Clostridioides difficile (ID 504639) - BioProject

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Accession: PRJNA504639 ID: 504639

Clostridioides difficile

Clostridioides difficile Genome sequencing and assembly

See Genome Information for Clostridioides difficile

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744 additional projects are related by organism.

Use of Whole Genome sequencing to Guide a Clostridium difficile Diagnostic stewardship program

Accession	PRJNA504639
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Clostridioides difficile[Taxonomy ID: 1496] Bacteria; Bacillati; Bacillota; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Clostridioides; Clostridioides difficile
Submission	Registration date: 4-Dec-2018 WRAIR
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	5380
WGS master	42
Protein Sequences	156846
Other datasets
BioSample	42
Assembly	42

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

42
42

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_003862635.1	RRAT00000000	SAMN10406235	17-279-09915	Clostridioides difficile
GCA_003862595.1	RRAW00000000	SAMN10406238	17-314-01071	Clostridioides difficile
GCA_003862575.1	RRAY00000000	SAMN10406240	17-305-09913	Clostridioides difficile
GCA_003862565.1	RRAX00000000	SAMN10406239	17-295-07069	Clostridioides difficile
GCA_003863255.1	RQZY00000000	SAMN10406214	17-220-06564	Clostridioides difficile
GCA_003863305.1	RQZP00000000	SAMN10406205	17-072-06210	Clostridioides difficile
GCA_003863265.1	RQZU00000000	SAMN10406210	17-083-08476	Clostridioides difficile
GCA_003863275.1	RQZS00000000	SAMN10406208	17-083-09678	Clostridioides difficile
GCA_003863155.1	RRAN00000000	SAMN10406229	17-267-04463	Clostridioides difficile
GCA_003863195.1	RRAK00000000	SAMN10406226	17-260-05232	Clostridioides difficile
GCA_003863235.1	RRAB00000000	SAMN10406217	17-241-03216	Clostridioides difficile
GCA_003863205.1	RRAD00000000	SAMN10406219	17-239-06812	Clostridioides difficile
GCA_003863145.1	RRAV00000000	SAMN10406237	17-313-12749	Clostridioides difficile
GCA_003863135.1	RRAR00000000	SAMN10406233	17-265-08880	Clostridioides difficile
GCA_003863105.1	RQZJ00000000	SAMN10406199	16-337-06669	Clostridioides difficile
GCA_003863055.1	RRAU00000000	SAMN10406236	17-283-08672	Clostridioides difficile
GCA_003863045.1	RQZQ00000000	SAMN10406206	17-051-10330	Clostridioides difficile
GCA_003863075.1	RQZO00000000	SAMN10406204	16-349-01063	Clostridioides difficile
GCA_003862975.1	RQZV00000000	SAMN10406211	17-203-08843	Clostridioides difficile
GCA_003863005.1	RQZT00000000	SAMN10406209	17-098-0692	Clostridioides difficile
GCA_003863035.1	RQZR00000000	SAMN10406207	17-067-13322	Clostridioides difficile
GCA_003862945.1	RQZX00000000	SAMN10406213	17-216-04337	Clostridioides difficile
GCA_003862965.1	RQZW00000000	SAMN10406212	17-218-01102	Clostridioides difficile
GCA_003862935.1	RQZZ00000000	SAMN10406215	17-226-09131	Clostridioides difficile
GCA_003862895.1	RRAC00000000	SAMN10406218	17-241-11331	Clostridioides difficile
GCA_003862885.1	RRAA00000000	SAMN10406216	17-226-02158	Clostridioides difficile
GCA_003862865.1	RRAF00000000	SAMN10406221	17-245-01183	Clostridioides difficile
GCA_003862835.1	RRAG00000000	SAMN10406222	17-246-05417	Clostridioides difficile
GCA_003862855.1	RRAE00000000	SAMN10406220	17-223-04457	Clostridioides difficile
GCA_003862765.1	RRAJ00000000	SAMN10406225	17-258-00877	Clostridioides difficile
GCA_003862815.1	RRAH00000000	SAMN10406223	17-253-03713	Clostridioides difficile
GCA_003862785.1	RRAI00000000	SAMN10406224	17-250-06287	Clostridioides difficile
GCA_003862755.1	RRAL00000000	SAMN10406227	17-255-03486	Clostridioides difficile
GCA_003862735.1	RRAM00000000	SAMN10406228	17-267-03811	Clostridioides difficile
GCA_003862705.1	RRAO00000000	SAMN10406230	17-269-03033	Clostridioides difficile
GCA_003862685.1	RRAP00000000	SAMN10406231	17-268-09541	Clostridioides difficile
GCA_003862665.1	RRAQ00000000	SAMN10406232	17-265-05718	Clostridioides difficile
GCA_003862655.1	RRAS00000000	SAMN10406234	17-278-08330	Clostridioides difficile
GCA_003932695.1	RQZK00000000	SAMN10406200	16-339-08888	Clostridioides difficile
GCA_003932675.1	RQZN00000000	SAMN10406203	16-347-07886	Clostridioides difficile
GCA_003932635.1	RQZM00000000	SAMN10406202	16-349-12971	Clostridioides difficile
GCA_003932645.1	RQZL00000000	SAMN10406201	16-342-13560	Clostridioides difficile

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Clostridioides difficile

Clostridioides difficile Genome sequencing and assembly

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