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Links from Nucleotide

Accession: PRJNA472583 ID: 472583

Enterobacteriaceae

WWTP CRE WGS data

CRE recovered from wastewater treatment plant effluent and nearby surface waters in the US
AccessionPRJNA472583
Data TypeGenome sequencing and assembly
ScopeMultispecies
Publications
  • Published online: Mathys D et al., "Carbapenemase-producing Enterobacteriaceae and Aeromonas spp. present in wastewater treatment plant effluent and nearby surface waters in the US", PLOS ONE, 2019;14(6)
SubmissionRegistration date: 22-May-2018
The Ohio State University
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)6306
WGS master30
Protein Sequences156252
Other datasets
BioSample30
Assembly30
Assembly details:
Assembly levelNumber of Assemblies
24
6
30
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_004024495.1ContigQKOS00000000SAMN09289756
GEO_48_Eff_A
GCA_004024475.1ScaffoldQKOU00000000SAMN09289754
GEO_47_Up_A
GCA_004024325.1ScaffoldQKPH00000000SAMN09289741
GEO_23_Down_B
GCA_004024185.1ScaffoldQKPA00000000SAMN09289748
GEO_37_Down_A
GCA_004024195.1ScaffoldQKOZ00000000SAMN09289749
GEO_39_Eff_A
GCA_004024405.1ContigQKPL00000000SAMN09289737
GEO_16_Eff_A
GCA_004024365.1ScaffoldQKPJ00000000SAMN09289739
GEO_21_Eff_A
GCA_004023995.1ScaffoldQKOR00000000SAMN09289757
GEO_48_Eff_C
GCA_004024095.1ScaffoldQKOV00000000SAMN09289753
GEO_47_Eff_B
GCA_004024005.1ContigQKON00000000SAMN09289761
GEO_49_Eff_B
GCA_004024525.1ScaffoldQKPC00000000SAMN09289746
GEO_33_Eff_A
GCA_004024425.1ScaffoldQKOL00000000SAMN09289763
GEO_49_Up_B
GCA_004024455.1ContigQKOM00000000SAMN09289762
GEO_49_Up_A
GCA_004024145.1ContigQKOY00000000SAMN09289750
GEO_45_Down_A
GCA_004024335.1ScaffoldQKPI00000000SAMN09289740
GEO_23_Down_A
GCA_004024265.1ScaffoldQKPE00000000SAMN09289744
GEO_30_Eff_A
GCA_004126455.1ScaffoldQJSL00000000SAMN09288744
GEO_4_Eff_A
GCA_004024025.1ScaffoldQKOO00000000SAMN09289760
GEO_49_Eff_A
GCA_004024105.1ScaffoldQKOW00000000SAMN09289752
GEO_47_Eff_A
GCA_004024375.1ScaffoldQKPK00000000SAMN09289738
GEO_20_Down_C
GCA_004024205.1ScaffoldQKPB00000000SAMN09289747
GEO_33_Up_A
GCA_004024445.1ScaffoldQKOQ00000000SAMN09289758
GEO_49_Down_A
GCA_004024285.1ScaffoldQKPG00000000SAMN09289742
GEO_28_Down_A
GCA_004024015.1ScaffoldQKOP00000000SAMN09289759
GEO_49_Down_B
GCA_004023985.1ScaffoldQKOK00000000SAMN09289764
GEO_49_Up_C
GCA_004024245.1ScaffoldQKPD00000000SAMN09289745
GEO_33_Down_A
GCA_004024275.1ScaffoldQKPF00000000SAMN09289743
GEO_28_Up_A
GCA_004024535.1ContigQKPM00000000SAMN09289736
GEO_6_Down_B
GCA_004024085.1ScaffoldQKOT00000000SAMN09289755
GEO_48_Down_B
GCA_004024155.1ScaffoldQKOX00000000SAMN09289751
GEO_47_Down_B

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