ID 496652 - BioProject

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Accession: PRJEB26113 ID: 496652

EMG produced TPA metagenomics assembly of the Marine microbial communities from the Deep Pacific Ocean - MP2253 metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA329991. This project includes samples from the following biomes: Environmental, Aquatic, Marine.

Accession	PRJEB26113
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 16-Oct-2018 EMG
Locus Tag Prefix	Q1M67

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	19
Publications
PubMed	1
PMC	1
Other datasets
BioSample	19
Assembly	18

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

18
18

Assembly	WGS	BioSample	Taxonomy
GCA_950062305.1	CATLXW000000000	SAMEA112958361	uncultured Acidimicrobiia bacterium
GCA_950061875.1	CATLXC000000000	SAMEA112958347	uncultured Bacteriovoracaceae bacterium
GCA_950073655.1	CATMQS000000000	SAMEA112958359	uncultured Candidatus Poseidoniales archaeon
GCA_950073365.1	CATMQR000000000	SAMEA112958358	uncultured Candidatus Poseidoniales archaeon
GCA_950062215.1	CATLXG000000000	SAMEA112958364	uncultured Candidatus Poseidoniales archaeon
GCA_950061975.1	CATLXE000000000	SAMEA112958362	uncultured Fidelibacterota bacterium
GCA_950054515.1	CATLQG000000000	SAMEA112958348	uncultured Fidelibacterota bacterium
GCA_950061755.1	CATLWZ000000000	SAMEA112958354	uncultured Fidelibacterota bacterium
GCA_950073715.1	CATMQW000000000	SAMEA112958352	uncultured Gammaproteobacteria bacterium
GCA_950073515.1	CATMQM000000000	SAMEA112958351	uncultured Gammaproteobacteria bacterium
GCA_950061915.1	CATLXB000000000	SAMEA112958350	uncultured Gammaproteobacteria bacterium
GCA_950054105.1	CATLPI000000000	SAMEA112958353	uncultured Gammaproteobacteria bacterium
GCA_950061855.1	CATLWX000000000	SAMEA112958349	uncultured Gammaproteobacteria bacterium
GCA_950073705.1	CATMQX000000000	SAMEA112958357	uncultured Nitrospina sp.
GCA_950073695.1	CATMQZ000000000	SAMEA112958360	uncultured Pseudomonadaceae bacterium
GCA_950073765.1	CATMRA000000000	SAMEA112958363	uncultured Rhodococcus sp.
GCA_950070835.1	CATMMD000000000	SAMEA112958356	uncultured Verrucomicrobiota bacterium
GCA_950062085.1	CATLXF000000000	SAMEA112958355	uncultured archaeon

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EMG produced TPA metagenomics assembly of the Marine microbial communities from the Deep Pacific Ocean - MP2253 metagenome (marine metagenome) data set.

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