Escherichia coli (ID 353170) - BioProject

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Accession: PRJNA353170 ID: 353170

Escherichia coli

Whole genome sequencing of CTX-M-14-producing Escherichia coli of animal and human origin: insights into dissemination of blaCTX-M-14

See Genome Information for Escherichia coli

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9313 additional projects are related by organism.

The aim of this study was to identify the mechanisms of dissemination of this CTX-M variant within and between host species in a defined time period and geographical area.

Accession	PRJNA353170
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Escherichia coli[Taxonomy ID: 562] Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Submission	Registration date: 26-Mar-2019 Hvidovre Hospital - University of Copenhagen

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	4267
WGS master	37
Protein Sequences	187512
Other datasets
BioSample	37
Assembly	37

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

34
3
37

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_004380855.1	MTYF00000000	SAMN06011369	2771-8	Escherichia coli
GCA_004380845.1	MTYE00000000	SAMN06011368	2764-11	Escherichia coli
GCA_004380795.1	MTYB00000000	SAMN06011365	2763-6	Escherichia coli
GCA_004380805.1	MTYD00000000	SAMN06011367	2763-16	Escherichia coli
GCA_004380765.1	MTYA00000000	SAMN06011364	HvH-Ec78	Escherichia coli
GCA_004380775.1	MTYC00000000	SAMN06011366	2763-9	Escherichia coli
GCA_004380735.1	MTXZ00000000	SAMN06011363	HvH-Ec82	Escherichia coli
GCA_004380635.1	MTXW00000000	SAMN06011360	HvH-Ec76	Escherichia coli
GCA_004380705.1	MTXY00000000	SAMN06011362	HvH-Ec81	Escherichia coli
GCA_004380725.1	MTXX00000000	SAMN06011361	HvH-Ec77	Escherichia coli
GCA_004380655.1	MTXU00000000	SAMN06011358	E23	Escherichia coli
GCA_004380625.1	MTXV00000000	SAMN06011359	HvH-Ec75	Escherichia coli
GCA_004380645.1	MTXT00000000	SAMN06011357	E20	Escherichia coli
GCA_004380615.1	MTXS00000000	SAMN06011356	P67	Escherichia coli
GCA_004380535.1	MTXO00000000	SAMN06011352	P08	Escherichia coli
GCA_004380525.1	MTXP00000000	SAMN06011353	P33	Escherichia coli
GCA_004380545.1	MTXQ00000000	SAMN06011354	P58	Escherichia coli
GCA_004380555.1	MTXR00000000	SAMN06011355	P60	Escherichia coli
GCA_004380515.1	MTXN00000000	SAMN06011351	3808-3	Escherichia coli
GCA_004380435.1	MTXJ00000000	SAMN06011347	7624-10	Escherichia coli
GCA_004380475.1	MTXL00000000	SAMN06011349	3217-1	Escherichia coli
GCA_004380405.1	MTXI00000000	SAMN06011346	6869-33	Escherichia coli
GCA_004380445.1	MTXM00000000	SAMN06011350	3217-3	Escherichia coli
GCA_004380425.1	MTXK00000000	SAMN06011348	2080-1	Escherichia coli
GCA_004380335.1	MTXF00000000	SAMN06011343	2274-3	Escherichia coli
GCA_004380375.1	MTXH00000000	SAMN06011345	6869-25	Escherichia coli
GCA_004380355.1	MTXG00000000	SAMN06011344	6869-14	Escherichia coli
GCA_004380315.1	MTXE00000000	SAMN06011342	1493-3	Escherichia coli
GCA_004380265.1	MTXB00000000	SAMN06011339	2700-1	Escherichia coli
GCA_004380285.1	MTXD00000000	SAMN06011341	670-7A	Escherichia coli
GCA_004380255.1	MTXC00000000	SAMN06011340	422-16A	Escherichia coli
GCA_004380235.1	MTXA00000000	SAMN06011338	2698-1	Escherichia coli
GCA_004380225.1	MTWZ00000000	SAMN06011337	2469-1	Escherichia coli
GCA_004380145.1	MTWW00000000	SAMN06011334	823-1	Escherichia coli
GCA_004380175.1	MTWY00000000	SAMN06011336	1276-1	Escherichia coli
GCA_004380165.1	MTWV00000000	SAMN06011333	M5.A.24.P-A	Escherichia coli
GCA_004380155.1	MTWX00000000	SAMN06011335	1034-1	Escherichia coli

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Escherichia coli

Whole genome sequencing of CTX-M-14-producing Escherichia coli of animal and human origin: insights into dissemination of blaCTX-M-14

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