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BioProject

Organizing biological data

Links from Gene

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Select item 7344431.

Australian C. difficile reference genomes

: Project data type: Raw sequence reads

Scope:: Multispecies

University of Western Australia

Accession:: PRJNA734443
ID:: 734443

Select item 5903952.

Metronidazole resistance in Clostridioides difficile is conferred by a plasmid

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Wageningen University

Accession:: PRJEB24167
ID:: 590395

Select item 5623283.

Clostridioides difficile strain:ATCC BAA-1801

Clostridioides difficile strain:ATCC BAA-1801 Genome sequencing and assembly

Taxonomy:: Clostridioides difficile

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Massachusetts Institute of Technology

Accession:: PRJNA562328
ID:: 562328

Select item 5242994.

Clostridioides difficile

Linking Clostridium difficile genome structure, microbiome composition, and host metabolomic signatures to disease severity in a pediatric inflammatory bowel disease cohort

Taxonomy:: Clostridioides difficile

: Project data type: Genome sequencing and assembly

Scope:: Multiisolate

University of Pennsylvania

Accession:: PRJNA524299
ID:: 524299

Select item 5188995.

Clostridioides difficile

Within-host diversity of Clostridioides difficile in children

Taxonomy:: Clostridioides difficile

: Project data type: Genome sequencing and assembly

Scope:: Multiisolate

Ann & Robert H. Lurie Children's Hospital of Chicago

Accession:: PRJNA518899
ID:: 518899

Select item 5046396.

Clostridioides difficile

Clostridioides difficile Genome sequencing and assembly

Taxonomy:: Clostridioides difficile

: Project data type: Genome sequencing and assembly

Scope:: Multiisolate

WRAIR

Accession:: PRJNA504639
ID:: 504639

Select item 4870857.

Clostridioides difficile

Clostridioides difficile strains colonizing infants

Taxonomy:: Clostridioides difficile

: Project data type: Genome sequencing and assembly

Scope:: Multiisolate

Ann & Robert H. Lurie Children's Hospital of Chicago

Accession:: PRJNA487085
ID:: 487085

Select item 4483908.

Clostridioides difficile

Clostridioides difficile Genome sequencing and assembly

Taxonomy:: Clostridioides difficile

: Project data type: Genome sequencing and assembly

Scope:: Multiisolate

Icahn School of Medicine at Mount Sinai

Accession:: PRJNA448390
ID:: 448390

Select item 4457669.

Clostridioides difficile

Investigation of large cryptic plasmids in Clostridioides difficile

Taxonomy:: Clostridioides difficile

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

The University of Melbourne

Accession:: PRJNA445766
ID:: 445766

Select item 43932410.

Clostridioides difficile strain:DSM 105001

Clostridioides difficile strain:DSM 105001 Genome sequencing and assembly

Taxonomy:: Clostridioides difficile

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

University Medical Center Goettingen

Accession:: PRJNA439324
ID:: 439324

Select item 43848211.

Clostridioides difficile

Clostridioides difficile Genome sequencing and assembly from Flagstaff, Arizona

Taxonomy:: Clostridioides difficile

: Project data type: Genome sequencing and assembly

Scope:: Multiisolate

Northern Arizona University

Accession:: PRJNA438482
ID:: 438482

Select item 43332912.

Clostridioides difficile strain:AK

Clostridioides difficile strain:AK Genome sequencing

Taxonomy:: Clostridioides difficile

: Project data type: Genome sequencing

Scope:: Monoisolate

Los Alamos National Laboratory

Accession:: PRJNA433329
ID:: 433329

Select item 42006713.

Clostridioides difficile

Clostridium difficile infections

Taxonomy:: Clostridioides difficile

: Project data type: Genome sequencing

Scope:: Multiisolate

New York Medical College

Accession:: PRJNA420067
ID:: 420067

Select item 39370414.

Clostridioides difficile strain:DH/NAP11/106/ST-42 | isolate:hospitalized pediatric patient

Clostridioides difficile strain:DH/NAP11/106/ST-42 | isolate:hospitalized pediatric patient Genome sequencing

Taxonomy:: Clostridioides difficile

: Project data type: Genome sequencing

Scope:: Monoisolate

Northwestern University

Accession:: PRJNA393704
ID:: 393704

Select item 36945815.

Clostridioides difficile strain:BR81

Full Genome sequencing and assembly of Clostridium difficile

Taxonomy:: Clostridioides difficile

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Kyung Hee University

Accession:: PRJNA369458
ID:: 369458

Select item 35292116.

Clostridioides difficile strain:NT049

Clostridioides difficile strain:NT049 Genome sequencing and assembly

Taxonomy:: Clostridioides difficile

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Public Health Agency of Sweden

Accession:: PRJNA352921
ID:: 352921

Select item 34023817.

Clostridioides difficile

Genome sequencing and assembly of clinical Clostridium difficile isolates from children

Taxonomy:: Clostridioides difficile

: Project data type: Genome sequencing and assembly

Scope:: Multiisolate

Ann & Robert H. Lurie Children's Hospital of Chicago

Accession:: PRJNA340238
ID:: 340238

Select item 32910918.

Clostridium difficile

This project encompasses Clostridium difficile, Staphylococcus aureus and Candida krusei all sequenced on the PacBio platform. Genome sequencing and assembly