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Accession: PRJNA923804 ID: 923804

Sequencing and assembly of Borrelia burgdroferi sensu stricto genomes from patients with Lyme disease

Sequencing and assembly of Borrelia burgdroferi sensu stricto genomes from patients with Lyme disease
AccessionPRJNA923804
Data TypeGenome sequencing and assembly
ScopeMultispecies
Grants
  • "Microbial Determinants of Clinical Heterogeneity in Lyme Disease" (Grant ID K99 AI148604, National Institute of Allergy and Infectious Diseases Extramural Activities)
  • "Microbial Determinants of Clinical Heterogeneity in Lyme Disease" (Grant ID R00 AI148604, National Institute of Allergy and Infectious Diseases Extramural Activities)
SubmissionRegistration date: 14-Jan-2023
Broad Institute
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)259
SRA Experiments299
Other datasets
BioSample299
Assembly259
Assembly details:
Assembly levelNumber of Assemblies
258
258
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_030073335.1ContigJARFEF000000000SAMN32739630
URI122
GCA_030073325.1ContigJARFED000000000SAMN32739632
UNY129
GCA_030073305.1ContigJARFEC000000000SAMN32739633
UNY130
GCA_030073285.1ContigJARFEA000000000SAMN32739635
UNY132
GCA_030073235.1ContigJARFDY000000000SAMN32739637
UNY134
GCA_030073225.1ContigJARFDX000000000SAMN32739638
UNY135
GCA_030073245.1ContigJARFDV000000000SAMN32739640
UNY137
GCA_030073205.1ContigJARFDU000000000SAMN32739641
UNY138
GCA_030073185.1ContigJARFDS000000000SAMN32739643
UNY140
GCA_030073135.1ContigJARFDQ000000000SAMN32739645
UNY142
GCA_030073145.1ContigJARFDR000000000SAMN32739644
UNY141
GCA_030073125.1ContigJARFDP000000000SAMN32739646
UNY143
GCA_030073105.1ContigJARFDO000000000SAMN32739647
UNY144
GCA_030073045.1ContigJARFDM000000000SAMN32739649
UNY146
GCA_030073065.1ContigJARFDL000000000SAMN32739650
UNY147
GCA_030073055.1ContigJARFDN000000000SAMN32739648
UNY145
GCA_030073025.1ContigJARFDK000000000SAMN32739651
UNY148
GCA_030073005.1ContigJARFDJ000000000SAMN32739652
UNY149
GCA_030072935.1ContigJARFDH000000000SAMN32739654
UNY151
GCA_030072955.1ContigJARFDG000000000SAMN32739655
UNY152
GCA_030072965.1ContigJARFDF000000000SAMN32739656
UNY153
GCA_030072925.1ContigJARFDI000000000SAMN32739653
UNY150
GCA_030072905.1ContigJARFDE000000000SAMN32739657
UNY154
GCA_030072865.1ContigJARFDB000000000SAMN32739660
UNY157
GCA_030072875.1ContigJARFDD000000000SAMN32739658
UNY155
GCA_030072825.1ContigJARFCY000000000SAMN32739663
UNY160
GCA_030072815.1ContigJARFDC000000000SAMN32739659
UNY156
GCA_030072805.1ContigJARFDA000000000SAMN32739661
UNY158
GCA_030072785.1ContigJARFCZ000000000SAMN32739662
UNY159
GCA_030072765.1ContigJARFCX000000000SAMN32739664
UNY161
GCA_030072725.1ContigJARFCV000000000SAMN32739666
UNY163
GCA_030072735.1ContigJARFCW000000000SAMN32739665
UNY162
GCA_030072695.1ContigJARFCT000000000SAMN32739668
UNY165
GCA_030072685.1ContigJARFCU000000000SAMN32739667
UNY164
GCA_030072665.1ContigJARFCO000000000SAMN32739673
UNY170
GCA_030072645.1ContigJARFCS000000000SAMN32739669
UNY166
GCA_030072625.1ContigJARFCR000000000SAMN32739670
UNY167
GCA_030072585.1ContigJARFCP000000000SAMN32739672
UNY169
GCA_030072595.1ContigJARFCQ000000000SAMN32739671
UNY168
GCA_030072565.1ContigJARFCM000000000SAMN32739675
UNY172
GCA_030072545.1ContigJARFCN000000000SAMN32739674
UNY171
GCA_030072525.1ContigJARFCK000000000SAMN32739677
UNY174
GCA_030072505.1ContigJARFCL000000000SAMN32739676
UNY173
GCA_030072445.1ContigJARFCG000000000SAMN32739681
UNY178
GCA_030072455.1ContigJARFCJ000000000SAMN32739678
UNY175
GCA_030072435.1ContigJARFCI000000000SAMN32739679
UNY176
GCA_030072415.1ContigJARFCF000000000SAMN32739682
UNY179
GCA_030072405.1ContigJARFCH000000000SAMN32739680
UNY177
GCA_030072385.1ContigJARFCE000000000SAMN32739683
UNY180
GCA_030072325.1ContigJARFCB000000000SAMN32739686
UNY183
GCA_030072335.1ContigJARFCC000000000SAMN32739685
UNY182
GCA_030072315.1ContigJARFCD000000000SAMN32739684
UNY181
GCA_030072305.1ContigJARFBY000000000SAMN32739689
UNY187
GCA_030072285.1ContigJARFCA000000000SAMN32739687
UNY184
GCA_030072245.1ContigJARFBX000000000SAMN32739690
UNY188
GCA_030072255.1ContigJARFBZ000000000SAMN32739688
UNY185
GCA_030072225.1ContigJARFBW000000000SAMN32739691
UNY189
GCA_030072205.1ContigJARFBV000000000SAMN32739692
UNY190
GCA_030072175.1ContigJARFBU000000000SAMN32739693
UNY191
GCA_030072165.1ContigJARFBT000000000SAMN32739694
UNY192
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UNY194
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UNY193
GCA_030072105.1ContigJARFBQ000000000SAMN32739697
UNY195
GCA_030072085.1ContigJARFBP000000000SAMN32739699
UNY197
GCA_030072065.1ContigJARFBO000000000SAMN32739700
UNY199
GCA_030072045.1ContigJARFBN000000000SAMN32739701
UNY200
GCA_030072025.1ContigJARFBM000000000SAMN32739702
UNY201
GCA_030072005.1ContigJARFBL000000000SAMN32739703
UNY202
GCA_030071985.1ContigJARFBK000000000SAMN32739704
UNY203
GCA_030071965.1ContigJARFBJ000000000SAMN32739705
UNY204
GCA_030071945.1ContigJARFBI000000000SAMN32739706
UNY205
GCA_030071925.1ContigJARFBH000000000SAMN32739707
UNY206
GCA_030071905.1ContigJARFBG000000000SAMN32739708
UNY207
GCA_030071885.1ContigJARFBE000000000SAMN32739710
UNY209
GCA_030071865.1ContigJARFBF000000000SAMN32739709
UNY208
GCA_030071845.1ContigJARFBA000000000SAMN32739714
UNY213
GCA_030071825.1ContigJARFBD000000000SAMN32739711
UNY210
GCA_030071805.1ContigJARFBC000000000SAMN32739712
UNY211
GCA_030071775.1ContigJARFBB000000000SAMN32739713
UNY212
GCA_030071765.1ContigJARFAZ000000000SAMN32739715
UNY214
GCA_030071745.1ContigJARFAY000000000SAMN32739717
UNY216
GCA_030071725.1ContigJARFAX000000000SAMN32739718
UNY217
GCA_030071685.1ContigJARFAW000000000SAMN32739719
UNY218
GCA_030071665.1ContigJARFAU000000000SAMN32739721
UWI220
GCA_030071675.1ContigJARFAV000000000SAMN32739720
URI219
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UWI221
GCA_030071625.1ContigJARFAS000000000SAMN32739723
UWI222
GCA_030071605.1ContigJARFAQ000000000SAMN32739725
UWI224
GCA_030071585.1ContigJARFAP000000000SAMN32739726
UWI225
GCA_030071565.1ContigJARFAR000000000SAMN32739724
UWI223
GCA_030071545.1ContigJARFAM000000000SAMN32739729
UWI228
GCA_030071515.1ContigJARFAO000000000SAMN32739727
UWI226
GCA_030071505.1ContigJARFAL000000000SAMN32739730
UWI229
GCA_030071465.1ContigJARFAK000000000SAMN32739731
UWI230
GCA_030071475.1ContigJARFAN000000000SAMN32739728
UWI227
GCA_030071445.1ContigJARFAJ000000000SAMN32739732
UWI231
GCA_030071425.1ContigJARFAH000000000SAMN32739734
UWI233
GCA_030071395.1ContigJARFAI000000000SAMN32739733
UWI232
GCA_030071375.1ContigJARFAD000000000SAMN32739738
UWI237
GCA_030071355.1ContigJARFAF000000000SAMN32739736
UWI235
GCA_030071345.1ContigJARFAG000000000SAMN32739735
UWI234
GCA_030071325.1ContigJARFAA000000000SAMN32739741
UWI240
GCA_030071305.1ContigJARFAE000000000SAMN32739737
UWI236
GCA_030071265.1ContigJARFAC000000000SAMN32739739
UWI238
GCA_030071275.1ContigJARFAB000000000SAMN32739740
UWI239
GCA_030071245.1ContigJAREZZ000000000SAMN32739742
UWI241
GCA_030071215.1ContigJAREZX000000000SAMN32739744
UWI243
GCA_030071205.1ContigJAREZY000000000SAMN32739743
UWI242
GCA_030071185.1ContigJAREZW000000000SAMN32739745
UWI244
GCA_030071165.1ContigJAREZV000000000SAMN32739746
UWI245
GCA_030071145.1ContigJAREZU000000000SAMN32739747
UWI246
GCA_030071115.1ContigJAREZT000000000SAMN32739748
UWI247
GCA_030071105.1ContigJAREZN000000000SAMN32739754
UWI253
GCA_030071085.1ContigJAREZS000000000SAMN32739749
UWI248
GCA_030071065.1ContigJAREZR000000000SAMN32739750
UWI249
GCA_030071045.1ContigJAREZP000000000SAMN32739752
UWI251
GCA_030071025.1ContigJAREZQ000000000SAMN32739751
UWI250
GCA_030071005.1ContigJAREZO000000000SAMN32739753
UWI252
GCA_030070985.1ContigJAREZM000000000SAMN32739755
UWI254
GCA_030070955.1ContigJAREZK000000000SAMN32739757
UWI256
GCA_030070945.1ContigJAREZL000000000SAMN32739756
UWI255
GCA_030070915.1ContigJAREZI000000000SAMN32739759
UWI258
GCA_030070905.1ContigJAREZJ000000000SAMN32739758
UWI257
GCA_030070885.1ContigJAREZH000000000SAMN32739760
UWI260
GCA_030070845.1ContigJAREZF000000000SAMN32739763
UWI263
GCA_030070855.1ContigJAREZG000000000SAMN32739761
UWI261
GCA_030070815.1ContigJAREZD000000000SAMN32739765
UWI265
GCA_030070795.1ContigJAREZE000000000SAMN32739764
UWI264
GCA_030070785.1ContigJAREYZ000000000SAMN32739770
UWI271
GCA_030070765.1ContigJAREZB000000000SAMN32739767
UWI268
GCA_030070745.1ContigJAREZC000000000SAMN32739766
UWI267
GCA_030070725.1ContigJAREZA000000000SAMN32739768
UWI269
GCA_030070705.1ContigJAREYY000000000SAMN32739771
UWI272
GCA_030070685.1ContigJAREYW000000000SAMN32739774
UWI275
GCA_030070665.1ContigJAREYX000000000SAMN32739773
UWI274
GCA_030070645.1ContigJAREYV000000000SAMN32739775
UWI276
GCA_030070615.1ContigJAREYU000000000SAMN32739776
UWI277
GCA_030070605.1ContigJAREYT000000000SAMN32739777
UWI278
GCA_030070575.1ContigJAREYS000000000SAMN32739778
UWI279
GCA_030070565.1ContigJAREYR000000000SAMN32739779
UWI280
GCA_030070545.1ContigJAREYQ000000000SAMN32739780
UWI281
GCA_030070515.1ContigJAREYO000000000SAMN32739782
UWI283
GCA_030070505.1ContigJAREYP000000000SAMN32739781
UWI282
GCA_030070465.1ContigJAREYG000000000SAMN32739791
ESI292
GCA_030070475.1ContigJAREYN000000000SAMN32739783
ESI284
GCA_030070445.1ContigJAREYL000000000SAMN32739785
ESI286
GCA_030070425.1ContigJAREYK000000000SAMN32739786
ESI287
GCA_030070405.1ContigJAREYM000000000SAMN32739784
ESI285
GCA_030070385.1ContigJAREYJ000000000SAMN32739787
ESI288a
GCA_030070345.1ContigJAREYI000000000SAMN32739788
ESI289
GCA_030070355.1ContigJAREYF000000000SAMN32739792
ESI294
GCA_030070315.1ContigJAREYH000000000SAMN32739789
ESI290
GCA_030070305.1ContigJAREYE000000000SAMN32739793
ESI295
GCA_030075815.1ContigJARFIC000000000SAMN32739519
UMA2
GCA_030075805.1ContigJARFIB000000000SAMN32739521
UMA4
GCA_030075785.1ContigJARFHZ000000000SAMN32739523
UMA7
GCA_030075745.1ContigJARFHY000000000SAMN32739524
UMA8
GCA_030075755.1ContigJARFIA000000000SAMN32739522
UMA5
GCA_030075715.1ContigJARFHX000000000SAMN32739525
UMA9
GCA_030075705.1ContigJARFHW000000000SAMN32739528
UMA12
GCA_030075675.1ContigJARFHV000000000SAMN32739529
UMA13
GCA_030075665.1ContigJARFHT000000000SAMN32739532
UMA16
GCA_030075645.1ContigJARFHU000000000SAMN32739530
UMA14
GCA_030075615.1ContigJARFHQ000000000SAMN32739535
URI20
GCA_030075605.1ContigJARFHS000000000SAMN32739533
URI17
GCA_030075585.1ContigJARFHR000000000SAMN32739534
URI19
GCA_030075555.1ContigJARFHO000000000SAMN32739537
URI23
GCA_030075545.1ContigJARFHP000000000SAMN32739536
URI22
GCA_030075525.1ContigJARFHN000000000SAMN32739538
URI24
GCA_030075505.1ContigJARFHM000000000SAMN32739539
ESI26
GCA_030075485.1ContigJARFHL000000000SAMN32739540
ESI28
GCA_030075455.1ContigJARFHJ000000000SAMN32739542
UCT30
GCA_030075445.1ContigJARFHK000000000SAMN32739541
UCT29
GCA_030075425.1ContigJARFHI000000000SAMN32739543
UCT31
GCA_030075405.1ContigJARFHH000000000SAMN32739544
UCT32
GCA_030075385.1ContigJARFHG000000000SAMN32739545
URI33
GCA_030075365.1ContigJARFHF000000000SAMN32739546
URI34
GCA_030075335.1ContigJARFHE000000000SAMN32739547
UCT35
GCA_030075325.1ContigJARFHD000000000SAMN32739548
URI36
GCA_030075305.1ContigJARFHC000000000SAMN32739549
URI37
GCA_030075285.1ContigJARFHB000000000SAMN32739550
URI38
GCA_030075265.1ContigJARFGZ000000000SAMN32739553
URI41
GCA_030075245.1ContigJARFHA000000000SAMN32739552
URI40
GCA_030075225.1ContigJARFGY000000000SAMN32739554
URI42
GCA_030075205.1ContigJARFGX000000000SAMN32739555
URI43
GCA_030075185.1ContigJARFGV000000000SAMN32739557
URI46
GCA_030075145.1ContigJARFGW000000000SAMN32739556
URI44
GCA_030075155.1ContigJARFGU000000000SAMN32739558
URI47
GCA_030075125.1ContigJARFGT000000000SAMN32739559
URI48
GCA_030075105.1ContigJARFGS000000000SAMN32739560
URI49
GCA_030075085.1ContigJARFGR000000000SAMN32739561
UCT50
GCA_030075045.1ContigJARFGQ000000000SAMN32739562
UCT51
GCA_030075035.1ContigJARFGN000000000SAMN32739565
URI54
GCA_030075025.1ContigJARFGO000000000SAMN32739564
URI53
GCA_030075005.1ContigJARFGP000000000SAMN32739563
URI52
GCA_030074985.1ContigJARFGM000000000SAMN32739566
URI55
GCA_030074965.1ContigJARFGL000000000SAMN32739569
URI58
GCA_030074945.1ContigJARFGK000000000SAMN32739570
URI59
GCA_030074925.1ContigJARFGJ000000000SAMN32739571
URI60
GCA_030074905.1ContigJARFGH000000000SAMN32739573
UCT62
GCA_030074885.1ContigJARFGI000000000SAMN32739572
URI61
GCA_030074865.1ContigJARFGG000000000SAMN32739574
URI63
GCA_030074845.1ContigJARFGE000000000SAMN32739576
URI65
GCA_030074825.1ContigJARFGF000000000SAMN32739575
URI64
GCA_030074785.1ContigJARFGD000000000SAMN32739577
UCT66
GCA_030074795.1ContigJARFGC000000000SAMN32739578
URI67
GCA_030074765.1ContigJARFGB000000000SAMN32739579
URI68
GCA_030074735.1ContigJARFGA000000000SAMN32739580
UCT69
GCA_030074725.1ContigJARFFY000000000SAMN32739583
URI72
GCA_030074705.1ContigJARFFZ000000000SAMN32739581
URI70
GCA_030074685.1ContigJARFFX000000000SAMN32739584
UCT73
GCA_030074665.1ContigJARFFU000000000SAMN32739587
UCT76
GCA_030074645.1ContigJARFFW000000000SAMN32739585
UCT74
GCA_030074615.1ContigJARFFV000000000SAMN32739586
URI75
GCA_030074605.1ContigJARFFT000000000SAMN32739588
URI77
GCA_030074585.1ContigJARFFS000000000SAMN32739589
URI78
GCA_030074565.1ContigJARFFR000000000SAMN32739590
URI79
GCA_030074525.1ContigJARFFQ000000000SAMN32739591
URI81
GCA_030074505.1ContigJARFFN000000000SAMN32739594
URI85
GCA_030074495.1ContigJARFFP000000000SAMN32739592
UCT83
GCA_030074485.1ContigJARFFO000000000SAMN32739593
URI84
GCA_030074465.1ContigJARFFM000000000SAMN32739596
URI87
GCA_030074445.1ContigJARFFK000000000SAMN32739598
URI89
GCA_030074425.1ContigJARFFL000000000SAMN32739597
URI88
GCA_030074405.1ContigJARFFI000000000SAMN32739600
URI91
GCA_030074385.1ContigJARFFJ000000000SAMN32739599
URI90
GCA_030074365.1ContigJARFFH000000000SAMN32739601
UCT92
GCA_030074345.1ContigJARFFG000000000SAMN32739602
URI93
GCA_030074325.1ContigJARFFE000000000SAMN32739604
UCT96
GCA_030074295.1ContigJARFFF000000000SAMN32739603
URI94
GCA_030074285.1ContigJARFFD000000000SAMN32739605
URI97
GCA_030074265.1ContigJARFFC000000000SAMN32739606
URI98
GCA_030074245.1ContigJARFFB000000000SAMN32739607
URI99
GCA_030074205.1ContigJARFEZ000000000SAMN32739609
URI101
GCA_030074185.1ContigJARFEX000000000SAMN32739611
URI103
GCA_030074145.1ContigJARFEW000000000SAMN32739612
UCT104
GCA_030074165.1ContigJARFEY000000000SAMN32739610
URI102
GCA_030074125.1ContigJARFEV000000000SAMN32739613
URI105
GCA_030074105.1ContigJARFEU000000000SAMN32739614
UCT106
GCA_030074075.1ContigJARFER000000000SAMN32739617
UCT109
GCA_030074065.1ContigJARFET000000000SAMN32739615
URI107
GCA_030074045.1ContigJARFES000000000SAMN32739616
URI108
GCA_030074015.1ContigJARFEP000000000SAMN32739619
URI111
GCA_030074005.1ContigJARFEQ000000000SAMN32739618
UCT110
GCA_030073985.1ContigJARFEM000000000SAMN32739622
URI114
GCA_030073955.1ContigJARFEN000000000SAMN32739621
UCT113
GCA_030073945.1ContigJARFEO000000000SAMN32739620
URI112
GCA_030073925.1ContigJARFEL000000000SAMN32739623
UCT115
GCA_030073865.1ContigJARFEI000000000SAMN32739627
URI119
GCA_030073905.1ContigJARFEK000000000SAMN32739625
URI117
GCA_030073875.1ContigJARFEJ000000000SAMN32739626
URI118
GCA_030073845.1ContigJARFEH000000000SAMN32739628
URI120
GCA_030073825.1ContigJARFEG000000000SAMN32739629
UCT121
GCA_030073775.1ContigJARFEE000000000SAMN32739631
UMA127
GCA_030073785.1ContigJARFDZ000000000SAMN32739636
UNY133
GCA_030073765.1ContigJARFEB000000000SAMN32739634
UNY131
GCA_030073745.1ContigJARFDW000000000SAMN32739639
UNY136
GCA_030073725.1ContigJARFDT000000000SAMN32739642
UNY139
SRA Data Details
ParameterValue
Data volume, Gbases87
Data volume, Mbytes49965

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