See
Genome Information for Rattus norvegicus
The reference sequence (RefSeq) genome assembly is derived from the submitted GenBank assembly (see linked project PRJNA1027884). Annotation provided on the RefSeq genomic records is based on NCBI annotation pipeline.
| Accession | PRJNA1074393 |
| Data Type | RefSeq Raw sequence reads |
| Scope | Multispecies |
| Organism | Rattus norvegicus[Taxonomy ID: 10116] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus; Rattus norvegicus |
| Publications | Li K et al., "Construction and evaluation of a new rat reference genome assembly, GRCr8, from long reads and long-range scaffolding.", Genome Res, 2024 Nov 20;34(11):2081-2093 |
| Submission | Registration date: 31-Jan-2024
Genome Reference Consortium- Sanger Institute- Medical College of Wisconsin - University of Texas McGovern Medical School |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 88728 |
| Transcript | 88630 |
| Protein Sequences | 85576 |
| Publications |
| PubMed | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 1 |
Related Project Category: RefseqGenbank
PRJNA1027884 : A reference genome assembly of Rattus norvegicus from the Brown Norway inbred rat strain constructed from HiFi reads and long range scaffolding