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Accession: PRJNA454550 ID: 454550

Streptococcus infantarius subsp. infantarius

Assessment of the genetic variability of Streptococcus infantarius subsp. infantarius strains isolated from food gut, and clinical samples

See Genome Information for Streptococcus infantarius
This study aims delineating population structure and specific genes present in Streptococcus infantarius subsp. More...
AccessionPRJNA454550
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismStreptococcus infantarius subsp. infantarius[Taxonomy ID: 150054]
Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus infantarius; Streptococcus infantarius subsp. infantarius
SubmissionRegistration date: 27-Jun-2022
Micalis Institute UMR1319
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)122
Other datasets
BioSample122
Assembly122
Assembly details:
Assembly levelNumber of Assemblies
2
120
122
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_023926505.1ContigQIMU00000000SAMN09206524
CCUG46015
GCA_023926485.1ContigQIMT00000000SAMN09206525
NTUH-8
GCA_023926455.1ScaffoldQIMR00000000SAMN09206527
POZ_25124
GCA_023926445.1ContigQIMS00000000SAMN09206526
ANSES 6953
GCA_023926425.1ContigQIMQ00000000SAMN09206528
POZ_5032
GCA_023926405.1ContigQIMP00000000SAMN09206529
POZ_6811
GCA_023926385.1ContigQIMM00000000SAMN09206532
Ko_C12
GCA_023926355.1ContigQIMN00000000SAMN09206531
POZ_11
GCA_023926345.1ContigQIMO00000000SAMN09206530
POZ_8432
GCA_023927125.1ContigQINZ00000000SAMN09206493
CDI10
GCA_023927135.1ContigQINW00000000SAMN09206496
Ko_C03
GCA_023927105.1ContigQINY00000000SAMN09206494
Ko_C10
GCA_023927065.1ContigQINX00000000SAMN09206495
Ko_S04
GCA_023927045.1ContigQINU00000000SAMN09206498
CDI07
GCA_023927035.1ContigQINT00000000SAMN09206499
Ko_S16
GCA_023927025.1ContigQINV00000000SAMN09206497
Ko_C04
GCA_023927005.1ContigQINS00000000SAMN09206500
J2-40-2
GCA_023926985.1ContigQINR00000000SAMN09206501
TJ01
GCA_023926965.1ContigQINQ00000000SAMN09206502
TJ03
GCA_023926915.1ContigQINO00000000SAMN09206504
Is_F05
GCA_023926925.1ContigQINP00000000SAMN09206503
CDI03
GCA_023926905.1ContigQINN00000000SAMN09206505
Is_F10
GCA_023926885.1ContigQINL00000000SAMN09206507
Is_F08
GCA_023926865.1ContigQINM00000000SAMN09206506
Is_F06
GCA_023926835.1ContigQINK00000000SAMN09206508
Is_F21
GCA_023926825.1ContigQINJ00000000SAMN09206509
Is_F09
GCA_023926805.1ContigQINI00000000SAMN09206510
Is_F12
GCA_023926785.1ContigQINH00000000SAMN09206511
Is_F29
GCA_023926765.1ContigQINF00000000SAMN09206513
Is_F22
GCA_023926745.1ContigQING00000000SAMN09206512
Is_F27
GCA_023926725.1ContigQINE00000000SAMN09206514
42
GCA_023926705.1ContigQIND00000000SAMN09206515
5147432-1
GCA_023926685.1ContigQINC00000000SAMN09206516
5334570
GCA_023926655.1ContigQINA00000000SAMN09206518
CCUG44960
GCA_023926635.1ContigQIMZ00000000SAMN09206519
P-24
GCA_023926625.1ContigQINB00000000SAMN09206517
P-9
GCA_023926605.1ContigQIMY00000000SAMN09206520
CCUG38214
GCA_023926585.1ContigQIMW00000000SAMN09206522
CDI06
GCA_023926565.1ContigQIMX00000000SAMN09206521
CDI01
GCA_023926545.1ContigQIMV00000000SAMN09206523
CDI11
GCA_023931165.1ContigQIPN00000000SAMN09206453
Ko_S21
GCA_023931145.1ContigQIPL00000000SAMN09206455
D616
GCA_023931125.1ContigQIPJ00000000SAMN09206457
D1309
GCA_023931085.1ContigQIPI00000000SAMN09206458
D261
GCA_023931105.1ContigQIPK00000000SAMN09206456
TJ02
GCA_023931065.1ContigQIPH00000000SAMN09206459
D570
GCA_023931045.1ContigQIPG00000000SAMN09206460
D1461
GCA_023931025.1ContigQIPF00000000SAMN09206461
D1460
GCA_023931005.1ContigQIPD00000000SAMN09206463
Ko_S10
GCA_023930965.1ContigQIPE00000000SAMN09206462
Ko_C16
GCA_023930975.1ContigQIPC00000000SAMN09206464
Ko_C09
GCA_023930945.1ContigQIPB00000000SAMN09206465
D1436
GCA_023930925.1ContigQIPA00000000SAMN09206466
TJ04
GCA_023930905.1ContigQIOZ00000000SAMN09206467
D651
GCA_023930885.1ContigQIOX00000000SAMN09206469
Ko_S06
GCA_023930855.1ContigQIOW00000000SAMN09206470
Ko_S18
GCA_023930845.1ContigQIOY00000000SAMN09206468
Ko_S02
GCA_023930825.1ContigQIOV00000000SAMN09206471
D1382
GCA_023930795.1ContigQIOU00000000SAMN09206472
Is_F02
GCA_023930785.1ContigQIOS00000000SAMN09206474
CDI02
GCA_023930755.1ContigQIOR00000000SAMN09206475
11FA-1
GCA_023930745.1ContigQIOT00000000SAMN09206473
Is_F16
GCA_023930725.1ContigQIOQ00000000SAMN09206476
Ko_S13
GCA_023930695.1ScaffoldQIOM00000000SAMN09206480
3AG-1
GCA_023930685.1ContigQION00000000SAMN09206479
Ko_S11
GCA_023930645.1ContigQIOO00000000SAMN09206478
Ko_C07
GCA_023930635.1ContigQIOP00000000SAMN09206477
Ko_S03
GCA_023930625.1ContigQIOL00000000SAMN09206481
CDI04
GCA_023930595.1ContigQIOJ00000000SAMN09206483
CDI08
GCA_023930555.1ContigQIOI00000000SAMN09206484
CDI09
GCA_023930535.1ContigQIOG00000000SAMN09206486
Ko_C01
GCA_023930545.1ContigQIOK00000000SAMN09206482
Ko_C05
GCA_023930525.1ContigQIOH00000000SAMN09206485
CDI05
GCA_023930495.1ContigQIOE00000000SAMN09206488
Ko_S14
GCA_023930485.1ContigQIOF00000000SAMN09206487
Ko_C14
GCA_023930415.1ContigQIOC00000000SAMN09206490
Ko_C02
GCA_023930405.1ContigQIOD00000000SAMN09206489
Ko_S15
GCA_023930425.1ContigQIOB00000000SAMN09206491
Ko_C13
GCA_023930315.1ContigQIOA00000000SAMN09206492
Ko_C06
GCA_023931245.1ContigQIPQ00000000SAMN09206450
Ko_S12
GCA_023931195.1ContigQIPM00000000SAMN09206454
Ko_S22
GCA_023931225.1ContigQIPO00000000SAMN09206452
Ko_S17
GCA_023931185.1ContigQIPP00000000SAMN09206451
Ko_S19
GCA_023931995.1ContigQIRB00000000SAMN09206413
CDI12
GCA_023931985.1ContigQIRC00000000SAMN09206412
CJ250
GCA_023931955.1ContigQIQZ00000000SAMN09206415
Is_F04
GCA_023931945.1ContigQIRA00000000SAMN09206414
Is_F13
GCA_023931925.1ContigQIQY00000000SAMN09206416
CDI13
GCA_023931895.1ContigQIQX00000000SAMN09206417
CDI14
GCA_023931885.1ContigQIQW00000000SAMN09206418
Is_F18
GCA_023931865.1ContigQIQV00000000SAMN09206419
Is_F19
GCA_023931845.1ContigQIQT00000000SAMN09206421
Is_F20
GCA_023931825.1ContigQIQS00000000SAMN09206422
Is_F03
GCA_023931805.1ContigQIQU00000000SAMN09206420
Is_F14
GCA_023931785.1ContigQIQR00000000SAMN09206423
Is_F23
GCA_023931765.1ContigQIQP00000000SAMN09206425
Is_F07
GCA_023931745.1ContigQIQQ00000000SAMN09206424
Is_F24
GCA_023931715.1ContigQIQM00000000SAMN09206428
CJ246
GCA_023931705.1ContigQIQO00000000SAMN09206426
Is_F26
GCA_023931685.1ContigQIQN00000000SAMN09206427
Is_F15
GCA_023931665.1ContigQIQL00000000SAMN09206429
CJi0767
GCA_023931635.1ContigQIQH00000000SAMN09206433
CCUG35647
GCA_023931625.1ContigQIQK00000000SAMN09206430
CDI15
GCA_023931595.1ContigQIQI00000000SAMN09206432
Is_F25
GCA_023931585.1ContigQIQJ00000000SAMN09206431
Is_F01
GCA_023931565.1ContigQIQG00000000SAMN09206434
CJ150A
GCA_023931545.1ContigQIQF00000000SAMN09206435
CJ251
GCA_023931505.1ContigQIQE00000000SAMN09206436
CJi0365
GCA_023931495.1ContigQIQD00000000SAMN09206437
Ko_C18
GCA_023931485.1ContigQIQC00000000SAMN09206438
Ko_C11
GCA_023931465.1ContigQIQB00000000SAMN09206439
Ko_S01
GCA_023931445.1ContigQIPZ00000000SAMN09206441
Ko_S08
GCA_023931425.1ContigQIQA00000000SAMN09206440
Ko_S05
GCA_023931405.1ContigQIPX00000000SAMN09206443
D726
GCA_023931385.1ContigQIPY00000000SAMN09206442
D105
GCA_023931365.1ContigQIPW00000000SAMN09206444
D1095
GCA_023931345.1ContigQIPU00000000SAMN09206446
Ko_C08
GCA_023931325.1ContigQIPV00000000SAMN09206445
D230
GCA_023931305.1ContigQIPS00000000SAMN09206448
D634
GCA_023931285.1ContigQIPT00000000SAMN09206447
Ko_C15
GCA_023931265.1ContigQIPR00000000SAMN09206449
Ko_S09
GCA_023932105.1ContigQIRD00000000SAMN09206411
CJ244

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