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Accession: PRJNA1023913 ID: 1023913

groundwater metagenome

Metagenomics assemblies of 32 groundwater samples from study: PRJEB36505

Metagenomics assemblies of 32 groundwater samples from study: PRJEB36505
AccessionPRJNA1023913
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismgroundwater metagenome[Taxonomy ID: 717931]
unclassified sequences; metagenomes; ecological metagenomes; groundwater metagenome
Publications
  • Chaudhari NM et al., "The economical lifestyle of CPR bacteria in groundwater allows little preference for environmental drivers.", Environ Microbiome, 2021 Dec 14;16(1):24
  • Published online: Overholt W et al., "Carbon fixation rates in groundwater similar to those in oligotrophic marine systems", Nature Geoscience, 2022;15(7):561-567
SubmissionRegistration date: 9-Apr-2024
Collaborative Research Centre AquaDiva
- Friedrich Schiller University Jena
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)1065
Publications
PubMed1
PMC1
Other datasets
BioSample1074
Assembly1065
Assembly details:
Assembly levelNumber of Assemblies
1039
26
1065
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_038068335.1ScaffoldJBBTMF000000000SAMN37688449
H14-bin060_1
GCA_038068275.1ScaffoldJBBTMI000000000SAMN37688452
H51-bin267_1
GCA_038068115.1ScaffoldJBBTMS000000000SAMN37688462
H51-bin246_1
GCA_038067675.1ScaffoldJBBTNT000000000SAMN37688489
H43-bin153_1
GCA_038067115.1ScaffoldJBBTOT000000000SAMN37688515
H41-bin201_1
GCA_038060875.1ScaffoldJBBTDS000000000SAMN37683297
H43-bin212_1
GCA_038059085.1ScaffoldJBBTKJ000000000SAMN37683470
H51-bin327_1
GCA_038042425.1ScaffoldJBBTEH000000000SAMN37683312
H43-bin207_1
GCA_038060735.1ScaffoldJBBTFE000000000SAMN37683335
H51-bin184
GCA_038060615.1ScaffoldJBBTGM000000000SAMN37683369
H41-bin188_1
GCA_038066075.1ScaffoldJBBTPS000000000SAMN37688540
H43-bin209_1
GCA_038068155.1ScaffoldJBBTMO000000000SAMN37688458
H51-bin335_1
GCA_038043125.1ScaffoldJBBTCS000000000SAMN37683271
H51-bin060_1
GCA_038042585.1ScaffoldJBBTDX000000000SAMN37683302
H52-bin138_1_1
GCA_038041185.1ScaffoldJBBTHG000000000SAMN37683389
H52-bin144_1
GCA_038059105.1ScaffoldJBBTKD000000000SAMN37683464
H52-bin068_1
GCA_038059755.1ScaffoldJBBTIV000000000SAMN37683430
H32-bin060_1
GCA_038059675.1ScaffoldJBBTJA000000000SAMN37683435
H32-bin070_1
GCA_038067855.1ScaffoldJBBTND000000000SAMN37688473
H41-bin018_1
GCA_038068495.1ScaffoldJBBTLW000000000SAMN37688440
H32-bin016_2
GCA_038067455.1ScaffoldJBBTOB000000000SAMN37688497
H52-bin090_2
GCA_038078915.1ScaffoldJBBTNM000000000SAMN37688482
H43-bin219
GCA_038066115.1ScaffoldJBBTPQ000000000SAMN37688538
H51-bin217_1
GCA_038066095.1ScaffoldJBBTPP000000000SAMN37688537
H41-bin058_1
GCA_038059575.1ScaffoldJBBTJF000000000SAMN37683440
H52-bin161_1
GCA_038059125.1ScaffoldJBBTKG000000000SAMN37683467
H51-bin275
GCA_038058895.1ScaffoldJBBTKR000000000SAMN37683478
H43-bin130
GCA_038058995.1ScaffoldJBBTKN000000000SAMN37683474
H51-bin279_1
GCA_038058855.1ScaffoldJBBTKU000000000SAMN37683481
H52-bin066_1
GCA_038041165.1ScaffoldJBBTHQ000000000SAMN37683399
H52-bin142_1
GCA_038041145.1ScaffoldJBBTHT000000000SAMN37683402
H43-bin141_1
GCA_038041735.1ScaffoldJBBTFT000000000SAMN37683350
H41-bin282
GCA_038041625.1ScaffoldJBBTGC000000000SAMN37683359
H43-bin173_1
GCA_038041465.1ScaffoldJBBTGL000000000SAMN37683368
H51-bin061_1
GCA_038042275.1ScaffoldJBBTEN000000000SAMN37683318
H41-bin069_1
GCA_038043105.1ScaffoldJBBTCR000000000SAMN37683270
H43-bin226_1
GCA_038043425.1ScaffoldJBBTBZ000000000SAMN37683252
H41-bin033_1
GCA_038066215.1ScaffoldJBBTPO000000000SAMN37688536
H52-bin158_1
GCA_038043185.1ScaffoldJBBTCO000000000SAMN37683267
H41-bin001_1
GCA_038042605.1ScaffoldJBBTDV000000000SAMN37683300
H43-bin162_1
GCA_038042485.1ScaffoldJBBTEG000000000SAMN37683311
H52-bin101_1
GCA_038042235.1ScaffoldJBBTEQ000000000SAMN37683321
H41-bin164_1
GCA_038041585.1ScaffoldJBBTGA000000000SAMN37683357
H41-bin117_1
GCA_038041655.1ScaffoldJBBTFZ000000000SAMN37683356
H51-bin146
GCA_038059975.1ScaffoldJBBTIK000000000SAMN37683419
H51-bin338_1
GCA_038042825.1ScaffoldJBBTDJ000000000SAMN37683288
H43-bin216_1
GCA_038045685.1ScaffoldJBBSXP000000000SAMN37683138
H51-bin302_1
GCA_038045465.1ScaffoldJBBSYB000000000SAMN37683150
H43-bin179_1
GCA_038041885.1ScaffoldJBBTFL000000000SAMN37683342
H51-bin239_1
GCA_038041125.1ScaffoldJBBTIA000000000SAMN37683409
H51-bin270_1
GCA_038041205.1ScaffoldJBBTHF000000000SAMN37683388
H51-bin182_1
GCA_038060175.1ScaffoldJBBTHX000000000SAMN37683406
H51-bin189_1
GCA_038059995.1ScaffoldJBBTIL000000000SAMN37683420
H43-bin196_1
GCA_038060455.1ScaffoldJBBTHI000000000SAMN37683391
H51-bin298_1
GCA_038059355.1ScaffoldJBBTJR000000000SAMN37683452
H43-bin127_1
GCA_038059005.1ScaffoldJBBTKM000000000SAMN37683473
H51-bin310_1
GCA_038067885.1ScaffoldJBBTNA000000000SAMN37688470
H14-bin055_1
GCA_038060945.1ScaffoldJBBTCL000000000SAMN37683264
H43-bin172_1
GCA_038060515.1ScaffoldJBBTHC000000000SAMN37683385
H41-bin281_1
GCA_038042055.1ScaffoldJBBTEZ000000000SAMN37683330
H52-bin094_1
GCA_038043225.1ScaffoldJBBTCK000000000SAMN37683263
H43-bin215_1
GCA_038059375.1ScaffoldJBBTJQ000000000SAMN37683451
H43-bin154
GCA_038068215.1ScaffoldJBBTML000000000SAMN37688455
H43-bin224_1
GCA_038078975.1ScaffoldJBBTME000000000SAMN37688448
H43-bin178_1
GCA_038068435.1ScaffoldJBBTLZ000000000SAMN37688443
H32-bin110_1
GCA_038060395.1ScaffoldJBBTHM000000000SAMN37683395
H41-bin276
GCA_038060295.1ScaffoldJBBTHR000000000SAMN37683400
H41-bin194_1
GCA_038060115.1ScaffoldJBBTIE000000000SAMN37683413
H32-bin048_1
GCA_038042445.1ScaffoldJBBTED000000000SAMN37683308
H52-bin162_1
GCA_038067695.1ScaffoldJBBTNQ000000000SAMN37688486
H51-bin336_1
GCA_038068975.1ScaffoldJBBTKW000000000SAMN37688414
H51-bin287_1
GCA_038046745.1ScaffoldJBBSVP000000000SAMN37683086
H32-bin130_1
GCA_038041485.1ScaffoldJBBTGH000000000SAMN37683364
H43-bin228_1
GCA_038060315.1ScaffoldJBBTHU000000000SAMN37683403
H14-bin052
GCA_038059735.1ScaffoldJBBTIW000000000SAMN37683431
H32-bin140_1
GCA_038068955.1ScaffoldJBBTKX000000000SAMN37688415
H51-bin208_1
GCA_038067935.1ScaffoldJBBTMZ000000000SAMN37688469
H51-bin266_1
GCA_038068735.1ScaffoldJBBTLJ000000000SAMN37688427
H51-bin261_1
GCA_038068635.1ScaffoldJBBTLP000000000SAMN37688433
H41-bin219
GCA_038068515.1ScaffoldJBBTLU000000000SAMN37688438
H32-bin089_1
GCA_038067195.1ScaffoldJBBTOP000000000SAMN37688511
H43-bin119_1
GCA_038060595.1ScaffoldJBBTGN000000000SAMN37683370
H14-bin046
GCA_038060805.1ScaffoldJBBTDY000000000SAMN37683303
H32-bin121_1
GCA_038066415.1ScaffoldJBBTPA000000000SAMN37688522
H14-bin032_1
GCA_038066295.1ScaffoldJBBTPF000000000SAMN37688527
H32-bin017_2
GCA_038060195.1ScaffoldJBBTIB000000000SAMN37683410
H51-bin296_1
GCA_038060375.1ScaffoldJBBTHN000000000SAMN37683396
H51-bin318_1
GCA_038060355.1ScaffoldJBBTHO000000000SAMN37683397
H51-bin255_1
GCA_038059955.1ScaffoldJBBTIM000000000SAMN37683421
H51-bin200_1
GCA_038058835.1ScaffoldJBBTKV000000000SAMN37683482
H43-bin208_1
GCA_038058975.1ScaffoldJBBTKO000000000SAMN37683475
H43-bin106
GCA_038041375.1ScaffoldJBBTGS000000000SAMN37683375
H14-bin058_1
GCA_038041275.1ScaffoldJBBTGZ000000000SAMN37683382
H43-bin126_1_1
GCA_038042325.1ScaffoldJBBTEL000000000SAMN37683316
H43-bin120_1
GCA_038042805.1ScaffoldJBBTDL000000000SAMN37683290
H43-bin143_1
GCA_038042765.1ScaffoldJBBTDK000000000SAMN37683289
H43-bin195_1
GCA_038046605.1ScaffoldJBBSVW000000000SAMN37683093
H43-bin164_1
GCA_038046765.1ScaffoldJBBSVN000000000SAMN37683084
H52-bin093_1
GCA_038046805.1ScaffoldJBBSVO000000000SAMN37683085
H52-bin163_1
GCA_038046065.1ScaffoldJBBSWX000000000SAMN37683120
H43-bin237_1
GCA_038044185.1ScaffoldJBBTAM000000000SAMN37683213
H41-bin210_1
GCA_038068755.1ScaffoldJBBTLH000000000SAMN37688425
H51-bin162_1
GCA_038068915.1ScaffoldJBBTLB000000000SAMN37688419
H51-bin305_1
GCA_038042745.1ScaffoldJBBTDN000000000SAMN37683292
H51-bin231_1
GCA_038042525.1ScaffoldJBBTEC000000000SAMN37683307
H43-bin222_1
GCA_038042215.1ScaffoldJBBTES000000000SAMN37683323
H51-bin333_1
GCA_038041365.1ScaffoldJBBTGT000000000SAMN37683376
H43-bin203_1
GCA_038041105.1ScaffoldJBBTHZ000000000SAMN37683408
H52-bin157_1
GCA_038060675.1ScaffoldJBBTGI000000000SAMN37683365
H43-bin184_1
GCA_038067575.1ScaffoldJBBTNX000000000SAMN37688493
H51-bin232_1
GCA_038067995.1ScaffoldJBBTMW000000000SAMN37688466
H41-bin161_1
GCA_038067975.1ScaffoldJBBTMV000000000SAMN37688465
H51-bin273_1
GCA_038068295.1ScaffoldJBBTMG000000000SAMN37688450
H52-bin129_1
GCA_038067635.1ScaffoldJBBTNR000000000SAMN37688487
H43-bin107_1
GCA_038068715.1ScaffoldJBBTLK000000000SAMN37688428
H43-bin128
GCA_038068575.1ScaffoldJBBTLS000000000SAMN37688436
H51-bin220_1
GCA_038068555.1ScaffoldJBBTLT000000000SAMN37688437
H14-bin050_1
GCA_038068075.1ScaffoldJBBTMQ000000000SAMN37688460
H51-bin321_1
GCA_038068775.1ScaffoldJBBTLG000000000SAMN37688424
H43-bin111_1
GCA_038079015.1ScaffoldJBBTKY000000000SAMN37688416
H52-bin027_1
GCA_038060695.1ScaffoldJBBTFR000000000SAMN37683348
H51-bin323_1
GCA_038066315.1ScaffoldJBBTPG000000000SAMN37688528
H52-bin102_1
GCA_038066455.1ScaffoldJBBTOY000000000SAMN37688520
H43-bin101_1
GCA_038066435.1ScaffoldJBBTOZ000000000SAMN37688521
H14-bin036_1
GCA_038067135.1ScaffoldJBBTOU000000000SAMN37688516
H51-bin259
GCA_038078875.1ScaffoldJBBTNO000000000SAMN37688484
H51-bin299_1
GCA_038041725.1ScaffoldJBBTFU000000000SAMN37683351
H32-bin086_1
GCA_038041825.1ScaffoldJBBTFP000000000SAMN37683346
H43-bin129_1
GCA_038041975.1ScaffoldJBBTFG000000000SAMN37683337
H43-bin205_1
GCA_038042905.1ScaffoldJBBTDE000000000SAMN37683283
H41-bin260_1
GCA_038043145.1ScaffoldJBBTCQ000000000SAMN37683269
H51-bin274_1_1
GCA_038058875.1ScaffoldJBBTKT000000000SAMN37683480
H14-bin019_1
GCA_038060255.1ScaffoldJBBTHW000000000SAMN37683405
H41-bin235_1
GCA_038060235.1ScaffoldJBBTHV000000000SAMN37683404
H43-bin149
GCA_038060215.1ScaffoldJBBTHY000000000SAMN37683407
H43-bin167_1
GCA_038059495.1ScaffoldJBBTJI000000000SAMN37683443
H14-bin048_1
GCA_038059285.1ScaffoldJBBTJV000000000SAMN37683456
H43-bin198_1
GCA_038059455.1ScaffoldJBBTJK000000000SAMN37683445
H51-bin210_1
GCA_038059435.1ScaffoldJBBTJM000000000SAMN37683447
H41-bin198_1
GCA_038060635.1ScaffoldJBBTGK000000000SAMN37683367
H41-bin165_1
GCA_038068895.1ScaffoldJBBTLA000000000SAMN37688418
H32-bin040
GCA_038068875.1ScaffoldJBBTLC000000000SAMN37688420
H32-bin127_2
GCA_038068255.1ScaffoldJBBTMK000000000SAMN37688454
H32-bin075_1
GCA_038068415.1ScaffoldJBBTMA000000000SAMN37688444
H51-bin100_1
GCA_038068395.1ScaffoldJBBTMB000000000SAMN37688445
H43-bin156
GCA_038067755.1ScaffoldJBBTNL000000000SAMN37688481
H32-bin093_1
GCA_038067255.1ScaffoldJBBTOL000000000SAMN37688507
H41-bin122_1
GCA_038067435.1ScaffoldJBBTOD000000000SAMN37688499
H51-bin285_1
GCA_038066035.1ScaffoldJBBTPT000000000SAMN37688541
H32-bin029
GCA_038066375.1ScaffoldJBBTPD000000000SAMN37688525
H51-bin193_1
GCA_038060095.1ScaffoldJBBTIF000000000SAMN37683414
H52-bin067_1
GCA_038043525.1ScaffoldJBBTBW000000000SAMN37683249
H41-bin279_1
GCA_038043305.1ScaffoldJBBTCG000000000SAMN37683259
H52-bin143_1
GCA_038042015.1ScaffoldJBBTFC000000000SAMN37683333
H14-bin053_1
GCA_038042465.1ScaffoldJBBTEE000000000SAMN37683309
H52-bin013_1
GCA_038041445.1ScaffoldJBBTGO000000000SAMN37683371
H51-bin198_1
GCA_038041305.1ScaffoldJBBTGV000000000SAMN37683378
H32-bin094_1
GCA_038065975.1ScaffoldJBBTPW000000000SAMN37688544
H52-bin121_1
GCA_038060755.1ScaffoldJBBTFD000000000SAMN37683334
H41-bin084_1
GCA_038067155.1ScaffoldJBBTOS000000000SAMN37688514
H41-bin246_1
GCA_038067595.1ScaffoldJBBTNU000000000SAMN37688490
H51-bin194
GCA_038067495.1ScaffoldJBBTOA000000000SAMN37688496
H51-bin293
GCA_038068815.1ScaffoldJBBTLF000000000SAMN37688423
H51-bin276_1
GCA_038078935.1ScaffoldJBBTNG000000000SAMN37688476
H14-bin031
GCA_038041525.1ScaffoldJBBTGF000000000SAMN37683362
H32-bin141_1
GCA_038059855.1ScaffoldJBBTIS000000000SAMN37683427
H41-bin093_1
GCA_038060535.1ScaffoldJBBTHA000000000SAMN37683383
H41-bin160_1
GCA_038059415.1ScaffoldJBBTJN000000000SAMN37683448
H52-bin097_1
GCA_038060775.1ScaffoldJBBTEO000000000SAMN37683319
H41-bin224_1
GCA_038059315.1ScaffoldJBBTJT000000000SAMN37683454
H51-bin165_1
GCA_038043265.1ScaffoldJBBTCI000000000SAMN37683261
H32-bin102_1
GCA_038042035.1ScaffoldJBBTFB000000000SAMN37683332
H41-bin275_1
GCA_038041995.1ScaffoldJBBTFF000000000SAMN37683336
H41-bin213_1
GCA_038042505.1ScaffoldJBBTEF000000000SAMN37683310
H41-bin237_1
GCA_038041805.1ScaffoldJBBTFN000000000SAMN37683344
H51-bin191_1
GCA_038060705.1ScaffoldJBBTFS000000000SAMN37683349
H51-bin008_1
GCA_038060655.1ScaffoldJBBTGJ000000000SAMN37683366
H32-bin109_1
GCA_038066055.1ScaffoldJBBTPR000000000SAMN37688539
H43-bin104_1
GCA_038066335.1ScaffoldJBBTPE000000000SAMN37688526
H41-bin071_1
GCA_038041915.1ScaffoldJBBTFH000000000SAMN37683338
H32-bin139_1
GCA_038043545.1ScaffoldJBBTBS000000000SAMN37683245
H41-bin138_1
GCA_038043505.1ScaffoldJBBTBT000000000SAMN37683246
H43-bin067_1
GCA_038043565.1ScaffoldJBBTBR000000000SAMN37683244
H32-bin037_1
GCA_038043625.1ScaffoldJBBTBQ000000000SAMN37683243
H43-bin048_1
GCA_038043605.1ScaffoldJBBTBP000000000SAMN37683242
H43-bin232
GCA_038043585.1ScaffoldJBBTBO000000000SAMN37683241
H51-bin084_1
GCA_038043765.1ScaffoldJBBTBF000000000SAMN37683232
H43-bin042
GCA_038043645.1ScaffoldJBBTBN000000000SAMN37683240
H52-bin015_1
GCA_038043725.1ScaffoldJBBTBK000000000SAMN37683237
H14-bin021_1
GCA_038043705.1ScaffoldJBBTBL000000000SAMN37683238
H51-bin121
GCA_038043685.1ScaffoldJBBTBJ000000000SAMN37683236
H51-bin057_1
GCA_038043745.1ScaffoldJBBTBI000000000SAMN37683235
H51-bin013
GCA_038043845.1ScaffoldJBBTBD000000000SAMN37683230
H43-bin021_1
GCA_038043825.1ScaffoldJBBTBE000000000SAMN37683231
H32-bin042_1
GCA_038043805.1ScaffoldJBBTBG000000000SAMN37683233
H32-bin084_1
GCA_038043925.1ScaffoldJBBTBA000000000SAMN37683227
H41-bin035_1
GCA_038043905.1ScaffoldJBBTAZ000000000SAMN37683226
H51-bin040_1
GCA_038043885.1ScaffoldJBBTBC000000000SAMN37683229
H14-bin044_1
GCA_038043865.1ScaffoldJBBTBB000000000SAMN37683228
H41-bin110_1
GCA_038046545.1ScaffoldJBBSVZ000000000SAMN37683096
H43-bin159_1
GCA_038046685.1ScaffoldJBBSVT000000000SAMN37683090
H14-bin056_1
GCA_038046485.1ScaffoldJBBSWA000000000SAMN37683097
H51-bin340_1
GCA_038046465.1ScaffoldJBBSWB000000000SAMN37683098
H41-bin204_1
GCA_038046445.1ScaffoldJBBSWE000000000SAMN37683101
H52-bin155_1
GCA_038046425.1ScaffoldJBBSWG000000000SAMN37683103
H51-bin332_1
GCA_038046405.1ScaffoldJBBSWI000000000SAMN37683105
H43-bin028_1
GCA_038046385.1ContigJBBSWH000000000SAMN37683104
H52-bin084_1
GCA_038046365.1ScaffoldJBBSWF000000000SAMN37683102
H52-bin087_1
GCA_038046345.1ScaffoldJBBSWJ000000000SAMN37683106
H51-bin140_1
GCA_038046325.1ScaffoldJBBSWK000000000SAMN37683107
H51-bin025_1
GCA_038046295.1ScaffoldJBBSWM000000000SAMN37683109
H51-bin113_1
GCA_038045045.1ScaffoldJBBSYW000000000SAMN37683171
H41-bin240_1
GCA_038045025.1ScaffoldJBBSYX000000000SAMN37683172
H14-bin006
GCA_038044965.1ScaffoldJBBSZB000000000SAMN37683176
H51-bin106_1
GCA_038045005.1ScaffoldJBBSYZ000000000SAMN37683174
H32-bin054_1
GCA_038044985.1ScaffoldJBBSYY000000000SAMN37683173
H51-bin036_1
GCA_038045525.1ScaffoldJBBSXY000000000SAMN37683147
H32-bin010
GCA_038045505.1ScaffoldJBBSXZ000000000SAMN37683148
H51-bin020_1
GCA_038045485.1ScaffoldJBBSYA000000000SAMN37683149
H43-bin036_1
GCA_038045105.1ScaffoldJBBSYU000000000SAMN37683169
H43-bin046_1
GCA_038045085.1ScaffoldJBBSYT000000000SAMN37683168
H51-bin127_1
GCA_038045445.1ContigJBBSYC000000000SAMN37683151
H51-bin075_1
GCA_038045425.1ScaffoldJBBSYD000000000SAMN37683152
H43-bin227_1
GCA_038045405.1ScaffoldJBBSYF000000000SAMN37683154
H52-bin004_1
GCA_038045385.1ScaffoldJBBSYE000000000SAMN37683153
H41-bin053_1
GCA_038045365.1ScaffoldJBBSYH000000000SAMN37683156
H51-bin114_1
GCA_038045345.1ScaffoldJBBSYG000000000SAMN37683155
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H32-bin143_1

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