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Items: 18

1.

Australian C. difficile reference genomes

Project data type: Raw sequence reads
Scope:
Multispecies
University of Western Australia
Accession:
PRJNA734443
ID:
734443
2.

Clostridioides difficile

Linking Clostridium difficile genome structure, microbiome composition, and host metabolomic signatures to disease severity in a pediatric inflammatory bowel disease cohort

Taxonomy:
Clostridioides difficile
Project data type: Genome sequencing and assembly
Scope:
Multiisolate
University of Pennsylvania
Accession:
PRJNA524299
ID:
524299
3.

Clostridioides difficile

Within-host diversity of Clostridioides difficile in children

Taxonomy:
Clostridioides difficile
Project data type: Genome sequencing and assembly
Scope:
Multiisolate
Ann & Robert H. Lurie Children's Hospital of Chicago
Accession:
PRJNA518899
ID:
518899
4.

Clostridioides difficile

Clostridioides difficile Genome sequencing and assembly

Taxonomy:
Clostridioides difficile
Project data type: Genome sequencing and assembly
Scope:
Multiisolate
WRAIR
Accession:
PRJNA504639
ID:
504639
5.

Clostridioides difficile

Clostridioides difficile Genome sequencing and assembly

Taxonomy:
Clostridioides difficile
Project data type: Genome sequencing and assembly
Scope:
Multiisolate
Icahn School of Medicine at Mount Sinai
Accession:
PRJNA448390
ID:
448390
6.

Clostridioides difficile

Investigation of large cryptic plasmids in Clostridioides difficile

Taxonomy:
Clostridioides difficile
Project data type: Genome sequencing and assembly
Scope:
Multispecies
The University of Melbourne
Accession:
PRJNA445766
ID:
445766
7.

Clostridioides difficile

Clostridium difficile infections

Taxonomy:
Clostridioides difficile
Project data type: Genome sequencing
Scope:
Multiisolate
New York Medical College
Accession:
PRJNA420067
ID:
420067
8.

Clostridioides difficile

Genome sequencing and assembly of clinical Clostridium difficile isolates from children

Taxonomy:
Clostridioides difficile
Project data type: Genome sequencing and assembly
Scope:
Multiisolate
Ann & Robert H. Lurie Children's Hospital of Chicago
Accession:
PRJNA340238
ID:
340238
9.

Clostridium difficile

This project encompasses Clostridium difficile, Staphylococcus aureus and Candida krusei all sequenced on the PacBio platform. Genome sequencing and assembly

Project data type: Genome sequencing and assembly
Scope:
Multispecies
Broad Institute
Accession:
PRJNA329109
ID:
329109
10.

Clostridioides difficile

Clostridioides difficile Genome sequencing and assembly

Taxonomy:
Clostridioides difficile
Project data type: Genome sequencing and assembly
Scope:
Multiisolate
The Chinese University of Hong Kong
Accession:
PRJNA308789
ID:
308789
11.

VRECD_water

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
Wellcome Sanger Institute
Accession:
PRJEB8767
ID:
295828
12.

NCTC_3000

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
Wellcome Sanger Institute
Accession:
PRJEB6403
ID:
251923
13.

Clostridium_difficile_clinical_samples

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
Wellcome Sanger Institute
Accession:
PRJEB4347
ID:
237869
14.

Clostridioides difficile strain:RC10

Clostridioides difficile strain:RC10 Genome sequencing and assembly

Taxonomy:
Clostridioides difficile
Project data type: Genome sequencing and assembly
Scope:
Monoisolate
Universidad de Zaragoza
Accession:
PRJNA227079
ID:
227079
15.

Refseq Prokaryotic Genome Annotation Project

Project data type: RefSeq Other
Scope:
Multispecies
NCBI
Accession:
PRJNA224116
ID:
224116
16.

Clostridium difficile 078 diversity

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
Wellcome Sanger Institute
Accession:
PRJEB3012
ID:
204689
17.

Clostridium difficile ribotype 027 resequencing

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
Wellcome Sanger Institute
Accession:
PRJEB2207
ID:
203920
18.

Clostridium difficile Ribotype Reference Genome Project

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
Wellcome Sanger Institute
Accession:
PRJEB2101
ID:
203737

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