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Links from Nucleotide

Accession: PRJNA479435 ID: 479435

Escherichia coli

E. coli-carriage

See Genome Information for Escherichia coli
Host factors and bacterial genetic determinant characterization to decipher the E. coli ST131 C1-M27 cluster emergence in a prospective community pediatric cohort study.
AccessionPRJNA479435
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismEscherichia coli[Taxonomy ID: 562]
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
SubmissionRegistration date: 24-Aug-2018
inserm
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)7571
WGS master35
Other datasets
BioSample35
Assembly35
Assembly details:
Assembly levelNumber of Assemblies
20
15
35
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_003428095.1ScaffoldQNSO00000000SAMN09537392
L49
GCA_003427915.1ScaffoldQNSR00000000SAMN09537395
L62
GCA_003428115.1ContigQNSH00000000SAMN09537385
L14
GCA_003428105.1ScaffoldQNSN00000000SAMN09537391
L41
GCA_003428045.1ScaffoldQNSI00000000SAMN09537386
L24
GCA_003428055.1ContigQNSP00000000SAMN09537393
L58
GCA_003427995.1ScaffoldQNSL00000000SAMN09537389
L36
GCA_003428005.1ContigQNSK00000000SAMN09537388
L31
GCA_003427895.1ScaffoldQNSS00000000SAMN09537396
L64
GCA_003427965.1ScaffoldQNSM00000000SAMN09537390
L39
GCA_003427945.1ContigQNSQ00000000SAMN09537394
L60
GCA_003427885.1ContigQNST00000000SAMN09537397
L70
GCA_003427875.1ScaffoldQNSV00000000SAMN09537399
L102
GCA_003428035.1ScaffoldQNSJ00000000SAMN09537387
L25
GCA_003427835.1ContigQNSW00000000SAMN09537400
L106
GCA_003427805.1ContigQNSZ00000000SAMN09537403
L114
GCA_003427815.1ScaffoldQNSY00000000SAMN09537402
L111
GCA_003427795.1ScaffoldQNTB00000000SAMN09537405
L136
GCA_003427725.1ScaffoldQNTE00000000SAMN09537408
L148
GCA_003427775.1ContigQNTC00000000SAMN09537406
L140
GCA_003427715.1ContigQNTF00000000SAMN09537409
L149
GCA_003427735.1ContigQNTD00000000SAMN09537407
L146
GCA_003427575.1ScaffoldQNSX00000000SAMN09537401
L110
GCA_003427695.1ContigQNTG00000000SAMN09537410
L150
GCA_003427675.1ContigQNTH00000000SAMN09537411
L155
GCA_003427645.1ScaffoldQNTK00000000SAMN09537414
L168
GCA_003427625.1ScaffoldQNTP00000000SAMN09537419
L176
GCA_003427585.1ScaffoldQNSU00000000SAMN09537398
L89
GCA_003427515.1ContigQNTJ00000000SAMN09537413
L166
GCA_003427525.1ContigQNTI00000000SAMN09537412
L162
GCA_003427505.1ContigQNTL00000000SAMN09537415
L169
GCA_003427565.1ScaffoldQNTA00000000SAMN09537404
L134
GCA_003427445.1ScaffoldQNTN00000000SAMN09537417
L173
GCA_003427455.1ScaffoldQNTO00000000SAMN09537418
L175
GCA_003427435.1ScaffoldQNTM00000000SAMN09537416
L172

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