U.S. flag

An official website of the United States government

Display Settings:

Format

Send to:

Choose Destination

Links from BioSample

Accession: PRJNA1010110 ID: 1010110

Lucinid clam gills containig DNA of host and bacterial symbionts

Lucinid clam gills containig DNA of host and bacterial symbionts Genome sequencing and assembly

Collection of metagenomes and assembled bacterial MAGs obtained from the gills of shallow water lucinid clams for comparative genomics.
AccessionPRJNA1010110
Data TypeGenome sequencing
ScopeEnvironment
Organismmollusc metagenome[Taxonomy ID: 1417798]
unclassified sequences; metagenomes; organismal metagenomes; mollusc metagenome
Publications
  • Published online: Morel-Letelier I et al., "Adaptations to nitrogen availability drive ecological divergence of chemosynthetic symbionts", PLOS Genetics, 2024;20(5)
SubmissionRegistration date: 29-Aug-2023
Max Planck Institute for Marine Microbiology
Related Resources
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)180
SRA Experiments138
Other datasets
BioSample318
Assembly180
Assembly details:
Assembly levelNumber of Assemblies
177
3
180
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_040791045.1ScaffoldJBFNPB000000000SAMN40439235
PhacGal39_SYM1
GCA_040791025.1ScaffoldJBFNPC000000000SAMN40439236
PhacGal40_SYM1
GCA_040790995.1ScaffoldJBFNPE000000000SAMN40439238
PhacGuadelPhPec1_SYM1
GCA_040790985.1ScaffoldJBFNPH000000000SAMN40439241
2PP1_SYM1
GCA_040790965.1ScaffoldJBFNPD000000000SAMN40439237
PhacGuadel1PP2_SYM1
GCA_040790945.1ScaffoldJBFNPF000000000SAMN40439239
PhacGuadelPhPec3_SYM1
GCA_040790925.1ScaffoldJBFNPG000000000SAMN40439240
PhacGuadelPhPec4_SYM1
GCA_040792715.1ScaffoldJBFNLV000000000SAMN40439151
cteimcahuit009_SYM1
GCA_040792425.1ScaffoldJBFNMJ000000000SAMN40439166
cteimcahuit017_SYM2
GCA_040792105.1ScaffoldJBFNNA000000000SAMN40439185
ctemesantah005_SYM1
GCA_040792135.1ScaffoldJBFNMZ000000000SAMN40439183
ctemesantah003_SYM1
GCA_040792085.1ScaffoldJBFNNB000000000SAMN40439186
ctemesantah007_SYM1
GCA_040792065.1ScaffoldJBFNNC000000000SAMN40439187
ctemesantah008_SYM1
GCA_040792045.1ScaffoldJBFNND000000000SAMN40439188
ctemesantah010_SYM1
GCA_040792025.1ScaffoldJBFNNF000000000SAMN40439190
ctemesantah012_SYM1
GCA_040792005.1ScaffoldJBFNNE000000000SAMN40439189
ctemesantah011_SYM1
GCA_040791945.1ScaffoldJBFNNH000000000SAMN40439192
ctemesantah014_SYM1
GCA_040791955.1ScaffoldJBFNNK000000000SAMN40439195
ctemesantah018_SYM1
GCA_040791965.1ScaffoldJBFNNI000000000SAMN40439193
ctemesantah015_SYM1
GCA_040791925.1ScaffoldJBFNNG000000000SAMN40439191
ctemesantah013_SYM1
GCA_040791905.1ScaffoldJBFNNJ000000000SAMN40439194
ctemesantah016_SYM1
GCA_040791885.1ScaffoldJBFNNL000000000SAMN40439196
ctemesantah019_SYM1
GCA_040791865.1ScaffoldJBFNNP000000000SAMN40439200
ctemesantah030_SYM1
GCA_040791845.1ScaffoldJBFNNM000000000SAMN40439197
ctemesantah020_SYM1
GCA_040791825.1ScaffoldJBFNNO000000000SAMN40439199
ctemesantah028_SYM1
GCA_040791805.1ScaffoldJBFNNN000000000SAMN40439198
ctemesantah027_SYM1
GCA_040791785.1ScaffoldJBFNNQ000000000SAMN40439201
ctemesantah033_SYM1
GCA_040791735.1ScaffoldJBFNNR000000000SAMN40439202
ctemesantah034_SYM1
GCA_040791755.1ScaffoldJBFNNS000000000SAMN40439203
ctemesantah035_SYM1
GCA_040791725.1ScaffoldJBFNNU000000000SAMN40439205
ctemesantah037_SYM1
GCA_040791705.1ScaffoldJBFNNT000000000SAMN40439204
ctemesantah036_SYM1
GCA_040792865.1ScaffoldJBFNLN000000000SAMN40439143
TimeNewSpPV16_SYM2
GCA_040792205.1ScaffoldJBFNMX000000000SAMN40439181
ctegasantah001_SYM1
GCA_040792125.1ScaffoldJBFNMY000000000SAMN40439182
ctegasantah002_SYM1
GCA_040792185.1ScaffoldJBFNMV000000000SAMN40439179
unknocarene033_SYM1
GCA_040791565.1ScaffoldJBFNOB000000000SAMN40439212
ctemesantah044_SYM1
GCA_040791525.1ScaffoldJBFNOC000000000SAMN40439213
ctemesantah045_SYM1
GCA_040791505.1ScaffoldJBFNOE000000000SAMN40439215
ctemesantah047_SYM1
GCA_040791485.1ScaffoldJBFNOH000000000SAMN40439218
ctemesantah050_SYM1
GCA_040791465.1ScaffoldJBFNOF000000000SAMN40439216
ctemesantah048_SYM1
GCA_040791445.1ScaffoldJBFNOG000000000SAMN40439217
ctemesantah049_SYM1
GCA_040791425.1ScaffoldJBFNOI000000000SAMN40439219
ctemesantah051_SYM1
GCA_040791685.1ScaffoldJBFNNV000000000SAMN40439206
ctemesantah038_SYM1
GCA_040791645.1ScaffoldJBFNNZ000000000SAMN40439210
ctemesantah042_SYM1
GCA_040791625.1ScaffoldJBFNNW000000000SAMN40439207
ctemesantah039_SYM1
GCA_040791605.1ScaffoldJBFNNY000000000SAMN40439209
ctemesantah041_SYM1
GCA_040791585.1ScaffoldJBFNOA000000000SAMN40439211
ctemesantah043_SYM1
GCA_040791225.1ScaffoldJBFNOR000000000SAMN40439228
ctemesantah046_SYM2
GCA_040791145.1ContigJBFNOV000000000SAMN40439184
ctemesantah004_SYM1
GCA_040791125.1ScaffoldJBFNPA000000000SAMN40439234
cteimguadel004_SYM3
GCA_040791105.1ScaffoldJBFNOY000000000SAMN40439232
cteimguadel002_SYM2
GCA_040791265.1ScaffoldJBFNOQ000000000SAMN40439227
ctemesantah040_SYM2
GCA_040791065.1ScaffoldJBFNOZ000000000SAMN40439233
cteimguadel003_SYM1
GCA_040793355.1ScaffoldJBFNKP000000000SAMN40439119
CteimGalet28_SYM2
GCA_040793295.1ScaffoldJBFNKT000000000SAMN40439123
cteimguadel004_SYM1
GCA_040793285.1ScaffoldJBFNKS000000000SAMN40439122
cteimguadel002_SYM1
GCA_040793555.1ScaffoldJBFNKD000000000SAMN40439106
cteimstrist091_SYM1
GCA_040793105.1ScaffoldJBFNLB000000000SAMN40439131
TimeNewSpPV17_SYM1
GCA_040793185.1ScaffoldJBFNKW000000000SAMN40439126
cteimguadel010_SYM1
GCA_040793225.1ScaffoldJBFNKY000000000SAMN40439128
cteimguadel008_SYM2
GCA_040792965.1ScaffoldJBFNLI000000000SAMN40439138
TimeNewSpPV18_SYM1
GCA_040792855.1ScaffoldJBFNLP000000000SAMN40439145
TimeNewSpPV19_SYM2
GCA_040794385.1ScaffoldJBFNIQ000000000SAMN40439067
codorcahuit006_SYM2
GCA_040794305.1ScaffoldJBFNIV000000000SAMN40439072
codorguadel002_SYM1
GCA_040794285.1ScaffoldJBFNIU000000000SAMN40439071
codorguadel001_SYM1
GCA_040794265.1ScaffoldJBFNIW000000000SAMN40439073
codorguadel003_SYM1
GCA_040794245.1ScaffoldJBFNIX000000000SAMN40439074
codorguadel004_SYM1
GCA_040794205.1ScaffoldJBFNIZ000000000SAMN40439076
codorstmartm02run1_SYM1
GCA_040794165.1ScaffoldJBFNJA000000000SAMN40439077
codorstrist081run1_SYM1
GCA_040794185.1ScaffoldJBFNJB000000000SAMN40439078
codorguadel001_SYM2
GCA_040794145.1ScaffoldJBFNJC000000000SAMN40439079
codorguadel002_SYM2
GCA_040794085.1ScaffoldJBFNJH000000000SAMN40439084
ctebehawaiim15_SYM1
GCA_040794095.1ScaffoldJBFNJD000000000SAMN40439080
codorguadel003_SYM2
GCA_040794065.1ScaffoldJBFNJF000000000SAMN40439082
codorguadel005_SYM2
GCA_040794045.1ScaffoldJBFNJE000000000SAMN40439081
codorguadel004_SYM2
GCA_040793955.1ScaffoldJBFNJJ000000000SAMN40439086
ctebehawaiim23_SYM1
GCA_040793945.1ScaffoldJBFNJL000000000SAMN40439088
ctebehawaiim37_SYM1
GCA_040793975.1ScaffoldJBFNJK000000000SAMN40439087
ctebehawaiim35_SYM1
GCA_040794525.1ScaffoldJBFNIM000000000SAMN40439063
coddisantah006_SYM1
GCA_040794505.1ScaffoldJBFNIK000000000SAMN40439061
coddibajacam12rep_SYM1
GCA_040794465.1ScaffoldJBFNIL000000000SAMN40439062
coddigalapam13run1_SYM1
GCA_040794445.1ScaffoldJBFNIN000000000SAMN40439064
coddisantah006rep_SYM1
GCA_040794425.1ScaffoldJBFNIO000000000SAMN40439065
codorcahuit005_SYM1
GCA_040794405.1ScaffoldJBFNIP000000000SAMN40439066
codorcahuit006_SYM1
GCA_040793905.1ScaffoldJBFNJO000000000SAMN40439091
cteimstrist052_SYM1
GCA_040793895.1ScaffoldJBFNJN000000000SAMN40439090
cteimstrist051_SYM1
GCA_040793885.1ScaffoldJBFNJP000000000SAMN40439092
cteimstrist053_SYM1
GCA_040793845.1ScaffoldJBFNJQ000000000SAMN40439093
cteimstrist065run1_SYM1
GCA_040793855.1ScaffoldJBFNJR000000000SAMN40439094
cteimstrist066_SYM1
GCA_040793815.1ScaffoldJBFNJT000000000SAMN40439096
cteimstrist068run1_SYM1
GCA_040793755.1ScaffoldJBFNJV000000000SAMN40439098
cteimstrist070_SYM1
GCA_040793805.1ScaffoldJBFNJS000000000SAMN40439095
cteimstrist067_SYM1
GCA_040793765.1ScaffoldJBFNJU000000000SAMN40439097
cteimstrist069_SYM1
GCA_040793745.1ScaffoldJBFNJW000000000SAMN40439099
cteimstrist071_SYM1
GCA_040793685.1ScaffoldJBFNKB000000000SAMN40439104
cteimstrist080_SYM1
GCA_040793705.1ScaffoldJBFNJX000000000SAMN40439100
cteimstrist072_SYM1
GCA_040793675.1ScaffoldJBFNKA000000000SAMN40439103
cteimstrist075_SYM1
GCA_040793665.1ScaffoldJBFNJY000000000SAMN40439101
cteimstrist073_SYM1
GCA_040793645.1ScaffoldJBFNJZ000000000SAMN40439102
cteimstrist074_SYM1
GCA_040793615.1ScaffoldJBFNKF000000000SAMN40439108
cteimstrist093_SYM1
GCA_040793585.1ScaffoldJBFNKC000000000SAMN40439105
cteimstrist082_SYM1
GCA_040793565.1ScaffoldJBFNKG000000000SAMN40439109
cteimstrist094_SYM1
GCA_040793985.1ScaffoldJBFNJI000000000SAMN40439085
ctebehawaiim21_SYM1
GCA_040793965.1ScaffoldJBFNJM000000000SAMN40439089
ctebehawaiim21_SYM2
GCA_040794075.1ScaffoldJBFNJG000000000SAMN40439083
ctebefrenchm22_SYM1
GCA_040794175.1ScaffoldJBFNIY000000000SAMN40439075
codorpuntaj084run1_SYM1
GCA_040794365.1ScaffoldJBFNIR000000000SAMN40439068
codorflorid129run1_SYM1
GCA_040794345.1ScaffoldJBFNIT000000000SAMN40439070
codorfloridm01run1_SYM2
GCA_040794325.1ScaffoldJBFNIS000000000SAMN40439069
codorfloridm01run1_SYM1
GCA_040793195.1ScaffoldJBFNKU000000000SAMN40439124
cteimguadel007_SYM1
GCA_040792975.1ScaffoldJBFNLG000000000SAMN40439136
TimeNewSpPV25_SYM1
GCA_040792945.1ScaffoldJBFNLK000000000SAMN40439140
TimeNewSpPV23_SYM1
GCA_040792915.1ScaffoldJBFNLL000000000SAMN40439141
TimeNewSpPV26_SYM1
GCA_040793045.1ScaffoldJBFNLF000000000SAMN40439135
TimeNewSpPV24_SYM1
GCA_040793085.1ScaffoldJBFNLA000000000SAMN40439130
TimeNewSpPV15_SYM1
GCA_040793095.1ScaffoldJBFNLC000000000SAMN40439132
TimeNewSpPV20_SYM1
GCA_040793065.1ScaffoldJBFNLE000000000SAMN40439134
TimeNewSpPV22_SYM1
GCA_040793125.1ScaffoldJBFNKZ000000000SAMN40439129
unknostrist087_SYM1
GCA_040793545.1ScaffoldJBFNKE000000000SAMN40439107
cteimstrist092_SYM1
GCA_040793525.1ScaffoldJBFNKH000000000SAMN40439111
cteimbastim120run1_SYM1
GCA_040793505.1ScaffoldJBFNKI000000000SAMN40439112
cteimbastim121run1_SYM1
GCA_040793445.1ScaffoldJBFNKL000000000SAMN40439115
CteimGalet32_SYM1
GCA_040793415.1ScaffoldJBFNKM000000000SAMN40439116
CteimGalet28_SYM1
GCA_040793385.1ScaffoldJBFNKN000000000SAMN40439117
CteimGalet31_SYM1
GCA_040793265.1ScaffoldJBFNKV000000000SAMN40439125
cteimguadel008_SYM1
GCA_040793245.1ScaffoldJBFNKX000000000SAMN40439127
cteimguadel004_SYM2
GCA_040793325.1ScaffoldJBFNKR000000000SAMN40439121
CteimGalet33_SYM2
GCA_040792465.1ScaffoldJBFNMH000000000SAMN40439164
cteimcahuit020_SYM1
GCA_040791245.1ScaffoldJBFNOT000000000SAMN40439230
unknocarene034_SYM1
GCA_040791085.1ContigJBFNOX000000000SAMN40439110
cteimbastim119run1_SYM1
GCA_040791205.1ScaffoldJBFNOS000000000SAMN40439229
ctemesantah050_SYM2
GCA_040791185.1ScaffoldJBFNOU000000000SAMN40439231
cteimachet001_SYM1
GCA_040791165.1ContigJBFNOW000000000SAMN40439154
cteimcahuit014_SYM1
GCA_040791545.1ScaffoldJBFNOD000000000SAMN40439214
ctemesantah046_SYM1
GCA_040791405.1ScaffoldJBFNOJ000000000SAMN40439220
ctegasantah002_SYM2
GCA_040791385.1ScaffoldJBFNOK000000000SAMN40439221
ctemesantah007_SYM2
GCA_040791365.1ScaffoldJBFNON000000000SAMN40439224
ctemesantah037_SYM2
GCA_040791345.1ScaffoldJBFNOM000000000SAMN40439223
ctemesantah030_SYM2
GCA_040791325.1ScaffoldJBFNOL000000000SAMN40439222
ctemesantah014_SYM2
GCA_040791305.1ScaffoldJBFNOP000000000SAMN40439226
ctemesantah039_SYM2
GCA_040791285.1ScaffoldJBFNOO000000000SAMN40439225
ctemesantah038_SYM2
GCA_040792165.1ScaffoldJBFNMW000000000SAMN40439180
unknocarene033_SYM2
GCA_040792775.1ScaffoldJBFNLT000000000SAMN40439149
cteimcahuit007_SYM1
GCA_040792765.1ScaffoldJBFNLS000000000SAMN40439148
TimeNewSpPV27_SYM2
GCA_040792745.1ScaffoldJBFNLU000000000SAMN40439150
cteimcahuit008_SYM1
GCA_040791665.1ScaffoldJBFNNX000000000SAMN40439208
ctemesantah040_SYM1
GCA_040792685.1ScaffoldJBFNMA000000000SAMN40439157
cteimcahuit022_SYM1
GCA_040792655.1ScaffoldJBFNLW000000000SAMN40439152
cteimcahuit010_SYM1
GCA_040792675.1ScaffoldJBFNLX000000000SAMN40439153
cteimcahuit011_SYM1
GCA_040792645.1ScaffoldJBFNLY000000000SAMN40439155
cteimcahuit015_SYM1
GCA_040792625.1ScaffoldJBFNLZ000000000SAMN40439156
cteimcahuit019_SYM1
GCA_040792595.1ScaffoldJBFNME000000000SAMN40439161
cteimcahuit016_SYM1
GCA_040792585.1ScaffoldJBFNMB000000000SAMN40439158
cteimcahuit023_SYM1
GCA_040792545.1ScaffoldJBFNMF000000000SAMN40439162
cteimcahuit017_SYM1
GCA_040792535.1ScaffoldJBFNMC000000000SAMN40439159
cteimcahuit024_SYM1
GCA_040792525.1ScaffoldJBFNMD000000000SAMN40439160
cteimcahuit013_SYM1
GCA_040792495.1ScaffoldJBFNMG000000000SAMN40439163
cteimcahuit018_SYM1
GCA_040792485.1ScaffoldJBFNMI000000000SAMN40439165
cteimcahuit025_SYM1
GCA_040792445.1ScaffoldJBFNMK000000000SAMN40439167
cteimcahuit007_SYMT
GCA_040792405.1ScaffoldJBFNML000000000SAMN40439168
cteimcahuit008_SYMT
GCA_040792365.1ScaffoldJBFNMM000000000SAMN40439169
cteimcahuit009_SYMT
GCA_040792375.1ScaffoldJBFNMO000000000SAMN40439171
cteimcahuit011_SYMT
GCA_040792335.1ScaffoldJBFNMP000000000SAMN40439173
cteimcahuit015_SYMT
GCA_040792325.1ScaffoldJBFNMN000000000SAMN40439170
cteimcahuit010_SYMT
GCA_040792305.1ScaffoldJBFNMR000000000SAMN40439175
cteimcahuit021_SYM1
GCA_040792285.1ScaffoldJBFNMT000000000SAMN40439177
cteimcahuit023_SYMT
GCA_040792265.1ScaffoldJBFNMQ000000000SAMN40439174
cteimcahuit019_SYMT
GCA_040792225.1ScaffoldJBFNMS000000000SAMN40439176
cteimcahuit022_SYMT
GCA_040792235.1ScaffoldJBFNMU000000000SAMN40439178
cteimcahuit024_SYMT
GCA_040792825.1ScaffoldJBFNLR000000000SAMN40439147
TimeNewSpPV26_SYM2
GCA_040792785.1ScaffoldJBFNLQ000000000SAMN40439146
TimeNewSpPV23_SYM2
GCA_040793345.1ScaffoldJBFNKQ000000000SAMN40439120
CteimGalet31_SYM2
GCA_040793395.1ScaffoldJBFNKO000000000SAMN40439118
CteimGalet33_SYM1
GCA_040793455.1ScaffoldJBFNKK000000000SAMN40439114
CteimGalet30_SYM1
GCA_040793475.1ScaffoldJBFNKJ000000000SAMN40439113
CteimGalet29_SYM1
GCA_040792995.1ScaffoldJBFNLH000000000SAMN40439137
TimeNewSpPV16_SYM1
GCA_040792985.1ScaffoldJBFNLJ000000000SAMN40439139
TimeNewSpPV19_SYM1
GCA_040793115.1ScaffoldJBFNLD000000000SAMN40439133
TimeNewSpPV21_SYM1
GCA_040792875.1ScaffoldJBFNLM000000000SAMN40439142
TimeNewSpPV27_SYM1
GCA_040792845.1ScaffoldJBFNLO000000000SAMN40439144
TimeNewSpPV18_SYM2
SRA Data Details
ParameterValue
Data volume, Gbases756
Data volume, Tbytes0.35

Supplemental Content

Related Resources

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center