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Accession: PRJNA450216 ID: 450216

The Genome sequencing and assembly of Growth intervened and Genetically modified strains

The Genome sequencing and assembly of Growth intervened and Genetically modified strains
AccessionPRJNA450216
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 15-Apr-2018
West China Hospital, Sichuan University
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)7355
WGS master71
Genomic DNA20
SRA Experiments54
Protein Sequences265125
Other datasets
BioSample80
Assembly77
Assembly details:
Assembly levelNumber of Assemblies
6
70
76
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_020859485.1ContigJAJHUL000000000
SAMN22965535
020047
GCA_020859505.1ContigJAJHUM000000000
SAMN22965536
020047R
GCA_003172465.2Complete genomeSAMN08932768
WCHEC035053S1G0
GCA_003254685.1ContigQGJQ00000000
SAMN08932794
WCHEC050613C2G0M9
GCA_003172815.1ContigQGIM00000000
SAMN08932763
WCHEC025943C1G1000M9
GCA_003172765.1ContigQGIX00000000
SAMN08932774
WCHEC035053S2G1000
GCA_003172785.1ContigQGIV00000000
SAMN08932772
WCHEC035053S2G0
GCA_003172755.1ContigQGIN00000000
SAMN08932764
WCHEC025943C2G0
GCA_003172725.1ContigQGIW00000000
SAMN08932773
WCHEC035053S2G0M9
GCA_003172715.1ContigQGIY00000000
SAMN08932775
WCHEC035053S2G1000M9
GCA_003172695.1ContigQGJA00000000
SAMN08932778
WCHEC050604C1G0M9
GCA_003172635.1ContigQGIP00000000
SAMN08932766
WCHEC025943C2G1000M9
GCA_003172645.1ContigQGIL00000000
SAMN08932762
WCHEC025943C1G1000LB
GCA_003172655.1ContigQGIK00000000
SAMN08932761
WCHEC025943C1G0
GCA_003172615.1ContigQGIQ00000000
SAMN08932767
WCHEC025943C3G1000M9
GCA_003172595.1ContigQGIT00000000
SAMN08932770
WCHEC035053S1G1000
GCA_003172575.1ContigQGJB00000000
SAMN08932779
WCHEC050604C1G1000
GCA_003172555.1ContigQGIU00000000
SAMN08932771
WCHEC035053S1G1000M9
GCA_003172535.1ContigQGJC00000000
SAMN08932780
WCHEC050604C1G1000M9
GCA_003172515.1ContigQGJD00000000
SAMN08932781
WCHEC050604C2G0
GCA_003172455.1ContigQGIS00000000
SAMN08932769
WCHEC035053S1G0M9
GCA_003172475.1ContigQGIO00000000
SAMN08932765
WCHEC025943C2G1000LB
GCA_003172435.1ContigQGIZ00000000
SAMN08932777
WCHEC050604C1G0
GCA_003172405.1ContigQGJM00000000
SAMN08932790
WCHEC050613C1G0M9
GCA_003172385.1ContigQGJN00000000
SAMN08932791
WCHEC050613C1G1000
GCA_003172375.1ContigQGJO00000000
SAMN08932792
WCHEC050613C1G1000M9
GCA_003172355.1ContigQGJR00000000
SAMN08932795
WCHEC050613C2G1000
GCA_003172335.1ContigQGJS00000000
SAMN08932796
WCHEC050613C2G1000M9
GCA_003172315.1ContigQGKB00000000
SAMN08932805
WCHEC050622C1G0
GCA_003172275.1ContigQGKF00000000
SAMN08932809
WCHEC050622C2G0
GCA_003172225.1ContigQGJF00000000
SAMN08932783
WCHEC050604C2G1000
GCA_003172235.1ContigQGKG00000000
SAMN08932810
WCHEC050622C2G0M9
GCA_003172215.1ContigQGJE00000000
SAMN08932782
WCHEC050604C2G0M9
GCA_003172195.1ContigQGJG00000000
SAMN08932784
WCHEC050604C2G1000M9
GCA_003172145.1ContigQGJJ00000000
SAMN08932787
WCHEC050604C4G0
GCA_003172155.1ContigQGJH00000000
SAMN08932785
WCHEC050604C3G0
GCA_003172135.1ContigQGJI00000000
SAMN08932786
WCHEC050604C3G1000
GCA_003172115.1ContigQGJK00000000
SAMN08932788
WCHEC050604C4G1000
GCA_003172085.1ContigQGJP00000000
SAMN08932793
WCHEC050613C2G0
GCA_003172065.1ContigQGJL00000000
SAMN08932789
WCHEC050613C1G0
GCA_003172055.1ContigQGJT00000000
SAMN08932797
WCHEC050618C1G0
GCA_003172035.1ContigQGJU00000000
SAMN08932798
WCHEC050618C1G0M9
GCA_003171985.1ContigQGJW00000000
SAMN08932800
WCHEC050618C1G1000M9
GCA_003171975.1ContigQGJX00000000
SAMN08932801
WCHEC050618C2G0
GCA_003171995.1ContigQGJV00000000
SAMN08932799
WCHEC050618C1G1000
GCA_003171955.1ContigQGJY00000000
SAMN08932802
WCHEC050618C2G0M9
GCA_003171905.1ContigQGKE00000000
SAMN08932808
WCHEC050622C1G1000M9
GCA_003171935.1ContigQGJZ00000000
SAMN08932803
WCHEC050618C2G1000
GCA_003171895.1ContigQGKA00000000
SAMN08932804
WCHEC050618C2G1000M9
GCA_003171875.1ContigQGKH00000000
SAMN08932811
WCHEC050622C2G1000
GCA_003171835.1ContigQGKC00000000
SAMN08932806
WCHEC050622C1G0M9
GCA_003171845.1ContigQGKI00000000
SAMN08932812
WCHEC050622C2G1000M9
GCA_020181535.1Complete genomeSAMN21545971
035053C1pKPC2_Vir_090515B1
GCA_022359975.1ContigJAKSEL000000000
SAMN25987977
035166R
GCA_013504715.1ContigJACCKG000000000
SAMN15487119
005008R1
GCA_013520875.1ContigJACCKF000000000
SAMN15487120
005008R2
GCA_013520915.1ContigJACCKE000000000
SAMN15487121
005008X1B2T2
GCA_037329525.1Complete genomeSAMN40411204
130120D
GCA_046196575.1Complete genomeSAMN45224508
015710-delta-acyT
GCA_046196535.1Complete genomeSAMN45224489
015710-delta-pyt
GCA_046254915.1Complete genomeSAMN45224509
015710-delta-acyT-delta-pyt
GCA_034554995.1ContigJAXUDS000000000
SAMN38816129
130124
GCA_034554955.1ContigJAXUDT000000000
SAMN38816128
130122
GCA_034554935.1ContigJAXUDR000000000
SAMN38816130
130126
GCA_037547195.1ContigJBBIWT000000000
SAMN40550606
130119X8B1
GCA_037547155.1ContigJBBIWS000000000
SAMN40550607
130119X6B2
GCA_037547095.1ContigJBBIWR000000000
SAMN40550608
130119X9B1
GCA_037547015.1ContigJBBIWP000000000
SAMN40550610
130119X7B1
GCA_037546995.1ContigJBBIWN000000000
SAMN40550612
130120X6B2
GCA_037546895.1ContigJBBIWO000000000
SAMN40550611
130120X8B1
GCA_037546915.1ContigJBBIWM000000000
SAMN40550613
130120X7B2
GCA_037546905.1ContigJBBIWQ000000000
SAMN40550609
130119X10B1
GCA_037572795.1ContigJBBIWL000000000
SAMN40550614
130120X9B1
GCA_037203585.1ContigJBBDGY000000000
SAMN40410508
130119D
GCA_037203555.1ContigJBBDGX000000000
SAMN40410509
130119deltaKPC
GCA_037203545.1ContigJBBDGW000000000
SAMN40410510
130120deltaKPC
SRA Data Details
ParameterValue
Data volume, Gbases97
Data volume, Mbytes35544

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