U.S. flag

An official website of the United States government

Display Settings:

Format

Send to:

Choose Destination

Links from Nucleotide

Accession: PRJEB3035 ID: 204751

Clostridium_difficile_toxin_A__B__ribotype_017_global_population_structure

http://www.sanger.ac.uk/resources/downloads/bacteria/clostridium-difficile.html This data is part of a pre-publication release. More...
AccessionPRJEB3035
Data TypeGenome sequencing and assembly
ScopeMonoisolate
SubmissionRegistration date: 21-May-2013
Wellcome Sanger Institute
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)7414
WGS master94
SRA Experiments289
Protein Sequences356029
Other datasets
BioSample287
Assembly94
Assembly details:
Assembly levelNumber of Assemblies
Scaffold Scaffold
Contig Contig
Total
17
77
94
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_901006475.1ContigCAAKCM000000000SAMEA1531879
LSHTM-9
Clostridioides difficile
GCA_901006445.1ContigCAAKCI000000000SAMEA1531833
LSHTM-95
Clostridioides difficile
GCA_901006435.1ContigCAAKCJ000000000SAMEA1531865
LSHTM-96
Clostridioides difficile
GCA_901006385.1ContigCAAKCD000000000SAMEA1531830
LSHTM-91
Clostridioides difficile
GCA_901006375.1ContigCAAKCB000000000SAMEA1531855
LSHTM-8
Clostridioides difficile
GCA_901006365.1ContigCAAKCC000000000SAMEA1531862
LSHTM-89
Clostridioides difficile
GCA_901006355.1ContigCAAKBZ000000000SAMEA1531910
LSHTM-87
Clostridioides difficile
GCA_901006345.1ContigCAAKCA000000000SAMEA1531882
LSHTM-88
Clostridioides difficile
GCA_901006335.1ContigCAAKBW000000000SAMEA1531870
LSHTM-75
Clostridioides difficile
GCA_901006325.1ScaffoldCAAKBY000000000SAMEA1531905
LSHTM-81
Clostridioides difficile
GCA_901006315.1ContigCAAKBX000000000SAMEA1531854
LSHTM-85
Clostridioides difficile
GCA_901006305.1ContigCAAKBV000000000SAMEA1531869
LSHTM-83
Clostridioides difficile
GCA_901006295.1ContigCAAKBU000000000SAMEA1531901
LSHTM-77
Clostridioides difficile
GCA_901006285.1ContigCAAKBQ000000000SAMEA1531915
LSHTM-76
Clostridioides difficile
GCA_901006275.1ContigCAAKBT000000000SAMEA1531859
LSHTM-74
Clostridioides difficile
GCA_901006265.1ContigCAAKBS000000000SAMEA1531874
LSHTM-73
Clostridioides difficile
GCA_901006255.1ContigCAAKBN000000000SAMEA1531860
LSHTM-78
Clostridioides difficile
GCA_901006245.1ContigCAAKBO000000000SAMEA1531843
LSHTM-80
Clostridioides difficile
GCA_901006235.1ContigCAAKBP000000000SAMEA1531835
LSHTM-68
Clostridioides difficile
GCA_901006225.1ScaffoldCAAKBR000000000SAMEA1531858
LSHTM-70
Clostridioides difficile
GCA_901006215.1ContigCAAKBL000000000SAMEA1531825
LSHTM-6
Clostridioides difficile
GCA_901006425.1ContigCAAKCH000000000SAMEA1531829
LSHTM-94
Clostridioides difficile
GCA_901006415.1ContigCAAKCE000000000SAMEA1531868
LSHTM-92
Clostridioides difficile
GCA_901006405.1ContigCAAKCF000000000SAMEA1531881
LSHTM-93
Clostridioides difficile
GCA_901006395.1ContigCAAKCG000000000SAMEA1531844
LSHTM-90
Clostridioides difficile
GCA_901006205.1ContigCAAKBM000000000SAMEA1531850
LSHTM-71
Clostridioides difficile
GCA_901006195.1ContigCAAKBJ000000000SAMEA1531884
LSHTM-65
Clostridioides difficile
GCA_901006185.1ContigCAAKBK000000000SAMEA1531914
LSHTM-66
Clostridioides difficile
GCA_901006175.1ContigCAAKBG000000000SAMEA1531907
LSHTM-5
Clostridioides difficile
GCA_901006165.1ContigCAAKBH000000000SAMEA1531846
LSHTM-64
Clostridioides difficile
GCA_901006155.1ScaffoldCAAKBI000000000SAMEA1531852
LSHTM-55
Clostridioides difficile
GCA_901006145.1ScaffoldCAAKBF000000000SAMEA1531906
LSHTM-56
Clostridioides difficile
GCA_901006135.1ContigCAAKBC000000000SAMEA1531826
LSHTM-53
Clostridioides difficile
GCA_901006125.1ContigCAAKBD000000000SAMEA1531836
LSHTM-51
Clostridioides difficile
GCA_901006115.1ContigCAAKBB000000000SAMEA1531909
LSHTM-52
Clostridioides difficile
GCA_901006105.1ContigCAAKAY000000000SAMEA1531887
LSHTM-44
Clostridioides difficile
GCA_901006095.1ScaffoldCAAKBE000000000SAMEA1531849
LSHTM-45
Clostridioides difficile
GCA_901006075.1ContigCAAKAV000000000SAMEA1531873
LSHTM-47
Clostridioides difficile
GCA_901006065.1ContigCAAKBA000000000SAMEA1531875
LSHTM-43
Clostridioides difficile
GCA_901006085.1ContigCAAKAW000000000SAMEA1531892
LSHTM-48
Clostridioides difficile
GCA_901006045.1ContigCAAKAU000000000SAMEA1531911
LSHTM-42
Clostridioides difficile
GCA_901006015.1ContigCAAKAX000000000SAMEA1531895
LSHTM-35
Clostridioides difficile
GCA_901006005.1ScaffoldCAAKAQ000000000SAMEA1531872
LSHTM-32
Clostridioides difficile
GCA_901005985.1ScaffoldCAAKAN000000000SAMEA1531847
LSHTM-36
Clostridioides difficile
GCA_901005995.1ContigCAAKAR000000000SAMEA1531837
LSHTM-3
Clostridioides difficile
GCA_901005975.1ContigCAAKAO000000000SAMEA1531880
LSHTM-37
Clostridioides difficile
GCA_901005965.1ContigCAAKAP000000000SAMEA1531834
LSHTM-38
Clostridioides difficile
GCA_901005955.1ContigCAAKAL000000000SAMEA1531840
LSHTM-31
Clostridioides difficile
GCA_901005935.1ScaffoldCAAKAK000000000SAMEA1531863
LSHTM-30
Clostridioides difficile
GCA_901005945.1ContigCAAKAM000000000SAMEA1531908
LSHTM-2
Clostridioides difficile
GCA_901005925.1ContigCAAKAJ000000000SAMEA1531893
LSHTM-29
Clostridioides difficile
GCA_901005915.1ContigCAAKAI000000000SAMEA1531876
LSHTM-28
Clostridioides difficile
GCA_901005905.1ContigCAAKAH000000000SAMEA1531899
LSHTM-27
Clostridioides difficile
GCA_901006055.1ContigCAAKAZ000000000SAMEA1531861
LSHTM-41
Clostridioides difficile
GCA_901006035.1ContigCAAKAS000000000SAMEA1531824
LSHTM-46
Clostridioides difficile
GCA_901006025.1ScaffoldCAAKAT000000000SAMEA1531902
LSHTM-50
Clostridioides difficile
GCA_901005895.1ContigCAAKAG000000000SAMEA1531864
LSHTM-25
Clostridioides difficile
GCA_901005885.1ScaffoldCAAKAF000000000SAMEA1531851
LSHTM-26
Clostridioides difficile
GCA_901005875.1ContigCAAKAB000000000SAMEA1531903
LSHTM-24
Clostridioides difficile
GCA_901005865.1ContigCAAKAD000000000SAMEA1531827
LSHTM-23
Clostridioides difficile
GCA_901005855.1ContigCAAJZZ000000000SAMEA1531900
LSHTM-17
Clostridioides difficile
GCA_901005845.1ContigCAAKAC000000000SAMEA1531832
LSHTM-21
Clostridioides difficile
GCA_901005835.1ContigCAAJZY000000000SAMEA1531919
LSHTM-14
Clostridioides difficile
GCA_901005825.1ScaffoldCAAKAE000000000SAMEA1531841
LSHTM-16
Clostridioides difficile
GCA_901005815.1ScaffoldCAAKAA000000000SAMEA1531856
LSHTM-15
Clostridioides difficile
GCA_901005805.1ContigCAAJZX000000000SAMEA1531839
LSHTM-12
Clostridioides difficile
GCA_901005795.1ContigCAAJZV000000000SAMEA1531857
LSHTM-13
Clostridioides difficile
GCA_901005785.1ContigCAAJZT000000000SAMEA1531916
LSHTM-11
Clostridioides difficile
GCA_901005755.1ContigCAAJZW000000000SAMEA1531889
LSHTM-10
Clostridioides difficile
GCA_900690175.1ContigCAADCP000000000SAMEA1531842
LSHTM-39
Clostridioides difficile
GCA_900690145.1ContigCAADCO000000000SAMEA1531828
LSHTM-40
Clostridioides difficile
GCA_900690155.1ContigCAADCN000000000SAMEA1531867
LSHTM-4
Clostridioides difficile
GCA_900690085.1ContigCAADCL000000000SAMEA1531877
LSHTM-33
Clostridioides difficile
GCA_900690065.1ContigCAADCM000000000SAMEA1531904
LSHTM-34
Clostridioides difficile
GCA_900690015.1ContigCAADCK000000000SAMEA1531894
LSHTM-22
Clostridioides difficile
GCA_900690005.1ContigCAADCJ000000000SAMEA1531886
LSHTM-19
Clostridioides difficile
GCA_900689965.1ContigCAADCI000000000SAMEA1531913
LSHTM-20
Clostridioides difficile
GCA_900689945.1ScaffoldCAADCH000000000SAMEA1531917
LSHTM-18
Clostridioides difficile
GCA_900690695.1ContigCAADDF000000000SAMEA1531883
LSHTM-86
Clostridioides difficile
GCA_900690645.1ContigCAADDD000000000SAMEA1531890
LSHTM-79
Clostridioides difficile
GCA_900690635.1ContigCAADDE000000000SAMEA1531878
LSHTM-84
Clostridioides difficile
GCA_900690625.1ContigCAADDC000000000SAMEA1531831
LSHTM-82
Clostridioides difficile
GCA_900690535.1ScaffoldCAADDB000000000SAMEA1531896
LSHTM-72
Clostridioides difficile
GCA_900690515.1ContigCAADCZ000000000SAMEA1531845
LSHTM-7
Clostridioides difficile
GCA_900690495.1ScaffoldCAADCY000000000SAMEA1531897
LSHTM-67
Clostridioides difficile
GCA_900690475.1ContigCAADDA000000000SAMEA1531888
LSHTM-69
Clostridioides difficile
GCA_900690455.1ContigCAADCX000000000SAMEA1531891
LSHTM-63
Clostridioides difficile
GCA_900690435.1ContigCAADCW000000000SAMEA1531918
LSHTM-58
Clostridioides difficile
GCA_900690425.1ScaffoldCAADCV000000000SAMEA1531853
LSHTM-60
Clostridioides difficile
GCA_900690415.1ContigCAADCT000000000SAMEA1531838
LSHTM-61
Clostridioides difficile
GCA_900690395.1ContigCAADCS000000000SAMEA1531898
LSHTM-57
Clostridioides difficile
GCA_900690365.1ScaffoldCAADCR000000000SAMEA1531871
LSHTM-59
Clostridioides difficile
GCA_900690385.1ContigCAADCU000000000SAMEA1531885
LSHTM-62
Clostridioides difficile
GCA_900690335.1ContigCAADCQ000000000SAMEA1531866
LSHTM-54
Clostridioides difficile
SRA Data Details
ParameterValue
Data volume, Gbases112
Data volume, Mbytes60513

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI
Support Center