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Accession: PRJNA1073910 ID: 1073910

Salmonella enterica

Salmonella enterica Genome sequencing and assembly

See Genome Information for Salmonella enterica
GenomeTrakr Project: CDMX, Comision de Control Analitico y Ampliacion de Cobertura - COFEPRIS
AccessionPRJNA1073910
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismSalmonella enterica[Taxonomy ID: 28901]
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
SubmissionRegistration date: 27-Feb-2024
COFEPRIS-CCAYAC
Related Resources
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)100
SRA Experiments100
Other datasets
BioSample100
Assembly100
Assembly details:
Assembly levelNumber of Assemblies
100
100
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_036884145.1ContigABQKHK000000000SAMN40140490
COFEPRIS_CCAYAC_000010
GCA_036884125.1ContigABQKHG000000000SAMN40140489
COFEPRIS_CCAYAC_000009
GCA_036884105.1ContigABQKHH000000000SAMN40140488
COFEPRIS_CCAYAC_000008
GCA_036884085.1ContigABQKHI000000000SAMN40140487
COFEPRIS_CCAYAC_000007
GCA_036884065.1ContigABQKHF000000000SAMN40140485
COFEPRIS_CCAYAC_000005
GCA_036884045.1ContigABQKHJ000000000SAMN40140486
COFEPRIS_CCAYAC_000006
GCA_036884025.1ContigABQKHE000000000SAMN40140484
COFEPRIS_CCAYAC_000004
GCA_036884005.1ContigABQKHD000000000SAMN40140483
COFEPRIS_CCAYAC_000003
GCA_036883985.1ContigABQKHC000000000SAMN40140499
COFEPRIS_CCAYAC_000020
GCA_036883965.1ContigABQKHA000000000SAMN40140495
COFEPRIS_CCAYAC_000015
GCA_036883945.1ContigABQKGY000000000SAMN40140497
COFEPRIS_CCAYAC_000017
GCA_036883925.1ContigABQKHB000000000SAMN40140494
COFEPRIS_CCAYAC_000014
GCA_036883905.1ContigABQKGX000000000SAMN40140492
COFEPRIS_CCAYAC_000012
GCA_036883885.1ContigABQKGZ000000000SAMN40140493
COFEPRIS_CCAYAC_000013
GCA_036883845.1ContigABQKGV000000000SAMN40140482
COFEPRIS_CCAYAC_000002
GCA_036883865.1ContigABQKGW000000000SAMN40140491
COFEPRIS_CCAYAC_000011
GCA_036883825.1ContigABQKGU000000000SAMN40140481
COFEPRIS_CCAYAC_000001
GCA_037023555.1ContigABQOKV000000000SAMN40140498
COFEPRIS_CCAYAC_000018
GCA_037023535.1ContigABQOKR000000000SAMN40140496
COFEPRIS_CCAYAC_000016
GCA_038509735.1ContigABRXMF000000000SAMN41091847
COFEPRIS_CCAYAC_000070
GCA_038509715.1ContigABRXMD000000000SAMN41091833
COFEPRIS_CCAYAC_000056
GCA_038509355.1ContigABRXLU000000000SAMN41091850
COFEPRIS_CCAYAC_000073
GCA_038509425.1ContigABRXLV000000000SAMN41091825
COFEPRIS_CCAYAC_000048
GCA_038509415.1ContigABRXLW000000000SAMN41091830
COFEPRIS_CCAYAC_000053
GCA_038509745.1ContigABRXMH000000000SAMN41091837
COFEPRIS_CCAYAC_000060
GCA_038509725.1ContigABRXMI000000000SAMN41091852
COFEPRIS_CCAYAC_000075
GCA_038521545.1ContigABRXVS000000000SAMN41093569
COFEPRIS_CCAYAC_000087
GCA_038521505.1ContigABRXVP000000000SAMN41093582
COFEPRIS_CCAYAC_000100
GCA_038521465.1ContigABRXVO000000000SAMN41093572
COFEPRIS_CCAYAC_000090
GCA_038512655.1ContigABRXPE000000000SAMN41091832
COFEPRIS_CCAYAC_000055
GCA_038512615.1ContigABRXPC000000000SAMN41091849
COFEPRIS_CCAYAC_000072
GCA_038512575.1ContigABRXPD000000000SAMN41091827
COFEPRIS_CCAYAC_000050
GCA_038512555.1ContigABRXPB000000000SAMN41091840
COFEPRIS_CCAYAC_000063
GCA_038512075.1ContigABRXON000000000SAMN41091841
COFEPRIS_CCAYAC_000064
GCA_038511195.1ContigABRXNQ000000000SAMN41091854
COFEPRIS_CCAYAC_000077
GCA_038511135.1ContigABRXNP000000000SAMN41091853
COFEPRIS_CCAYAC_000076
GCA_038511115.1ContigABRXNS000000000SAMN41091831
COFEPRIS_CCAYAC_000054
GCA_038511125.1ContigABRXNO000000000SAMN41091828
COFEPRIS_CCAYAC_000051
GCA_038511105.1ContigABRXNR000000000SAMN41091829
COFEPRIS_CCAYAC_000052
GCA_038511015.1ContigABRXNH000000000SAMN41091842
COFEPRIS_CCAYAC_000065
GCA_038510985.1ContigABRXNJ000000000SAMN41091844
COFEPRIS_CCAYAC_000067
GCA_038510975.1ContigABRXNN000000000SAMN41091851
COFEPRIS_CCAYAC_000074
GCA_038510935.1ContigABRXNK000000000SAMN41091846
COFEPRIS_CCAYAC_000069
GCA_038510945.1ContigABRXNM000000000SAMN41091848
COFEPRIS_CCAYAC_000071
GCA_038510845.1ContigABRXNL000000000SAMN41091845
COFEPRIS_CCAYAC_000068
GCA_038510815.1ContigABRXNE000000000SAMN41091835
COFEPRIS_CCAYAC_000058
GCA_038510795.1ContigABRXNF000000000SAMN41091838
COFEPRIS_CCAYAC_000061
GCA_038510775.1ContigABRXNG000000000SAMN41091839
COFEPRIS_CCAYAC_000062
GCA_038510765.1ContigABRXNI000000000SAMN41091843
COFEPRIS_CCAYAC_000066
GCA_038514885.1ContigABRXQW000000000SAMN41091826
COFEPRIS_CCAYAC_000049
GCA_038513755.1ContigABRXQD000000000SAMN41091834
COFEPRIS_CCAYAC_000057
GCA_038513745.1ContigABRXQF000000000SAMN41091836
COFEPRIS_CCAYAC_000059
GCA_038516145.1ContigABRXRQ000000000SAMN41093584
COFEPRIS_CCAYAC_000102
GCA_038515875.1ContigABRXRL000000000SAMN41093568
COFEPRIS_CCAYAC_000086
GCA_038516825.1ContigABRXRU000000000SAMN41093560
COFEPRIS_CCAYAC_000078
GCA_038517615.1ContigABRXSR000000000SAMN41093564
COFEPRIS_CCAYAC_000082
GCA_038517605.1ContigABRXSP000000000SAMN41093563
COFEPRIS_CCAYAC_000081
GCA_038517595.1ContigABRXSQ000000000SAMN41093566
COFEPRIS_CCAYAC_000084
GCA_038517585.1ContigABRXST000000000SAMN41093567
COFEPRIS_CCAYAC_000085
GCA_038517555.1ContigABRXSO000000000SAMN41093587
COFEPRIS_CCAYAC_000105
GCA_038517405.1ContigABRXSM000000000SAMN41093585
COFEPRIS_CCAYAC_000103
GCA_038517475.1ContigABRXSL000000000SAMN41093583
COFEPRIS_CCAYAC_000101
GCA_038517385.1ContigABRXSN000000000SAMN41093586
COFEPRIS_CCAYAC_000104
GCA_038517395.1ContigABRXSK000000000SAMN41093581
COFEPRIS_CCAYAC_000099
GCA_038517375.1ContigABRXSJ000000000SAMN41093580
COFEPRIS_CCAYAC_000098
GCA_038517295.1ContigABRXSG000000000SAMN41093579
COFEPRIS_CCAYAC_000097
GCA_038517245.1ContigABRXSE000000000SAMN41093578
COFEPRIS_CCAYAC_000096
GCA_038517235.1ContigABRXSC000000000SAMN41093575
COFEPRIS_CCAYAC_000093
GCA_038517205.1ContigABRXSF000000000SAMN41093562
COFEPRIS_CCAYAC_000080
GCA_038517185.1ContigABRXSH000000000SAMN41093577
COFEPRIS_CCAYAC_000095
GCA_038517065.1ContigABRXSD000000000SAMN41093574
COFEPRIS_CCAYAC_000092
GCA_038517055.1ContigABRXSA000000000SAMN41093571
COFEPRIS_CCAYAC_000089
GCA_038517035.1ContigABRXRW000000000SAMN41093570
COFEPRIS_CCAYAC_000088
GCA_038516985.1ContigABRXRZ000000000SAMN41093573
COFEPRIS_CCAYAC_000091
GCA_038516995.1ContigABRXSI000000000SAMN41093576
COFEPRIS_CCAYAC_000094
GCA_038516845.1ContigABRXRX000000000SAMN41093561
COFEPRIS_CCAYAC_000079
GCA_038522885.1ContigABRXWK000000000SAMN41093565
COFEPRIS_CCAYAC_000083
GCA_037547475.1ContigABRAIQ000000000SAMN40443422
COFEPRIS_CCAYAC_000034
GCA_037156715.1ContigABQRKW000000000SAMN40443419
COFEPRIS_CCAYAC_000030
GCA_037156695.1ContigABQRKT000000000SAMN40443415
COFEPRIS_CCAYAC_000026
GCA_037156675.1ContigABQRKV000000000SAMN40443417
COFEPRIS_CCAYAC_000028
GCA_037156655.1ContigABQRKS000000000SAMN40443418
COFEPRIS_CCAYAC_000029
GCA_037156635.1ContigABQRKU000000000SAMN40443416
COFEPRIS_CCAYAC_000027
GCA_037156615.1ContigABQRKR000000000SAMN40443414
COFEPRIS_CCAYAC_000025
GCA_037156595.1ContigABQRKP000000000SAMN40443413
COFEPRIS_CCAYAC_000024
GCA_037156575.1ContigABQRKQ000000000SAMN40443432
COFEPRIS_CCAYAC_000047
GCA_037156555.1ContigABQRKO000000000SAMN40443431
COFEPRIS_CCAYAC_000046
GCA_037156535.1ContigABQRKM000000000SAMN40443412
COFEPRIS_CCAYAC_000023
GCA_037156515.1ContigABQRKL000000000SAMN40443429
COFEPRIS_CCAYAC_000044
GCA_037156495.1ContigABQRKN000000000SAMN40443430
COFEPRIS_CCAYAC_000045
GCA_037156475.1ContigABQRKK000000000SAMN40443428
COFEPRIS_CCAYAC_000043
GCA_037156455.1ContigABQRKJ000000000SAMN40443427
COFEPRIS_CCAYAC_000041
GCA_037156435.1ContigABQRKH000000000SAMN40443425
COFEPRIS_CCAYAC_000039
GCA_037156415.1ContigABQRKG000000000SAMN40443424
COFEPRIS_CCAYAC_000038
GCA_037156395.1ContigABQRKI000000000SAMN40443426
COFEPRIS_CCAYAC_000040
GCA_037156375.1ContigABQRKF000000000SAMN40443423
COFEPRIS_CCAYAC_000036
GCA_037156355.1ContigABQRKE000000000SAMN40443421
COFEPRIS_CCAYAC_000033
GCA_037156335.1ContigABQRKB000000000SAMN40443410
COFEPRIS_CCAYAC_000021
GCA_037156315.1ContigABQRKD000000000SAMN40443420
COFEPRIS_CCAYAC_000031
GCA_037156295.1ContigABQRKC000000000SAMN40443411
COFEPRIS_CCAYAC_000022
SRA Data Details
ParameterValue
Data volume, Gbases36
Data volume, Mbytes17881

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