cultivated from goat feces or anaerobic digester s... (ID 1023249) - BioProject

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Accession: PRJNA1023249 ID: 1023249

cultivated from goat feces or anaerobic digester sludge

cultivated microbial species from anaerobic digester sludge and goat feces

Anaerobic microbial communities were cultivated from anaerobic digester sludge and goat feces. More...

Accession	PRJNA1023249
Data Type	Genome sequencing
Scope	Multispecies
Publications	Blair EM et al., "Metagenomics analysis yields assembled genomes from prokaryotic anaerobes with polymer-degrading potential.", Biotechnol Prog, 2024 Nov-Dec;40(6):e3484
Submission	Registration date: 2-Oct-2023 University of California, Santa Barbara
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	72
SRA Experiments	24
Publications
PubMed	1
PMC	1
Other datasets
BioSample	75
Assembly	72

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

72
72

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_040307185.1	JAWRKB000000000	SAMN37796652	ADS24	Acetoanaerobium noterae
GCA_040307535.1	JAWRJH000000000	SAMN37796643	ADS19	Acholeplasmataceae bacterium
GCA_040307275.1	JAWRJV000000000	SAMN37796790	RFS15	Actinomycetaceae bacterium
GCA_040307225.1	JAWRJZ000000000	SAMN37796650	ADS17	Aminobacterium colombiense
GCA_040268365.1	JAWRIN000000000	SAMN37796771	RFS12	Aminobacterium mobile
GCA_040307685.1	JAWRJA000000000	SAMN37796778	RFS13	Aminobacterium sp.
GCA_040308035.1	JAWRIC000000000	SAMN37796630	ADS16	Aminomonas paucivorans
GCA_040306945.1	JAWRKM000000000	SAMN37796662	ADS3	Anaerohalosphaeraceae bacterium
GCA_040307045.1	JAWRKF000000000	SAMN37796656	ADS28	Anaerotignum sp.
GCA_040308005.1	JAWRIG000000000	SAMN37796767	RFS23	Anaerovoracaceae bacterium
GCA_040307645.1	JAWRJF000000000	SAMN37796641	ADS23	Anaerovoracaceae bacterium
GCA_040307385.1	JAWRJQ000000000	SAMN37796787	RFS17	Atopobiaceae bacterium
GCA_040268355.1	JAWRIT000000000	SAMN37796774	RFS18	Atopobiaceae bacterium
GCA_040307985.1	JAWRID000000000	SAMN37796758	RFSC1	Bacilli bacterium
GCA_040306955.1	JAWRKL000000000	SAMN37796661	ADS20	Bacillota bacterium
GCA_040307125.1	JAWRKE000000000	SAMN37796655	ADS5	Bacteroidales bacterium
GCA_040307445.1	JAWRJL000000000	SAMN37796784	RFS3	Bacteroidales bacterium
GCA_040268545.1	JAWRIE000000000	SAMN37796765	RFS4	Bacteroidales bacterium
GCA_040268385.1	JAWRIM000000000	SAMN37796633	ADS6	Bacteroides uniformis
GCA_040307815.1	JAWRIV000000000	SAMN37796638	ADS14	Candidatus Cloacimonadota bacterium
GCA_040268455.1	JAWRIH000000000	SAMN37796768	RFS32	Clostridia bacterium
GCA_040307065.1	JAWRKH000000000	SAMN37796658	ADS33	Clostridia bacterium
GCA_040307375.1	JAWRJS000000000	SAMN37796788	RFS33	Clostridia bacterium
GCA_040307835.1	JAWRIU000000000	SAMN37796637	ADS22	Clostridiaceae bacterium
GCA_040307715.1	JAWRJC000000000	SAMN37796779	RFS24	Clostridiales bacterium
GCA_040267415.1	JAWRHY000000000	SAMN37796628	ADS27	Clostridium paraputrificum
GCA_040307285.1	JAWRJX000000000	SAMN37796792	RFS26	Clostridium sp.
GCA_040307505.1	JAWRJN000000000	SAMN37796785	RFS28	Clostridium sulfidigenes
GCA_040307245.1	JAWRJY000000000	SAMN37796649	ADS26	Clostridium tertium
GCA_040307735.1	JAWRJB000000000	SAMN37796640	ADS10	Deltaproteobacteria bacterium
GCA_040307455.1	JAWRJO000000000	SAMN37796646	ADS13	Desulfovibrio aminophilus
GCA_040307135.1	JAWRKD000000000	SAMN37796654	ADS12	Desulfovibrionaceae bacterium
GCA_040307025.1	JAWRKJ000000000	SAMN37796660	ADS11	Desulfovibrionaceae bacterium
GCA_040307575.1	JAWRJG000000000	SAMN37796642	ADS8	Dysgonamonadaceae bacterium
GCA_040307795.1	JAWRIW000000000	SAMN37796775	RFS30	Enterocloster aldenensis
GCA_040307595.1	JAWRJJ000000000	SAMN37796644	ADS30	Enterocloster asparagiformis
GCA_040306965.1	JAWRKN000000000	SAMN37796663	ADS31	Enterocloster citroniae
GCA_040307325.1	JAWRJU000000000	SAMN37796789	RFS31	Enterocloster clostridioformis
GCA_040307935.1	JAWRIK000000000	SAMN37796770	RFS20	Enterococcus hirae
GCA_040307885.1	JAWRIP000000000	SAMN37796635	ADS18	Enterococcus lactis
GCA_040266995.1	JAWRHV000000000	SAMN37796760	RFS22	Erysipelotrichaceae bacterium
GCA_040308095.1	JAWRHW000000000	SAMN37796761	RFS8	Escherichia coli
GCA_040268535.1	JAWRIB000000000	SAMN37796764	RFS35	Flavonifractor plautii
GCA_040307465.1	JAWRJM000000000	SAMN37796645	ADS32	Hydrogenoanaerobacterium saccharovorans
GCA_040308105.1	JAWRHX000000000	SAMN37796762	RFS21	Kandleria vitulina
GCA_040307775.1	JAWRIY000000000	SAMN37796639	ADS36	Lawsonibacter hominis
GCA_040268475.1	JAWRII000000000	SAMN37796631	ADS7	Macellibacteroides fermentans
GCA_040307175.1	JAWRKA000000000	SAMN37796651	ADS2	Methanococcoides sp.
GCA_040307525.1	JAWRJK000000000	SAMN37796783	RFS2	Methanomicrobium mobile
GCA_040268605.1	JAWRIF000000000	SAMN37796766	RFS9	Nitratidesulfovibrio vulgaris
GCA_040307925.1	JAWRIL000000000	SAMN37796632	ADS34	Oscillibacter ruminantium
GCA_040307975.1	JAWRIJ000000000	SAMN37796769	RFS34	Oscillospiraceae bacterium
GCA_040307425.1	JAWRJP000000000	SAMN37796786	RFS5	Parabacteroides merdae
GCA_040268395.1	JAWRIZ000000000	SAMN37796777	RFS25	Paraclostridium dentum
GCA_040307355.1	JAWRJR000000000	SAMN37796647	ADS9	Petrimonas sp.
GCA_040307875.1	JAWRIQ000000000	SAMN37796772	RFS19	Petrotoga sp.
GCA_040307615.1	JAWRJE000000000	SAMN37796781	RFS14	Propionibacterium ruminifibrarum
GCA_040308045.1	JAWRHZ000000000	SAMN37796629	ADS25	Proteiniborus sp.
GCA_040307265.1	JAWRJW000000000	SAMN37796791	RFS7	Proteiniphilum acetatigenes
GCA_040307845.1	JAWRIS000000000	SAMN37796773	RFS6	Proteiniphilum sp.
GCA_040307055.1	JAWRKI000000000	SAMN37796659	ADS35	Pseudoflavonifractor sp.
GCA_040307345.1	JAWRJT000000000	SAMN37796648	ADS15	Pyramidobacter piscolens
GCA_040306995.1	JAWRKK000000000	SAMN37796793	RFS10	Pyramidobacter sp.
GCA_040268595.1	JAWRIA000000000	SAMN37796763	RFS16	Slackia heliotrinireducens
GCA_040307075.1	JAWRKG000000000	SAMN37796657	ADS4	Sphaerochaeta sp.
GCA_040307565.1	JAWRJI000000000	SAMN37796782	RFS27	Sporanaerobacter acetigenes
GCA_040307745.1	JAWRIX000000000	SAMN37796776	RFS11	Synergistes jonesii
GCA_040307165.1	JAWRKC000000000	SAMN37796653	ADS21	Tepidanaerobacter sp.
GCA_040307665.1	JAWRJD000000000	SAMN37796780	RFS1	Thermoplasmata archaeon
GCA_040268405.1	JAWRIR000000000	SAMN37796636	ADS1	Thermoproteota archaeon
GCA_040308065.1	JAWRHU000000000	SAMN37796759	RFS29	[Clostridium] aminophilum
GCA_040307915.1	JAWRIO000000000	SAMN37796634	ADS29	[Clostridium] symbiosum

SRA Data Details

Parameter	Value
Data volume, Gbases	40
Data volume, Mbytes	16992

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cultivated from goat feces or anaerobic digester sludge

cultivated microbial species from anaerobic digester sludge and goat feces

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