.1ContigCAOJGT000000000SAMEA112247719
GCA_948465945.1ContigCAOJYO000000000SAMEA112247666
GCA_948469785.1ContigCAOKMO000000000SAMEA112247608
GCA_948469765.1ContigCAOKML000000000SAMEA112247475
GCA_948435745.1ContigCAOJGZ000000000SAMEA112247675
GCA_948436145.1ContigCAOJHS000000000SAMEA112247576
GCA_948439325.1ContigCAOJMW000000000SAMEA112247498
GCA_948436405.1ContigCAOJHZ000000000SAMEA112247607
GCA_948436125.1ContigCAOJHT000000000SAMEA112247548
GCA_948444885.1ContigCAOJVI000000000SAMEA112247555
GCA_948438625.1ContigCAOJLP000000000SAMEA112247727
GCA_948438205.1ContigCAOJKZ000000000SAMEA112247714
GCA_947653635.1ContigCANTHW000000000SAMEA112247549
GCA_947653795.1ContigCANTJL000000000SAMEA112247570
GCA_947654155.1ContigCANTKK000000000SAMEA112247536
GCA_947653875.1ContigCANTIK000000000SAMEA112247704
GCA_947654245.1ContigCANTKJ000000000SAMEA112247528
GCA_947654175.1ContigCANTKD000000000SAMEA112247721
GCA_947654255.1ContigCANTKP000000000SAMEA112247625
GCA_947654215.1ContigCANTKG000000000SAMEA112247713
GCA_947647405.1ContigCANSKB000000000SAMEA112247636
GCA_947644075.1ContigCANRYD000000000SAMEA112247651
GCA_947644115.1ContigCANRYH000000000SAMEA112247637
GCA_947645995.1ContigCANSFE000000000SAMEA112247490
GCA_947645795.1ContigCANSED000000000SAMEA112247577
GCA_947645505.1ContigCANSCZ000000000SAMEA112247571
GCA_947649815.1ContigCANSTB000000000SAMEA112247489
GCA_947645665.1ContigCANSDQ000000000SAMEA112247649
GCA_947644215.1ContigCANRYU000000000SAMEA112247617
GCA_947645765.1ContigCANSEA000000000SAMEA112247554
GCA_947645555.1ContigCANSDE000000000SAMEA112247659
GCA_947643885.1ContigCANRXK000000000SAMEA112247701
GCA_947645775.1ContigCANSEI000000000SAMEA112247545
GCA_947645655.1ContigCANSDO000000000SAMEA112247677
GCA_947645565.1ContigCANSDH000000000SAMEA112247604
GCA_947645395.1ContigCANSCN000000000SAMEA112247594
GCA_947645545.1ContigCANSDF000000000SAMEA112247662
GCA_947645635.1ContigCANSDK000000000SAMEA112247655
GCA_947644495.1ContigCANRZO000000000SAMEA112247552
GCA_947645755.1ContigCANSDV000000000SAMEA112247565
GCA_947644275.1ContigCANRYP000000000SAMEA112247616
GCA_947654065.1ContigCANTJR000000000SAMEA112247697
GCA_948437935.1ContigCAOJKJ000000000SAMEA112247623
GCA_948438185.1ContigCAOJKU000000000SAMEA112247703
GCA_948445115.1ContigCAOJWE000000000SAMEA112247470
GCA_948435735.1ContigCAOJGX000000000SAMEA112247709
GCA_948435575.1ContigCAOJGU000000000SAMEA112247699
GCA_947653575.1ContigCANTHT000000000SAMEA112247541
GCA_947645365.1ContigCANSCO000000000SAMEA112247558
GCA_947645685.1ContigCANSDR000000000SAMEA112247611
GCA_947646005.1ContigCANSEW000000000SAMEA112247509
GCA_947643945.1ContigCANRXN000000000SAMEA112247708
GCA_947645495.1ContigCANSDB000000000SAMEA112247568
GCA_947643995.1ContigCANRXU000000000SAMEA112247676
GCA_947644315.1ContigCANRYV000000000SAMEA112247567
GCA_947647895.1ContigCANSLZ000000000SAMEA112247690
GCA_947642445.1ContigCANRSF000000000SAMEA112247550
GCA_947644465.1ContigCANRZL000000000SAMEA112247705
GCA_947654375.1ContigCANTKS000000000SAMEA112247668
GCA_947653895.1ContigCANTIS000000000SAMEA112247672
GCA_947653925.1ContigCANTIY000000000SAMEA112247593
GCA_948444975.1ContigCAOJVP000000000SAMEA112247488
GCA_947646065.1ContigCANSFB000000000SAMEA112247501
GCA_947645965.1ContigCANSES000000000SAMEA112247480
GCA_947653825.1ContigCANTHR000000000SAMEA112247538
GCA_948438235.1ContigCAOJKW000000000SAMEA112247658
GCA_948445105.1ContigCAOJWC000000000SAMEA112247469
GCA_947645875.1ContigCANSEM000000000SAMEA112247515
GCA_948435995.1ContigCAOJHF000000000SAMEA112247542
GCA_947644005.1ContigCANRXV000000000SAMEA112247726
GCA_948445085.1ContigCAOJWA000000000SAMEA112247547
GCA_947644125.1ContigCANRYJ000000000SAMEA112247642
GCA_947645715.1ContigCANSDW000000000SAMEA112247584
GCA_947645745.1ContigCANSDX000000000SAMEA112247539
GCA_947654315.1ContigCANTKQ000000000SAMEA112247627
GCA_947649745.1ContigCANSSW000000000SAMEA112247496
GCA_947641775.1ContigCANRQW000000000SAMEA112247612
GCA_947653585.1ContigCANTHU000000000SAMEA112247482
GCA_947645625.1ContigCANSDM000000000SAMEA112247598
GCA_947645455.1ContigCANSCU000000000SAMEA112247589
GCA_947644775.1ContigCANSAS000000000SAMEA112247728
GCA_947648095.1ContigCANSMQ000000000SAMEA112247624
GCA_947643545.1ContigCANRWL000000000SAMEA112247735
GCA_947645465.1ContigCANSCW000000000SAMEA112247586
GCA_948445095.1ContigCAOJVZ000000000SAMEA112247678
GCA_947644025.1ContigCANRYA000000000SAMEA112247661
GCA_947646035.1ContigCANSEZ000000000SAMEA112247513
GCA_947642175.1ContigCANRRT000000000SAMEA112247546
GCA_947645485.1ContigCANSDA000000000SAMEA112247583
GCA_947644045.1ContigCANRXY000000000SAMEA112247680
GCA_947645605.1ContigCANSDL000000000SAMEA112247606
GCA_947643755.1ContigCANRXE000000000SAMEA112247715
GCA_947645785.1ContigCANSEB000000000SAMEA112247557
GCA_947642125.1ContigCANRRZ000000000SAMEA112247695
GCA_947644865.1ContigCANSBI000000000SAMEA112247731
GCA_947644085.1ContigCANRYE000000000SAMEA112247653
GCA_947643565.1ContigCANRWM000000000SAMEA112247720
GCA_947641615.1ContigCANRRL000000000SAMEA112247610
GCA_947646135.1ContigCANSFL000000000SAMEA112247473
GCA_947644135.1ContigCANRYI000000000SAMEA112247645
GCA_947646075.1ContigCANSFD000000000SAMEA112247493
GCA_947643985.1ContigCANRXS000000000SAMEA112247710
GCA_947645845.1ContigCANSEG000000000SAMEA112247564
GCA_947643925.1ContigCANRXQ000000000SAMEA112247730
GCA_947645815.1ContigCANSEC000000000SAMEA112247580
GCA_947654095.1ContigCANTJT000000000SAMEA112247603
GCA_947653735.1ContigCANTJF000000000SAMEA112247516
GCA_947653855.1ContigCANTIF000000000SAMEA112247530
GCA_947653655.1ContigCANTHY000000000SAMEA112247518
GCA_947653625.1ContigCANTHZ000000000SAMEA112247526
GCA_947654075.1ContigCANTJU000000000SAMEA112247698
GCA_947653695.1ContigCANTJK000000000SAMEA112247560
GCA_947653615.1ContigCANTIA000000000SAMEA112247500
GCA_947653945.1ContigCANTIW000000000SAMEA112247609
GCA_947653805.1ContigCANTJP000000000SAMEA112247491
GCA_947654285.1ContigCANTKL000000000SAMEA112247492
GCA_947653995.1ContigCANTIZ000000000SAMEA112247601
GCA_948437475.1ContigCAOJKE000000000SAMEA112247660
GCA_948436185.1ContigCAOJHX000000000SAMEA112247587
GCA_948435615.1ContigCAOJGV000000000SAMEA112247687
GCA_948444865.1ContigCAOJVE000000000SAMEA112247494
GCA_948437955.1ContigCAOJKL000000000SAMEA112247613
GCA_948445045.1ContigCAOJVV000000000SAMEA112247523
GCA_948444895.1ContigCAOJVG000000000SAMEA112247566
GCA_948437755.1ContigCAOJKC000000000SAMEA112247511
GCA_948466245.1ContigCAOJZT000000000SAMEA112247596
GCA_948471535.1ContigCAOKTC000000000SAMEA112247652
GCA_948468655.1ContigCAOKIW000000000SAMEA112247718
GCA_948469435.1ContigCAOKLS000000000SAMEA112247572
GCA_947645375.1ContigCANSCP000000000SAMEA112247573
GCA_947645705.1ContigCANSDS000000000SAMEA112247592
GCA_947649775.1ContigCANSSY000000000SAMEA112247472
GCA_947649785.1ContigCANSTA000000000SAMEA112247479
GCA_947654195.1ContigCANTJZ000000000SAMEA112247638
GCA_948471065.1ContigCAOKQX000000000SAMEA112247582
GCA_948468895.1ContigCAOKJX000000000SAMEA112247628
GCA_948435805.1ContigCAOJHB000000000SAMEA112247481
GCA_948445025.1ContigCAOJVY000000000SAMEA112247561
GCA_948435795.1ContigCAOJHA000000000SAMEA112247585
GCA_947642575.1ContigCANRTD000000000SAMEA112247540
GCA_947654275.1ContigCANTJS000000000SAMEA112247688
GCA_947654135.1ContigCANTKA000000000SAMEA112247706
GCA_947649685.1ContigCANSSU000000000SAMEA112247495
GCA_947645805.1ContigCANSDY000000000SAMEA112247551
GCA_948445125.1ContigCAOJWB000000000SAMEA112247597
GCA_948438165.1ContigCAOJKS000000000SAMEA112247663
GCA_948435825.1ContigCAOJHC000000000SAMEA112247633
GCA_948470535.1ContigCAOKPB000000000SAMEA112247729
GCA_948468105.1ContigCAOKHE000000000SAMEA112247503
GCA_947654225.1ContigCANTKE000000000SAMEA112247650
GCA_947644095.1ContigCANRYG000000000SAMEA112247635
GCA_947645895.1ContigCANSEK000000000SAMEA112247514
GCA_947648105.1ContigCANSMP000000000SAMEA112247722
GCA_947649855.1ContigCANSTE000000000SAMEA112247484
GCA_947643905.1ContigCANRXL000000000SAMEA112247724
GCA_947643855.1ContigCANRXH000000000SAMEA112247736
GCA_947646055.1ContigCANSFC000000000SAMEA112247487
GCA_947644255.1ContigCANRYN000000000SAMEA112247626
GCA_947643655.1ContigCANRWS000000000SAMEA112247717
GCA_947643665.1ContigCANRWW000000000SAMEA112247712
GCA_947645825.1ContigCANSEE000000000SAMEA112247537
GCA_948435725.1ContigCAOJGY000000000SAMEA112247711
GCA_948437685.1ContigCAOJKI000000000SAMEA112247529
GCA_948444915.1ContigCAOJVH000000000SAMEA112247517
GCA_947645865.1ContigCANSEJ000000000SAMEA112247522
GCA_947645975.1ContigCANSEV000000000SAMEA112247499
GCA_947653965.1ContigCANTIC000000000SAMEA112247723
GCA_947645575.1ContigCANSDG000000000SAMEA112247667
GCA_948437745.1ContigCAOJKB000000000SAMEA112247556
GCA_948445065.1ContigCAOJVX000000000SAMEA112247497
GCA_948438665.1ContigCAOJLU000000000SAMEA112247732
GCA_947644055.1ContigCANRXX000000000SAMEA112247683
GCA_947643875.1ContigCANRXJ000000000SAMEA112247702
GCA_947653815.1ContigCANTHS000000000SAMEA112247693
GCA_948438195.1ContigCAOJKT000000000SAMEA112247694
GCA_947645615.1ContigCANSDI000000000SAMEA112247671
GCA_947645405.1ContigCANSCR000000000SAMEA112247559
GCA_947646045.1ContigCANSFA000000000SAMEA112247505
GCA_947644205.1ContigCANRYW000000000SAMEA112247622
GCA_947653915.1ContigCANTIJ000000000SAMEA112247640
GCA_947654365.1ContigCANTKR000000000SAMEA112247691
GCA_947653675.1ContigCANTIV000000000SAMEA112247477
GCA_947653665.1ContigCANTIB000000000SAMEA112247562
GCA_947654325.1ContigCANTKM000000000SAMEA112247579
GCA_947653845.1ContigCANTII000000000SAMEA112247644
GCA_947654025.1ContigCANTJG000000000SAMEA112247588
GCA_947654205.1ContigCANTJO000000000SAMEA112247476
GCA_947645525.1ContigCANSDC000000000SAMEA112247563
GCA_947645725.1ContigCANSDZ000000000SAMEA112247590
GCA_947643895.1ContigCANRXT000000000SAMEA112247734
GCA_947644015.1ContigCANRXZ000000000SAMEA112247716
GCA_947647845.1ContigCANSLV000000000SAMEA112247686
GCA_948438265.1ContigCAOJKV000000000SAMEA112247569
GCA_948438685.1ContigCAOJLS000000000SAMEA112247725
GCA_948444825.1ContigCAOJUZ000000000SAMEA112247471
GCA_948437705.1ContigCAOJJZ000000000SAMEA112247581
GCA_948435845.1ContigCAOJHE000000000SAMEA112247602

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