Klebsiella (ID 414542) - BioProject

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Accession: PRJNA414542 ID: 414542

Klebsiella

Genomic study of Klebsiella in bovine

We studied the genomic structure, antimicrobial resistance, and virulence of Klebsiella pneumoniae in bovine and humans

Accession	PRJNA414542
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Klebsiella[Taxonomy ID: 570] Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella
Grants	"the Agriculture and Food Research Initiative Competitive Grant" (Grant ID 2013-67015-21233, United States Dept of Agriculture)
Submission	Registration date: 3-Jan-2018 Cornell University

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	121192
WGS master	81
Protein Sequences	485955
Other datasets
BioSample	96
Assembly	81

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

48
33
81

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_002857365.1	PIBX00000000	SAMN07793220	D1	Klebsiella michiganensis
GCA_002856985.1	PIDR00000000	SAMN07793278	A10	Klebsiella michiganensis
GCA_002856965.1	PIDU00000000	SAMN07793281	D40	Klebsiella michiganensis
GCA_002856295.1	PIEI00000000	SAMN07793297	D51	Klebsiella michiganensis
GCA_002856265.1	PIET00000000	SAMN07793213	A2	Klebsiella michiganensis
GCA_002856195.1	PICF00000000	SAMN07793233	D14	Klebsiella michiganensis
GCA_002856085.1	PIDS00000000	SAMN07793279	A11	Klebsiella michiganensis
GCA_002856155.1	PICM00000000	SAMN07793244	C17	Klebsiella pneumoniae
GCA_002856055.1	PICW00000000	SAMN07793255	D23	Klebsiella pneumoniae
GCA_002856065.1	PIDA00000000	SAMN07793259	C28	Klebsiella pneumoniae
GCA_002856075.1	PICT00000000	SAMN07793251	C23	Klebsiella pneumoniae
GCA_002856145.1	PICO00000000	SAMN07793246	C20	Klebsiella pneumoniae
GCA_002856225.1	PICD00000000	SAMN07793231	D11	Klebsiella pneumoniae
GCA_002856235.1	PIBV00000000	SAMN07793217	C3	Klebsiella pneumoniae
GCA_002856185.1	PICG00000000	SAMN07793234	D15	Klebsiella pneumoniae
GCA_002856325.1	PIEC00000000	SAMN07793290	C41	Klebsiella pneumoniae
GCA_002856315.1	PIED00000000	SAMN07793291	C42	Klebsiella pneumoniae
GCA_002856455.1	PIDM00000000	SAMN07793273	D36	Klebsiella pneumoniae
GCA_002856415.1	PIDT00000000	SAMN07793280	D39	Klebsiella pneumoniae
GCA_002856395.1	PIDZ00000000	SAMN07793286	C36	Klebsiella pneumoniae
GCA_002856385.1	PIDX00000000	SAMN07793284	D44	Klebsiella pneumoniae
GCA_002857345.1	PIES00000000	SAMN07793223	D4	Klebsiella pneumoniae
GCA_002857315.1	PICA00000000	SAMN07793226	C6	Klebsiella pneumoniae
GCA_002857275.1	PICC00000000	SAMN07793230	C9	Klebsiella pneumoniae
GCA_002855815.1	PIER00000000	SAMN07793306	D68	Klebsiella pneumoniae
GCA_002855825.1	PIEO00000000	SAMN07793303	D62	Klebsiella pneumoniae
GCA_002856015.1	PIDB00000000	SAMN07793260	C29	Klebsiella pneumoniae
GCA_002855985.1	PIDG00000000	SAMN07793266	C35	Klebsiella pneumoniae
GCA_002856025.1	PICR00000000	SAMN07793249	D20	Klebsiella pneumoniae
GCA_002855955.1	PIDI00000000	SAMN07793268	D27	Klebsiella pneumoniae
GCA_002855935.1	PIDY00000000	SAMN07793285	D45	Klebsiella pneumoniae
GCA_002855875.1	PIEH00000000	SAMN07793296	D48	Klebsiella pneumoniae
GCA_002855915.1	PIEG00000000	SAMN07793295	B14	Klebsiella pneumoniae
GCA_002855855.1	PIEK00000000	SAMN07793299	D53	Klebsiella pneumoniae
GCA_002856945.1	PIDV00000000	SAMN07793282	D42	Klebsiella pneumoniae
GCA_002856915.1	PIEF00000000	SAMN07793294	B7	Klebsiella pneumoniae
GCA_002856885.1	PIEE00000000	SAMN07793293	C43	Klebsiella pneumoniae
GCA_002856905.1	PIEB00000000	SAMN07793288	C39	Klebsiella pneumoniae
GCA_002857085.1	PIDH00000000	SAMN07793267	D26	Klebsiella pneumoniae
GCA_002857065.1	PIDL00000000	SAMN07793272	D34	Klebsiella pneumoniae
GCA_002857035.1	PIDN00000000	SAMN07793274	D37	Klebsiella pneumoniae
GCA_002856995.1	PIDQ00000000	SAMN07793277	A9	Klebsiella pneumoniae
GCA_002857005.1	PIDO00000000	SAMN07793275	D38	Klebsiella pneumoniae
GCA_002856815.1	PIEM00000000	SAMN07793301	D55	Klebsiella pneumoniae
GCA_002856805.1	PIEP00000000	SAMN07793304	D64	Klebsiella pneumoniae
GCA_002856825.1	PIEL00000000	SAMN07793300	D54	Klebsiella pneumoniae
GCA_002856765.1	PIBS00000000	SAMN07793214	A3	Klebsiella pneumoniae
GCA_002856755.1	PIBW00000000	SAMN07793219	C5	Klebsiella pneumoniae
GCA_002856715.1	PIBY00000000	SAMN07793222	D3	Klebsiella pneumoniae
GCA_002856745.1	PIBT00000000	SAMN07793215	A4	Klebsiella pneumoniae
GCA_002856705.1	PIBZ00000000	SAMN07793224	D5	Klebsiella pneumoniae
GCA_002856675.1	PICU00000000	SAMN07793252	C24	Klebsiella pneumoniae
GCA_002856605.1	PICS00000000	SAMN07793250	C22	Klebsiella pneumoniae
GCA_002856525.1	PIDE00000000	SAMN07793264	C33	Klebsiella pneumoniae
GCA_002856635.1	PICN00000000	SAMN07793245	C18	Klebsiella pneumoniae
GCA_002856615.1	PICJ00000000	SAMN07793241	C14	Klebsiella pneumoniae
GCA_002856575.1	PICY00000000	SAMN07793257	C26	Klebsiella pneumoniae
GCA_002856565.1	PICZ00000000	SAMN07793258	C27	Klebsiella pneumoniae
GCA_002856535.1	PIDD00000000	SAMN07793263	C32	Klebsiella pneumoniae
GCA_002857375.1	PIBU00000000	SAMN07793216	C2	Klebsiella pneumoniae
GCA_002857235.1	PICI00000000	SAMN07793240	C13	Klebsiella pneumoniae
GCA_002857215.1	PICK00000000	SAMN07793242	C15	Klebsiella pneumoniae
GCA_002857185.1	PICL00000000	SAMN07793243	C16	Klebsiella pneumoniae
GCA_002857205.1	PICP00000000	SAMN07793247	C21	Klebsiella pneumoniae
GCA_002857115.1	PIDC00000000	SAMN07793261	C30	Klebsiella pneumoniae
GCA_002857135.1	PICQ00000000	SAMN07793248	D19	Klebsiella pneumoniae
GCA_002857125.1	PICX00000000	SAMN07793256	D25	Klebsiella pneumoniae
GCA_002857105.1	PIDF00000000	SAMN07793265	C34	Klebsiella pneumoniae
GCA_002857385.1	PIBR00000000	SAMN07793212	A1	Klebsiella pneumoniae
GCA_002861565.1	PIDW00000000	SAMN07793283	D43	Klebsiella pneumoniae
GCA_002860605.1	PICV00000000	SAMN07793253	C25	Klebsiella pneumoniae
GCA_002856665.1	PICH00000000	SAMN07793236	D16	Klebsiella quasipneumoniae
GCA_002856835.1	PIEN00000000	SAMN07793302	D59	Klebsiella quasipneumoniae
GCA_002855865.1	PIEJ00000000	SAMN07793298	D52	Klebsiella quasipneumoniae
GCA_002857265.1	PICE00000000	SAMN07793232	D13	Klebsiella quasipneumoniae
GCA_002856505.1	PIDJ00000000	SAMN07793269	D30	Klebsiella quasipneumoniae
GCA_002856485.1	PIDK00000000	SAMN07793270	D32	Klebsiella quasipneumoniae
GCA_002856365.1	PIEA00000000	SAMN07793287	C37	Klebsiella quasipneumoniae
GCA_002856275.1	PIEQ00000000	SAMN07793305	D65	Klebsiella quasipneumoniae
GCA_002856445.1	PIDP00000000	SAMN07793276	A8	Klebsiella variicola
GCA_002857295.1	PICB00000000	SAMN07793227	A5	Klebsiella variicola

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Klebsiella

Genomic study of Klebsiella in bovine

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