Bacteria (ID 414343) - BioProject

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Accession: PRJNA414343 ID: 414343

Bacteria

Microbacterium environmental isolates Raw sequence reads

The goal of this project is to understand the genomic potential of 18 environmental bacteria that were isolated from a contaminated terrestrial sediment site.

Accession	PRJNA414343
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Learman DR et al., "Comparative genomics of 16 Microbacterium spp. that tolerate multiple heavy metals and antibiotics.", PeerJ, 2019;6:e6258
Submission	Registration date: 26-Jul-2018 Central Michigan University
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	10857
WGS master	18
SRA Experiments	30
Publications
PubMed	1
PMC	1
Other datasets
BioSample	30
Assembly	18

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

18
18

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_003343425.1	QMGC00000000	SAMN09483754	K6W	Bacillus sp. K6W
GCA_003343345.1	QMGB00000000	SAMN09483753	PF5	Bacillus sp. PF5
GCA_003343335.1	QMGD00000000	SAMN09483755	B12	Cellulomonas sp. B12
GCA_003343365.1	QMGE00000000	SAMN09483756	K38	Cellulomonas sp. K38
GCA_003343395.1	QMGF00000000	SAMN09483757	K39	Cellulomonas sp. K39
GCA_003343325.1	QMGG00000000	SAMN09483758	K42B	Cellulomonas sp. K42B
GCA_004794515.1	SSDF00000000	SAMN07786723	A20	Microbacterium sp. A20
GCA_004794535.1	SSDG00000000	SAMN07786724	K19	Microbacterium sp. K19
GCA_004794525.1	SSDH00000000	SAMN07786725	K21	Microbacterium sp. K21
GCA_004794475.1	SSDI00000000	SAMN07786726	K22	Microbacterium sp. K22
GCA_004794465.1	SSDJ00000000	SAMN07786727	K24	Microbacterium sp. K24
GCA_004794435.1	SSDK00000000	SAMN07786728	K27	Microbacterium sp. K27
GCA_004794415.1	SSDL00000000	SAMN07786743	K33	Microbacterium sp. K33
GCA_004794375.1	SSDM00000000	SAMN07786744	K35	Microbacterium sp. K35
GCA_004794355.1	SSDN00000000	SAMN07786745	K36	Microbacterium sp. K36
GCA_004794395.1	SSDO00000000	SAMN07786746	K41	Microbacterium sp. K41
GCA_004794385.1	SSDP00000000	SAMN07786748	K5D	Microbacterium sp. K5D
GCA_004794315.1	SSDQ00000000	SAMN07786749	PF5	Microbacterium sp. PF5

SRA Data Details

Parameter	Value
Data volume, Gbases	37
Data volume, Mbytes	23303

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Bacteria

Microbacterium environmental isolates Raw sequence reads

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