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Accession: PRJNA1039280 ID: 1039280

Human microbiota BASEHIT

We developed BASEHIT (Bacterial Selection to Elucidate Host-microbe Interactions in high Throughput), a high-throughput technology to screen intact microbial cells for the ability to bind human proteins displayed on the surface of yeast. More...
AccessionPRJNA1039280
Data TypeGenome sequencing and assembly
ScopeMultispecies
PublicationsSonnert ND et al., "A host-microbiota interactome reveals extensive transkingdom connectivity.", Nature, 2024 Apr;628(8006):171-179
SubmissionRegistration date: 11-Nov-2023
Yale University
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)166
SRA Experiments610
Publications
PubMed1
Other datasets
BioSample779
Assembly166
Assembly details:
Assembly levelNumber of Assemblies
165
1
166
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_037784355.1ScaffoldJBBLOF000000000SAMN39542570
JONWP012
GCA_037784285.1ScaffoldJBBLOG000000000SAMN39542571
JONWP013
GCA_037699485.1ScaffoldJBBLOJ000000000SAMN39542574
JONWP016
GCA_037699645.1ScaffoldJBBLOD000000000SAMN39542568
JONWP010
GCA_037699545.1ScaffoldJBBLOH000000000SAMN39542572
JONWP014
GCA_037699585.1ScaffoldJBBLOE000000000SAMN39542569
JONWP011
GCA_037699705.1ScaffoldJBBLNZ000000000SAMN39542564
JONWP006
GCA_037699685.1ScaffoldJBBLOB000000000SAMN39542566
JONWP008
GCA_037699775.1ScaffoldJBBLOC000000000SAMN39542567
JONWP009
GCA_037699905.1ScaffoldJBBLNW000000000SAMN39542561
JONWP003
GCA_037699885.1ScaffoldJBBLNX000000000SAMN39542562
JONWP004
GCA_037699985.1ScaffoldJBBLNU000000000SAMN39542559
JONWP001
GCA_037699925.1ScaffoldJBBLNV000000000SAMN39542560
JONWP002
GCA_037699165.1ScaffoldJBBLOQ000000000SAMN39542581
JONWP023
GCA_037699305.1ScaffoldJBBLOO000000000SAMN39542579
JONWP021
GCA_037699285.1ScaffoldJBBLON000000000SAMN39542578
JONWP020
GCA_037699345.1ScaffoldJBBLOM000000000SAMN39542577
JONWP019
GCA_037699225.1ScaffoldJBBLOP000000000SAMN39542580
JONWP022
GCA_037695275.1ScaffoldJBBLSE000000000SAMN39542674
JONWP115
GCA_037695515.1ScaffoldJBBLRZ000000000SAMN39542669
JONWP110
GCA_037696955.1ScaffoldJBBLQT000000000SAMN39542636
JONWP078
GCA_037697805.1ScaffoldJBBLPZ000000000SAMN39542616
JONWP058
GCA_037698665.1ScaffoldJBBLPB000000000SAMN39542592
JONWP034
GCA_037697725.1ScaffoldJBBLQA000000000SAMN39542617
JONWP059
GCA_037697625.1ScaffoldJBBLQD000000000SAMN39542620
JONWP062
GCA_037697685.1ScaffoldJBBLQB000000000SAMN39542618
JONWP060
GCA_037697695.1ScaffoldJBBLQC000000000SAMN39542619
JONWP061
GCA_037697355.1ScaffoldJBBLQK000000000SAMN39542627
JONWP069
GCA_037697415.1ScaffoldJBBLQI000000000SAMN39542625
JONWP067
GCA_037697525.1ScaffoldJBBLQE000000000SAMN39542621
JONWP063
GCA_037697495.1ScaffoldJBBLQH000000000SAMN39542624
JONWP066
GCA_037697475.1ScaffoldJBBLQG000000000SAMN39542623
JONWP065
GCA_037697565.1ScaffoldJBBLQF000000000SAMN39542622
JONWP064
GCA_037697895.1ScaffoldJBBLPX000000000SAMN39542614
JONWP056
GCA_037697865.1ScaffoldJBBLPY000000000SAMN39542615
JONWP057
GCA_037697845.1ScaffoldJBBLPW000000000SAMN39542613
JONWP055
GCA_037697945.1ScaffoldJBBLPV000000000SAMN39542612
JONWP054
GCA_037698065.1ScaffoldJBBLPT000000000SAMN39542610
JONWP052
GCA_037698045.1ScaffoldJBBLPS000000000SAMN39542609
JONWP051
GCA_037698145.1ScaffoldJBBLPQ000000000SAMN39542607
JONWP049
GCA_037698115.1ScaffoldJBBLPR000000000SAMN39542608
JONWP050
GCA_037698105.1ScaffoldJBBLPU000000000SAMN39542611
JONWP053
GCA_037698245.1ScaffoldJBBLPN000000000SAMN39542604
JONWP046
GCA_037698225.1ContigJBBLPP000000000SAMN39542606
JONWP048
GCA_037698405.1ScaffoldJBBLPK000000000SAMN39542601
JONWP043
GCA_037696995.1ScaffoldJBBLQS000000000SAMN39542635
JONWP077
GCA_037696755.1ScaffoldJBBLQY000000000SAMN39542641
JONWP083
GCA_037696795.1ScaffoldJBBLQX000000000SAMN39542640
JONWP082
GCA_037696875.1ScaffoldJBBLQV000000000SAMN39542638
JONWP080
GCA_037696855.1ScaffoldJBBLQW000000000SAMN39542639
JONWP081
GCA_037696835.1ScaffoldJBBLQU000000000SAMN39542637
JONWP079
GCA_037697055.1ScaffoldJBBLQR000000000SAMN39542634
JONWP076
GCA_037697035.1ScaffoldJBBLQQ000000000SAMN39542633
JONWP075
GCA_037697115.1ScaffoldJBBLQP000000000SAMN39542632
JONWP074
GCA_037697155.1ScaffoldJBBLQO000000000SAMN39542631
JONWP073
GCA_037697195.1ScaffoldJBBLQM000000000SAMN39542629
JONWP071
GCA_037697235.1ScaffoldJBBLQN000000000SAMN39542630
JONWP072
GCA_037697275.1ScaffoldJBBLQL000000000SAMN39542628
JONWP070
GCA_037697315.1ScaffoldJBBLQJ000000000SAMN39542626
JONWP068
GCA_037696275.1ScaffoldJBBLRL000000000SAMN39542655
JONWP096
GCA_037696255.1ScaffoldJBBLRK000000000SAMN39542654
JONWP095
GCA_037696235.1ScaffoldJBBLRJ000000000SAMN39542653
JONWP094
GCA_037696395.1ScaffoldJBBLRH000000000SAMN39542651
JONWP092
GCA_037696595.1ScaffoldJBBLRC000000000SAMN39542645
JONWP087
GCA_037696575.1ScaffoldJBBLRD000000000SAMN39542646
JONWP088
GCA_037696455.1ScaffoldJBBLRE000000000SAMN39542647
JONWP089
GCA_037696475.1ScaffoldJBBLRF000000000SAMN39542649
JONWP090
GCA_037696435.1ScaffoldJBBLRG000000000SAMN39542650
JONWP091
GCA_037696655.1ScaffoldJBBLQZ000000000SAMN39542642
JONWP084
GCA_037696675.1ScaffoldJBBLRA000000000SAMN39542643
JONWP085
GCA_037696635.1ScaffoldJBBLRB000000000SAMN39542644
JONWP086
GCA_037695615.1ScaffoldJBBLRY000000000SAMN39542668
JONWP109
GCA_037695655.1ScaffoldJBBLRX000000000SAMN39542667
JONWP108
GCA_037695695.1ScaffoldJBBLRW000000000SAMN39542666
JONWP107
GCA_037695775.1ScaffoldJBBLRV000000000SAMN39542665
JONWP106
GCA_037695885.1ScaffoldJBBLRS000000000SAMN39542662
JONWP103
GCA_037695865.1ScaffoldJBBLRT000000000SAMN39542663
JONWP104
GCA_037695845.1ScaffoldJBBLRU000000000SAMN39542664
JONWP105
GCA_037696075.1ScaffoldJBBLRP000000000SAMN39542659
JONWP100
GCA_037696055.1ScaffoldJBBLRO000000000SAMN39542658
JONWP099
GCA_037696035.1ScaffoldJBBLRR000000000SAMN39542661
JONWP102
GCA_037696015.1ScaffoldJBBLRQ000000000SAMN39542660
JONWP101
GCA_037696135.1ScaffoldJBBLRN000000000SAMN39542657
JONWP098
GCA_037696195.1ScaffoldJBBLRM000000000SAMN39542656
JONWP097
GCA_037696335.1ScaffoldJBBLRI000000000SAMN39542652
JONWP093
GCA_037694235.1ScaffoldJBBLTA000000000SAMN39542711
JONWP152
GCA_037699105.1ScaffoldJBBLOS000000000SAMN39542583
JONWP025
GCA_037699085.1ScaffoldJBBLOT000000000SAMN39542584
JONWP026
GCA_037698925.1ScaffoldJBBLOW000000000SAMN39542587
JONWP029
GCA_037698905.1ScaffoldJBBLOY000000000SAMN39542589
JONWP031
GCA_037698885.1ScaffoldJBBLOZ000000000SAMN39542590
JONWP032
GCA_037698945.1ScaffoldJBBLOV000000000SAMN39542586
JONWP028
GCA_037699445.1ScaffoldJBBLOK000000000SAMN39542575
JONWP017
GCA_037699365.1ScaffoldJBBLOL000000000SAMN39542576
JONWP018
GCA_037698325.1ScaffoldJBBLPL000000000SAMN39542602
JONWP044
GCA_037698295.1ScaffoldJBBLPM000000000SAMN39542603
JONWP045
GCA_037698285.1ScaffoldJBBLPO000000000SAMN39542605
JONWP047
GCA_037698525.1ScaffoldJBBLPG000000000SAMN39542597
JONWP039
GCA_037698495.1ScaffoldJBBLPI000000000SAMN39542599
JONWP041
GCA_037698485.1ScaffoldJBBLPH000000000SAMN39542598
JONWP040
GCA_037698465.1ScaffoldJBBLPJ000000000SAMN39542600
JONWP042
GCA_037698585.1ScaffoldJBBLPF000000000SAMN39542596
JONWP038
GCA_037698725.1ScaffoldJBBLPA000000000SAMN39542591
JONWP033
GCA_037698705.1ScaffoldJBBLPD000000000SAMN39542594
JONWP036
GCA_037698685.1ScaffoldJBBLPC000000000SAMN39542593
JONWP035
GCA_037698745.1ScaffoldJBBLPE000000000SAMN39542595
JONWP037
GCA_037698845.1ScaffoldJBBLOX000000000SAMN39542588
JONWP030
GCA_037699045.1ScaffoldJBBLOU000000000SAMN39542585
JONWP027
GCA_037700335.1ScaffoldJBBLUA000000000SAMN39542683
JONWP124
GCA_037693745.1ScaffoldJBBLSO000000000SAMN39542723
JONWP164
GCA_037699525.1ScaffoldJBBLOI000000000SAMN39542573
JONWP015
GCA_037695445.1ScaffoldJBBLSB000000000SAMN39542671
JONWP112
GCA_037695195.1ScaffoldJBBLSF000000000SAMN39542675
JONWP116
GCA_037695345.1ScaffoldJBBLSC000000000SAMN39542672
JONWP113
GCA_037695335.1ScaffoldJBBLSD000000000SAMN39542673
JONWP114
GCA_037695175.1ScaffoldJBBLSG000000000SAMN39542676
JONWP117
GCA_037695095.1ScaffoldJBBLSH000000000SAMN39542677
JONWP118
GCA_037694985.1ScaffoldJBBLSJ000000000SAMN39542679
JONWP120
GCA_037700315.1ScaffoldJBBLTZ000000000SAMN39542684
JONWP125
GCA_037700295.1ScaffoldJBBLTY000000000SAMN39542685
JONWP126
GCA_037700235.1ScaffoldJBBLTW000000000SAMN39542687
JONWP128
GCA_037700455.1ScaffoldJBBLUC000000000SAMN39542681
JONWP122
GCA_037700375.1ScaffoldJBBLUB000000000SAMN39542682
JONWP123
GCA_037700155.1ScaffoldJBBLTX000000000SAMN39542686
JONWP127
GCA_037700135.1ScaffoldJBBLTV000000000SAMN39542688
JONWP129
GCA_037700495.1ScaffoldJBBLUD000000000SAMN39542680
JONWP121
GCA_037700105.1ScaffoldJBBLTU000000000SAMN39542689
JONWP130
GCA_037700085.1ScaffoldJBBLTT000000000SAMN39542690
JONWP131
GCA_037700005.1ScaffoldJBBLTS000000000SAMN39542691
JONWP132
GCA_037694975.1ScaffoldJBBLTQ000000000SAMN39542693
JONWP134
GCA_037694565.1ScaffoldJBBLTI000000000SAMN39542702
JONWP143
GCA_037695005.1ScaffoldJBBLTR000000000SAMN39542692
JONWP133
GCA_037694685.1ScaffoldJBBLTK000000000SAMN39542700
JONWP141
GCA_037694705.1ScaffoldJBBLTL000000000SAMN39542699
JONWP140
GCA_037694695.1ScaffoldJBBLTM000000000SAMN39542698
JONWP139
GCA_037694785.1ScaffoldJBBLTO000000000SAMN39542696
JONWP137
GCA_037694885.1ScaffoldJBBLTP000000000SAMN39542694
JONWP135
GCA_037694845.1ScaffoldJBBLTN000000000SAMN39542697
JONWP138
GCA_037694625.1ScaffoldJBBLTJ000000000SAMN39542701
JONWP142
GCA_037694485.1ScaffoldJBBLTH000000000SAMN39542704
JONWP145
GCA_037694475.1ScaffoldJBBLTF000000000SAMN39542706
JONWP147
GCA_037694465.1ScaffoldJBBLTG000000000SAMN39542705
JONWP146
GCA_037694305.1ScaffoldJBBLTC000000000SAMN39542709
JONWP150
GCA_037694385.1ScaffoldJBBLTD000000000SAMN39542708
JONWP149
GCA_037694425.1ScaffoldJBBLTE000000000SAMN39542707
JONWP148
GCA_037695495.1ScaffoldJBBLSA000000000SAMN39542670
JONWP111
GCA_037694245.1ScaffoldJBBLTB000000000SAMN39542710
JONWP151
GCA_037699125.1ScaffoldJBBLOR000000000SAMN39542582
JONWP024
GCA_037699725.1ScaffoldJBBLOA000000000SAMN39542565
JONWP007
GCA_037699825.1ScaffoldJBBLNY000000000SAMN39542563
JONWP005
GCA_037693945.1ScaffoldJBBLST000000000SAMN39542718
JONWP159
GCA_037694045.1ScaffoldJBBLSX000000000SAMN39542714
JONWP155
GCA_037694015.1ScaffoldJBBLSU000000000SAMN39542717
JONWP158
GCA_037694005.1ScaffoldJBBLSV000000000SAMN39542716
JONWP157
GCA_037694085.1ScaffoldJBBLSW000000000SAMN39542715
JONWP156
GCA_037694095.1ScaffoldJBBLSY000000000SAMN39542713
JONWP154
GCA_037694225.1ScaffoldJBBLSZ000000000SAMN39542712
JONWP153
GCA_037694995.1ScaffoldJBBLSI000000000SAMN39542678
JONWP119
GCA_037693825.1ScaffoldJBBLSR000000000SAMN39542720
JONWP161
GCA_037693535.1ScaffoldJBBLSN000000000SAMN39542724
JONWP165
GCA_037693565.1ScaffoldJBBLSL000000000SAMN39542726
JONWP167
GCA_037693605.1ScaffoldJBBLSM000000000SAMN39542725
JONWP166
GCA_037693765.1ScaffoldJBBLSQ000000000SAMN39542721
JONWP162
GCA_037693755.1ScaffoldJBBLSP000000000SAMN39542722
JONWP163
GCA_037693855.1ScaffoldJBBLSS000000000SAMN39542719
JONWP160
GCA_037693595.1ScaffoldJBBLSK000000000SAMN39542727
JONWP168
SRA Data Details
ParameterValue
Data volume, Gbases925
Data volume, Tbytes0.28

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