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Accession: PRJDB4188 ID: 308346

Acropora digitifera

Acropora digitifera population genomics project

See Genome Information for Acropora digitifera
Using the decoded genome of A. digitifera, we performed the first genome-wide SNP analysis of corals and succeeded in mapping detailed population structure and migration patterns of A. digitifera in the Ryukyu Archipelago.
AccessionPRJDB4188
Data TypeGenome sequencing
ScopeMonoisolate
OrganismAcropora digitifera[Taxonomy ID: 70779]
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Acroporidae; Acropora; Acropora digitifera
PublicationsShinzato C et al., "Genome-wide SNP analysis explains coral diversity and recovery in the Ryukyu Archipelago.", Sci Rep, 2015 Dec 10;5:18211
SubmissionRegistration date: 8-Jan-2016
Marine Genomics Unit, Okinawa Institute of Science and Technology
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments303
Publications
PubMed1
PMC1
Other datasets
BioSample301
SRA Data Details
ParameterValue
Data volume, Gbases2,375
Data volume, Tbytes1.37

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