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Links from Nucleotide

Accession: PRJNA418768 ID: 418768

Staphylococcus pseudintermedius

Staphylococcus pseudintermedius Genome sequencing and assembly

See Genome Information for Staphylococcus pseudintermedius
Evaluation of genotyping methods for Staphylococcus pseudintermedius at local, regional and global scales.
AccessionPRJNA418768
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismStaphylococcus pseudintermedius[Taxonomy ID: 283734]
Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus intermedius group; Staphylococcus pseudintermedius
Grants
  • "Evaluation of genotyping methods for Staphylococcus pseudintermedius at local, regional and global scales." (Grant ID D17CA-019, MORRIS ANIMAL FOUNDATION)
SubmissionRegistration date: 7-Feb-2018
Washington State University
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)1825
WGS master91
Genomic DNA7
Protein Sequences120649
Other datasets
BioSample97
Assembly96
Assembly details:
Assembly levelNumber of Assemblies
5
91
96
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_002976235.2ContigPRDP00000000
SAMN08475772
MRSP 1019
GCA_004794815.2ChromosomeSAMN10389971
ME4692
GCA_004794835.2ChromosomeSAMN09206896
VTH737
GCA_004794825.2ChromosomeSAMN09206879
MAD568
GCA_004794845.2ChromosomeSAMN10389939
MAD627
GCA_004794855.2ChromosomeSAMN09206883
MAD401
GCA_006406245.1ContigQGOY00000000
SAMN09206895
VTH711
GCA_006406235.1ContigQGOV00000000
SAMN09206898
MAD429
GCA_006383115.1ContigQGPG00000000
SAMN09206887
MAD424
GCA_006383085.1ContigQGPB00000000
SAMN09206892
VTH633
GCA_006383175.1ContigQGPM00000000
SAMN09206881
MAD385
GCA_006382055.1ContigQGOR00000000
SAMN09206902
MAD509
GCA_006382145.1ContigQGPA00000000
SAMN09206893
VTH682
GCA_006382135.1ContigQGPD00000000
SAMN09206890
MAD478
GCA_006382125.1ContigQGOW00000000
SAMN09206897
MAD430
GCA_006381905.1ContigQGOP00000000
SAMN09206904
MAD418
GCA_006382015.1ContigQGOS00000000
SAMN09206901
MAD391
GCA_006381995.1ContigQGOT00000000
SAMN09206900
MAD425
GCA_006382595.1ContigQGPY00000000
SAMN09206869
MAD420
GCA_006382545.1ContigQGPW00000000
SAMN09206871
MAD480
GCA_006382555.1ContigQGPX00000000
SAMN09206870
MAD435
GCA_006382515.1ContigQGPR00000000
SAMN09206876
MAD510
GCA_006382505.1ContigQGPS00000000
SAMN09206875
MAD503
GCA_006382495.1ContigQGPU00000000
SAMN09206873
MAD500
GCA_006382445.1ContigQGPP00000000
SAMN09206878
MAD512
GCA_006382455.1ContigQGPH00000000
SAMN09206886
MAD416
GCA_006382415.1ContigQGOZ00000000
SAMN09206894
VTH775
GCA_006382405.1ContigQGPF00000000
SAMN09206888
VTH530
GCA_006382395.1ContigQGPN00000000
SAMN09206880
MAD380
GCA_006382355.1ContigQGPE00000000
SAMN09206889
VTH621
GCA_006382315.1ContigQGOU00000000
SAMN09206899
MAD428
GCA_006382325.1ContigQGOQ00000000
SAMN09206903
MAD417
GCA_006382305.1ContigQGPV00000000
SAMN09206872
MAD494
GCA_006382295.1ContigQGPC00000000
SAMN09206891
VTH625
GCA_006382275.1ContigQGPT00000000
SAMN09206874
MAD502
GCA_006382235.1ContigQGPJ00000000
SAMN09206884
MAD404
GCA_006382215.1ContigQGPQ00000000
SAMN09206877
MAD511
GCA_006382205.1ContigQGPL00000000
SAMN09206882
MAD400
GCA_006382195.1ContigQGPI00000000
SAMN09206885
MAD406
GCA_002976305.1ContigPRDQ00000000
SAMN08475774
MRSP 424
GCA_002976255.1ContigPRDR00000000
SAMN08475775
MRSP 980
GCA_002922705.1ContigPHID00000000
SAMN08028737
MRSP 476
GCA_002922675.1ContigPHHZ00000000
SAMN08028756
MRSP 738
GCA_002922635.1ContigPHIB00000000
SAMN08028739
MRSP 651
GCA_002922645.1ContigPHIC00000000
SAMN08028738
MRSP 586
GCA_002922625.1ContigPHIA00000000
SAMN08028740
MRSP 684
GCA_002922555.1ContigPHHY00000000
SAMN08028820
MRSP 742
GCA_002922545.1ContigPHHX00000000
SAMN08028736
MRSP 473
GCA_002922575.1ContigPHHV00000000
SAMN08028731
MRSP 200
GCA_002922565.1ContigPHHW00000000
SAMN08028732
MRSP 335
GCA_016805285.1ContigRJRY00000000
SAMN10389928
MAD431
GCA_016805265.1ContigRJRX00000000
SAMN10389929
MAD432
GCA_016805245.1ContigRJRW00000000
SAMN10389930
MAD433
GCA_016805215.1ContigRJRU00000000
SAMN10389932
MAD479
GCA_016805205.1ContigRJRV00000000
SAMN10389931
MAD472
GCA_016805185.1ContigRJRT00000000
SAMN10389933
MAD486
GCA_016805145.1ContigRJRR00000000
SAMN10389935
MAD488
GCA_016805155.1ContigRJRS00000000
SAMN10389934
MAD487
GCA_016805125.1ContigRJRQ00000000
SAMN10389936
MAD498
GCA_016805105.1ContigRJRP00000000
SAMN10389937
MAD506
GCA_016805085.1ContigRJRO00000000
SAMN10389938
MAD507
GCA_016805055.1ContigRJRK00000000
SAMN10389942
MAD635
GCA_016805035.1ContigRJRM00000000
SAMN10389940
MAD629
GCA_016805025.1ContigRJRL00000000
SAMN10389941
MAD632
GCA_016805005.1ContigRJRJ00000000
SAMN10389943
MAD637
GCA_016804985.1ContigRJRI00000000
SAMN10389944
MAD638
GCA_016804965.1ContigRJRH00000000
SAMN10389945
MAD639
GCA_016804945.1ContigRJRG00000000
SAMN10389946
MAD640
GCA_016804925.1ContigRJRF00000000
SAMN10389947
MAD641
GCA_016804905.1ContigRJRD00000000
SAMN10389949
MAD644
GCA_016804885.1ContigRJRE00000000
SAMN10389948
MAD643
GCA_016804865.1ContigRJRA00000000
SAMN10389952
MAD652
GCA_016804845.1ContigRJRC00000000
SAMN10389950
MAD647
GCA_016804825.1ContigRJRB00000000
SAMN10389951
MAD649
GCA_016804805.1ContigRJQZ00000000
SAMN10389953
MAD653
GCA_016804785.1ContigRJQY00000000
SAMN10389954
MAD654
GCA_016804765.1ContigRJQV00000000
SAMN10389957
MAD657
GCA_016804735.1ContigRJQX00000000
SAMN10389955
MAD655
GCA_016804725.1ContigRJQW00000000
SAMN10389956
MAD656
GCA_016804685.1ContigRJQU00000000
SAMN10389958
MAD658
GCA_016804695.1ContigRJQT00000000
SAMN10389959
MAD659
GCA_016804665.1ContigRJQS00000000
SAMN10389960
MAD661
GCA_016804635.1ContigRJQP00000000
SAMN10389963
MAD665
GCA_016804625.1ContigRJQR00000000
SAMN10389961
MAD663
GCA_016804605.1ContigRJQQ00000000
SAMN10389962
MAD664
GCA_016804585.1ContigRJQO00000000
SAMN10389964
MAD668
GCA_016804565.1ContigRJQM00000000
SAMN10389966
MAD672
GCA_016804545.1ContigRJQN00000000
SAMN10389965
MAD670
GCA_016804515.1ContigRJQK00000000
SAMN10389968
MAD678
GCA_016804505.1ContigRJQL00000000
SAMN10389967
MAD675
GCA_016804485.1ContigRJQJ00000000
SAMN10389969
ME4674
GCA_016804435.1ContigRJQG00000000
SAMN10389972
ME4698
GCA_016804425.1ContigRJQF00000000
SAMN10389973
VTH1042
GCA_016804415.1ContigRJQE00000000
SAMN10389974
VTH551
GCA_016804405.1ContigRJQD00000000
SAMN10389975
VTH934
GCA_016804385.1ContigRJQI00000000
SAMN10389970
ME4653

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