Escherichia (ID 432505) - BioProject

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Accession: PRJNA432505 ID: 432505

Escherichia

Sequencing, assembly and annotation of naturalized E. coli isolates from Lake Superior Watersheds

See Genome Information for Escherichia coli

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9339 additional projects are related by organism.

This project aimed to sequence and phenotype the SC collection of strains isolated by Ishii et al. More...

Accession	PRJNA432505
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Escherichia[Taxonomy ID: 561] Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Grants	"Integrated Modeling of the Evolution of Genotypes and Phenotypes in Bacteria" (Grant ID 31003A_135397, Swiss National Science Foundation)
Submission	Registration date: 3-Aug-2018 University of Basel
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	13962
WGS master	91
Protein Sequences	411919
Other datasets
BioSample	91
Assembly	91

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

84
7
91

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_003358415.1	QONP00000000	SAMN08462955	SC343	Escherichia coli
GCA_003358835.1	QOOH00000000	SAMN08462937	SC320	Escherichia coli
GCA_003358845.1	QOOI00000000	SAMN08462936	SC319	Escherichia coli
GCA_003358795.1	QOOJ00000000	SAMN08462935	SC318	Escherichia coli
GCA_003358805.1	QOOK00000000	SAMN08462934	SC316	Escherichia coli
GCA_003358715.1	QOOE00000000	SAMN08462940	SC328	Escherichia coli
GCA_003358725.1	QOOF00000000	SAMN08462939	SC327	Escherichia coli
GCA_003358695.1	QOOA00000000	SAMN08462944	SC332	Escherichia coli
GCA_003358605.1	QONY00000000	SAMN08462946	SC334	Escherichia coli
GCA_003358625.1	QONZ00000000	SAMN08462945	SC333	Escherichia coli
GCA_003358575.1	QONX00000000	SAMN08462947	SC335	Escherichia coli
GCA_003358565.1	QONW00000000	SAMN08462948	SC336	Escherichia coli
GCA_003358525.1	QONU00000000	SAMN08462950	SC338	Escherichia coli
GCA_003358505.1	QONS00000000	SAMN08462952	SC340	Escherichia coli
GCA_003358485.1	QONT00000000	SAMN08462951	SC339	Escherichia coli
GCA_003358995.1	QOOR00000000	SAMN08462927	SC303	Escherichia coli
GCA_003358975.1	QOOQ00000000	SAMN08462928	SC305	Escherichia coli
GCA_003358945.1	QOON00000000	SAMN08462931	SC312	Escherichia coli
GCA_003358935.1	QOOL00000000	SAMN08462933	SC314	Escherichia coli
GCA_003358915.1	QOOP00000000	SAMN08462929	SC307	Escherichia coli
GCA_003358895.1	QOOM00000000	SAMN08462932	SC313	Escherichia coli
GCA_003358875.1	QOOO00000000	SAMN08462930	SC309	Escherichia coli
GCA_003358355.1	QONL00000000	SAMN08462959	SC347	Escherichia coli
GCA_003358335.1	QONM00000000	SAMN08462958	SC346	Escherichia coli
GCA_003358325.1	QONK00000000	SAMN08462960	SC348	Escherichia coli
GCA_003358305.1	QONJ00000000	SAMN08462961	SC349	Escherichia coli
GCA_003358265.1	QONF00000000	SAMN08462965	SC353	Escherichia coli
GCA_003358255.1	QONI00000000	SAMN08462962	SC350	Escherichia coli
GCA_003358245.1	QONG00000000	SAMN08462964	SC352	Escherichia coli
GCA_003358225.1	QONH00000000	SAMN08462963	SC351	Escherichia coli
GCA_003358185.1	QONC00000000	SAMN08462968	SC356	Escherichia coli
GCA_003358175.1	QOND00000000	SAMN08462967	SC355	Escherichia coli
GCA_003358165.1	QONB00000000	SAMN08462969	SC357	Escherichia coli
GCA_003358145.1	QONE00000000	SAMN08462966	SC354	Escherichia coli
GCA_003358115.1	QONA00000000	SAMN08462970	SC358	Escherichia coli
GCA_003358095.1	QOMY00000000	SAMN08462972	SC360	Escherichia coli
GCA_003358085.1	QOMZ00000000	SAMN08462971	SC359	Escherichia coli
GCA_003358035.1	QOMW00000000	SAMN08462974	SC362	Escherichia coli
GCA_003358025.1	QOMX00000000	SAMN08462973	SC361	Escherichia coli
GCA_003357995.1	QOMV00000000	SAMN08462975	SC363	Escherichia coli
GCA_003357985.1	QOMU00000000	SAMN08462976	SC364	Escherichia coli
GCA_003357965.1	QOMT00000000	SAMN08462977	SC365	Escherichia coli
GCA_003357945.1	QOMS00000000	SAMN08462978	SC366	Escherichia coli
GCA_003357905.1	QOMQ00000000	SAMN08462980	SC368	Escherichia coli
GCA_003357915.1	QOMR00000000	SAMN08462979	SC367	Escherichia coli
GCA_003357885.1	QOMP00000000	SAMN08462981	SC369	Escherichia coli
GCA_003357865.1	QOMO00000000	SAMN08462982	SC370	Escherichia coli
GCA_003357845.1	QOMN00000000	SAMN08462983	SC371	Escherichia coli
GCA_003357825.1	QOMM00000000	SAMN08462984	SC372	Escherichia coli
GCA_003357805.1	QOML00000000	SAMN08462985	SC373	Escherichia coli
GCA_003357785.1	QOMK00000000	SAMN08462986	SC374	Escherichia coli
GCA_003357765.1	QOMJ00000000	SAMN08462987	SC375	Escherichia coli
GCA_003357745.1	QOMI00000000	SAMN08462988	SC376	Escherichia coli
GCA_003357725.1	QOMH00000000	SAMN08462989	SC377	Escherichia coli
GCA_003357705.1	QOMG00000000	SAMN08462990	SC378	Escherichia coli
GCA_003357685.1	QOMF00000000	SAMN08462991	SC379	Escherichia coli
GCA_003357665.1	QOME00000000	SAMN08462992	SC380	Escherichia coli
GCA_003357645.1	QOMD00000000	SAMN08462993	SC381	Escherichia coli
GCA_003357615.1	QOMC00000000	SAMN08462994	SC382	Escherichia coli
GCA_003357605.1	QOMA00000000	SAMN08462996	SC384	Escherichia coli
GCA_003357585.1	QOMB00000000	SAMN08462995	SC383	Escherichia coli
GCA_003357565.1	QOLZ00000000	SAMN08462997	SC385	Escherichia coli
GCA_003357545.1	QOLY00000000	SAMN08462998	SC386	Escherichia coli
GCA_003357525.1	QOLX00000000	SAMN08462999	SC387	Escherichia coli
GCA_003357505.1	QOLW00000000	SAMN08463000	SC388	Escherichia coli
GCA_003357475.1	QOLV00000000	SAMN08463001	SC389	Escherichia coli
GCA_003357465.1	QOLU00000000	SAMN08463002	SC390	Escherichia coli
GCA_003357435.1	QOLT00000000	SAMN08463003	SC391	Escherichia coli
GCA_003357425.1	QOLS00000000	SAMN08463004	SC392	Escherichia coli
GCA_003357405.1	QOLR00000000	SAMN08463005	SC393	Escherichia coli
GCA_003357385.1	QOLQ00000000	SAMN08463006	SC394	Escherichia coli
GCA_003357365.1	QOLP00000000	SAMN08463007	SC395	Escherichia coli
GCA_003357345.1	QOLO00000000	SAMN08463008	SC396	Escherichia coli
GCA_003357325.1	QOLN00000000	SAMN08463009	SC397	Escherichia coli
GCA_003357295.1	QOLM00000000	SAMN08463010	SC398	Escherichia coli
GCA_003357285.1	QOLL00000000	SAMN08463011	SC399	Escherichia coli
GCA_003357255.1	QOLK00000000	SAMN08463012	SC400	Escherichia coli
GCA_003357225.1	QOLJ00000000	SAMN08463013	SC401	Escherichia coli
GCA_003357245.1	QOLI00000000	SAMN08463014	SC402	Escherichia coli
GCA_003357195.1	QOLG00000000	SAMN08463016	SC404	Escherichia coli
GCA_003357185.1	QOLH00000000	SAMN08463015	SC403	Escherichia coli
GCA_003357165.1	QOLF00000000	SAMN08463017	SC405	Escherichia coli
GCA_003358465.1	QONR00000000	SAMN08462953	SC341	Escherichia marmotae
GCA_003358435.1	QONQ00000000	SAMN08462954	SC342	Escherichia marmotae
GCA_003358535.1	QONV00000000	SAMN08462949	SC337	Escherichia marmotae
GCA_003358645.1	QOOB00000000	SAMN08462943	SC331	Escherichia marmotae
GCA_003358665.1	QOOD00000000	SAMN08462941	SC329	Escherichia marmotae
GCA_003358775.1	QOOC00000000	SAMN08462942	SC330	Escherichia marmotae
GCA_003358755.1	QOOG00000000	SAMN08462938	SC326	Escherichia marmotae
GCA_003358405.1	QONO00000000	SAMN08462956	SC344	Escherichia marmotae
GCA_003358385.1	QONN00000000	SAMN08462957	SC345	Escherichia marmotae

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Escherichia

Sequencing, assembly and annotation of naturalized E. coli isolates from Lake Superior Watersheds

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