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Links from Nucleotide

Accession: PRJNA491195 ID: 491195

Salmonella enterica subsp. enterica

Salmonella Lubbock characterization

See Genome Information for Salmonella enterica
Comparison of the genomic characteristics of S. Lubbock with its ancestors S. Montevideo and S. Mbandaka
AccessionPRJNA491195
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismSalmonella enterica subsp. enterica[Taxonomy ID: 59201]
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica
SubmissionRegistration date: 24-Sep-2018
Texas Tech University
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)9599
WGS master68
SRA Experiments2
Protein Sequences317719
Other datasets
BioSample68
Assembly68
Assembly details:
Assembly levelNumber of Assemblies
53
15
68
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_003597515.1ScaffoldQYWK00000000SAMN10065320
11TTU1942b
GCA_003591845.1ScaffoldQYVM00000000SAMN10065296
10TTU382b
GCA_003591805.1ScaffoldQYVO00000000SAMN10065298
10TTU405x
GCA_003591795.1ScaffoldQYVS00000000SAMN10065302
10TTU97B
GCA_003591785.1ScaffoldQYVT00000000SAMN10065303
11TTU100TT
GCA_003591745.1ScaffoldQYVY00000000SAMN10065308
11TTU1462b
GCA_003591735.1ScaffoldQYWD00000000SAMN10065313
11TTU1615b
GCA_003591725.1ScaffoldQYVV00000000SAMN10065305
11TTU1216b
GCA_003597535.1ContigQYWF00000000SAMN10065315
11TTU1640b
GCA_003597465.1ScaffoldQYWV00000000SAMN10065331
11TTUT189TT
GCA_003597455.1ScaffoldQYWW00000000SAMN10065332
11TTUT315TT
GCA_003597475.1ContigQYWO00000000SAMN10065324
11TTU27TT
GCA_003597425.1ScaffoldQYWY00000000SAMN10065334
11TTUT442TT
GCA_003597365.1ScaffoldQYWZ00000000SAMN10065335
11TTUT471TT
GCA_003597345.1ScaffoldQYXD00000000SAMN10065339
11TTUT967TT
GCA_003597315.1ScaffoldQYXJ00000000SAMN10065345
12TTU07-4-22-1
GCA_003597305.1ScaffoldQYXI00000000SAMN10065344
12TTU07-4-21-1
GCA_003597285.1ScaffoldQYXK00000000SAMN10065346
12TTU07-4-38-1
GCA_003597255.1ScaffoldQYXN00000000SAMN10065349
12TTU07-4-50-1
GCA_003597245.1ScaffoldQYXL00000000SAMN10065347
12TTU07-4-42-1
GCA_003597205.1ScaffoldQYXP00000000SAMN10065351
12TTU08-4-60-2
GCA_003597185.1ContigQYXT00000000SAMN10065355
12TTU11-2-41-1
GCA_003597165.1ScaffoldQYXU00000000SAMN10065356
12TTU11-2-7-2
GCA_003597145.1ScaffoldQYXY00000000SAMN10065360
12TTU13-1-65-1
GCA_003597105.1ScaffoldQYVX00000000SAMN10065307
11TTU1318
GCA_003597075.1ContigQYWA00000000SAMN10065310
11TTU1551b
GCA_003597065.1ScaffoldQYVZ00000000SAMN10065309
11TTU1467B
GCA_003597045.1ScaffoldQYWB00000000SAMN10065311
11TTU1557b
GCA_003597005.1ContigQYWE00000000SAMN10065314
11TTU1622b
GCA_003597015.1ContigQYWC00000000SAMN10065312
11TTU1570x
GCA_003596985.1ScaffoldQYWG00000000SAMN10065316
11TTU1689x
GCA_003596965.1ScaffoldQYWH00000000SAMN10065317
11TTU1811x
GCA_003596945.1ContigQYWI00000000SAMN10065318
11TTU1814b
GCA_003596925.1ScaffoldQYWL00000000SAMN10065321
11TTU2168x
GCA_003596905.1ScaffoldQYWM00000000SAMN10065322
11TTU2363b
GCA_003596885.1ScaffoldQYWP00000000SAMN10065325
11TTU55TT
GCA_003596865.1ScaffoldQYWN00000000SAMN10065323
11TTU2744b
GCA_003596845.1ScaffoldQYWQ00000000SAMN10065326
11TTU61TT
GCA_003596815.1ScaffoldQYWR00000000SAMN10065327
11TTU81TT
GCA_003596805.1ScaffoldQYWS00000000SAMN10065328
11TTU977b
GCA_003596785.1ScaffoldQYWT00000000SAMN10065329
11TTUC046
GCA_003596755.1ScaffoldQYWU00000000SAMN10065330
11TTUC054
GCA_003596745.1ScaffoldQYWX00000000SAMN10065333
11TTUT388RV
GCA_003596725.1ScaffoldQYXA00000000SAMN10065336
11TTUT490TT
GCA_003596695.1ScaffoldQYXB00000000SAMN10065337
11TTUT642TT
GCA_003596685.1ScaffoldQYXC00000000SAMN10065338
11TTUT645TT
GCA_003596665.1ScaffoldQYXE00000000SAMN10065340
12TTU01-1-31-1
GCA_003596635.1ScaffoldQYXF00000000SAMN10065341
12TTU01-1-64-1
GCA_003596625.1ScaffoldQYXG00000000SAMN10065342
12TTU02-10-31-1
GCA_003596605.1ContigQYXH00000000SAMN10065343
12TTU04-05-2-54-1
GCA_003596565.1ScaffoldQYXM00000000SAMN10065348
12TTU07-4-46-1
GCA_003596575.1ScaffoldQYXO00000000SAMN10065350
12TTU08-4-55-1
GCA_003596545.1ScaffoldQYXQ00000000SAMN10065352
12TTU09-4-54E-3
GCA_003596515.1ScaffoldQYXR00000000SAMN10065353
12TTU10-06-4-75E-1
GCA_003596505.1ScaffoldQYXS00000000SAMN10065354
12TTU11-2-24-1
GCA_003596485.1ScaffoldQYXV00000000SAMN10065357
12TTU13-1-28-1
GCA_003596465.1ScaffoldQYXW00000000SAMN10065358
12TTU13-1-54-3
GCA_003596445.1ScaffoldQYXX00000000SAMN10065359
12TTU13-1-64-1
GCA_003596425.1ContigQYXZ00000000SAMN10065361
12TTUMesnonTIF8x1
GCA_003676315.1ContigQYWJ00000000SAMN10065319
11TTU1837b
GCA_003676295.1ScaffoldQYVW00000000SAMN10065306
11TTU1258b
GCA_003676265.1ContigQYVU00000000SAMN10065304
11TTU1110x
GCA_003676255.1ScaffoldQYVR00000000SAMN10065301
10TTU89b1
GCA_003591125.1ScaffoldQYVN00000000SAMN10065297
10TTU401B
GCA_003591105.1ContigQYVK00000000SAMN10065294
10TTU271b
GCA_003591095.1ContigQYVL00000000SAMN10065295
10TTU284x
GCA_003591065.1ContigQYVQ00000000SAMN10065300
10TTU494b
GCA_003591055.1ContigQYVP00000000SAMN10065299
10TTU450x
SRA Data Details
ParameterValue
Data volume, Gbases1
Data volume, Mbytes490

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