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Organizing biological data

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Select item 7739841.

Citrobacter freundii strain:Cf.1 | isolate:farm

Citrobacter freundii strain:Cf.1 | isolate:farm Genome sequencing

Taxonomy:: Citrobacter freundii

: Project data type: Genome sequencing

Scope:: Monoisolate

Guangxi University

Accession:: PRJNA773984
ID:: 773984

Select item 7729132.

Molecular characterization of VIM-producing Enterobacterales from Czech hospitals

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

Charles University in Prague

Accession:: PRJNA772913
ID:: 772913

Select item 7660393.

Citrobacter freundii

Citrobacter freundii Genome sequencing and assembly

Taxonomy:: Citrobacter freundii

: Project data type: Genome sequencing and assembly

Scope:: Multiisolate

The First Affiliated Hospital of Wenzhou Medical University

Accession:: PRJNA766039
ID:: 766039

Select item 7627334.

Enterobacterales

Whole-genome sequencing of carbapenemase-producing enterobacterales in Toho University Omori Medical Center, Tokyo, Japan

Taxonomy:: Enterobacterales

: Project data type: Genome sequencing and assembly

Scope:: Multiisolate

Toho University

Accession:: PRJDB12305
ID:: 762733

Select item 7566465.

food metagenome

Molecular analysis of multidrug-resistant and virulent potential Citrobacter freundii RTE-E5 isolated from ready-to-eat foods retailed in Dhaka, Bangladesh

Taxonomy:: food metagenome

: Project data type: Metagenome

Scope:: Environment

Food Microbiology, Food Science and Technology, Tokyo University of Marine Science and Technology

Accession:: PRJDB12158
ID:: 756646

Select item 7005166.

Molecular characterization of KPC-producing Enterobacterales from Czech hospitals; evidence of an epidemic spread

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

Charles University in Prague

Accession:: PRJNA700516
ID:: 700516

Select item 6929017.

Citrobacter freundii sp. PSV genome

Complete genome of Citrobacter freundii sp. PSV, isolated from a crude-oil-degrading consortium

: Project data type: Other

Scope:: Monoisolate

Genetique Moleculaire, Genomique, Microbiologie (GMGM), Universite de Strasbourg

Accession:: PRJEB40360
ID:: 692901

Select item 6683028.

wastewater metagenome

Metagenomic survey and whole genome sequencing of antimicrobial resistant bacteria in Japanese hospital sewage

Taxonomy:: wastewater metagenome

: Project data type: Other

Scope:: Other

Laboratory of Bacterial Genomics, Pathogen Genomics Center, National Institute of Infectious Diseases

Accession:: PRJDB9036
ID:: 668302

Select item 6475489.

Enterobacter hormaechei

Enterobacter hormaechei Genome sequencing

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

Charles University in Prague

Accession:: PRJNA647548
ID:: 647548

Select item 64234810.

Citrobacter freundii strain:M92

Citrobacter freundii strain:M92 Genome sequencing

Taxonomy:: Citrobacter freundii

: Project data type: Genome sequencing

Scope:: Monoisolate

Chinese Academy of Agricultural Sciences

Accession:: PRJNA642348
ID:: 642348

Select item 63682711.

Nanopore MinION sequencing reveals possible transfer of blaKPC-2 plasmid across bacterial species in two healthcare facilities

: Project data type: Genome sequencing

Scope:: Multispecies

Wadsworth Center, New York State Department of Health

Accession:: PRJNA636827
ID:: 636827

Select item 62719412.

Clinical isolates sequencing

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

Scientific Center for Anti-infectious Drugs (SCAID)

Accession:: PRJNA627194
ID:: 627194

Select item 60514713.

Enterobacterales

The environmental REsistome: confluence of Human and Animal Biota in antibiotic resistance spread (REHAB)

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

The REHAB Consortium

Accession:: PRJNA605147
ID:: 605147

Select item 60471514.

Citrobacter freundii strain:CitB

Citrobacter freundii strain:CitB Genome sequencing

Taxonomy:: Citrobacter freundii

: Project data type: Genome sequencing

Scope:: Monoisolate

Universidade Federal de Sao paulo

Accession:: PRJNA604715
ID:: 604715

Select item 60410015.

Environmental dissemination of Carbapenemase-producing Enterobacteriaceae in Switzerland

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

University of Zurich

Accession:: PRJNA604100
ID:: 604100

Select item 59940416.

Dissemination of VIM plasmids among clinical and environmental Enterobacteriacae isolates in Ontario

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

Public Health Ontario

Accession:: PRJNA599404
ID:: 599404

Select item 59902417.

Citrobacter freundii

Citrobacter freundii Genome sequencing and assembly

Taxonomy:: Citrobacter freundii

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Center for Disease Control and Prevention of PLA

Accession:: PRJNA599024
ID:: 599024

Select item 59719718.

Citrobacter freundii strain:LDL3-3

Citrobacter freundii strain:LDL3-3 Genome sequencing

Taxonomy:: Citrobacter freundii

: Project data type: Genome sequencing

Scope:: Monoisolate

south China agricultural university

Accession:: PRJNA597197
ID:: 597197

Select item 59213419.

Novel type of Carbapenem-hydrolyzing Oxacillinase on resistance plasmid Inc A/C2 conferring multi-drug resistance to Citrobacter freundii.

: Project data type: Raw sequence reads

Scope:: Multispecies

tel-aviv sourasky medical center

Accession:: PRJNA592134
ID:: 592134

Select item 58949620.

Citrobacter freundii

Citrobacter freundii Assembly

Taxonomy:: Citrobacter freundii

: Project data type: Assembly

Scope:: Multiisolate

Center for Disease Control and Prevention of PLA

Accession:: PRJNA589496
ID:: 589496

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