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Links from Nucleotide

Accession: PRJNA418674 ID: 418674

Escherichia

The Genome sequencing and assembly of Escherichia spp.

The Genome sequencing and assembly of Escherichia spp.
AccessionPRJNA418674
Data TypeGenome sequencing and assembly
ScopeMultispecies
PublicationsFeng Y et al., "Escherichia coli of sequence type 3835 carrying bla NDM-1, bla CTX-M-15, bla CMY-42 and bla SHV-12.", Sci Rep, 2015 Jul 21;5:12275
SubmissionRegistration date: 16-Nov-2017
West China Hospital, Sichuan University
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)4182
WGS master24
Genomic DNA160
SRA Experiments92
Protein Sequences127966
Publications
PubMed1
PMC1
Other datasets
BioSample92
Assembly48
Assembly details:
Assembly levelNumber of Assemblies
25
16
7
48
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_002154095.1ScaffoldMSQX00000000
SAMN06197013
WCHEC050609
GCA_002154075.1ScaffoldMSRB00000000
SAMN05938917
WCHEC050606
GCA_002154135.1ScaffoldMSRA00000000
SAMN06197017
WCHEC050622
GCA_002153985.1ContigMSQZ00000000
SAMN06197016
WCHEC050618
GCA_002154035.1ScaffoldMSQY00000000
SAMN06197015
WCHEC050614
GCA_002165055.1ScaffoldNGVC00000000
SAMN06909181
WCHEC020033
GCA_002165045.1ScaffoldNGVB00000000
SAMN06909182
SCEC020066
GCA_002165035.1ScaffoldNGVK00000000
SAMN06909173
SCEC020004
GCA_002165005.1ScaffoldNGVJ00000000
SAMN06909174
SCEC020005
GCA_002164985.1ScaffoldNGVI00000000
SAMN06909175
WCHEC7
GCA_002164955.1ScaffoldNGVH00000000
SAMN06909176
SCEC020016
GCA_002164935.1ScaffoldNGVE00000000
SAMN06909179
WCHEC020028
GCA_002164915.1ScaffoldNGVA00000000
SAMN06909183
SCEC020068
GCA_002225075.1ScaffoldNMQY00000000
SAMN07340853
WCHEC-LL123
GCA_001867205.1ContigLSMG00000000
SAMN04482604
WCHEC1613
GCA_002165115.2Complete genomeSAMN06909172
SCEC020001
GCA_003268695.1Complete genomeSAMN09202772
WCHEC035148
GCA_003051985.2Complete genomeSAMN06209728
WCHEC005784
GCA_002870165.1Complete genomeSAMN08281024
SCEC020007
GCA_002811725.1ScaffoldNTBF00000000
SAMN07602137
SCEC020088
GCA_002811605.1ScaffoldNTBG00000000
SAMN07602136
SCEC020076
GCA_001014795.2ContigLCWG00000000
SAMN03083281
WCHEC005008
GCA_004295365.1Complete genomeSAMN10956393
WCHEC025970
GCA_002164595.2Complete genomeSAMN06231252
WCHEC000837
GCA_002165095.2Complete genomeSAMN06909177
SCEC020022
GCA_002811555.3Complete genomeSAMN07510673
WCHEC025943
GCA_003719695.1ScaffoldRIAW00000000
SAMN08932732
WCHEC005828
GCA_003711045.1Complete genomeSAMN08932733
WCHEC020031
GCA_002164865.2Complete genomeSAMN06909180
WCHEC020032
GCA_002164975.2Complete genomeSAMN06909178
SCEC020026
GCA_002155015.2ContigMUWZ00000000
SAMN06197012
050604
GCA_022359985.1ContigJAKSEK000000000
SAMN25987976
035166
GCA_022559685.1Complete genomeSAMN06209720
WCHEC005215
GCA_022559065.1Complete genomeSAMN12623214
WCHEC115106
GCA_022559045.1Complete genomeSAMN08932753
WCHEC040047
GCA_022559025.1Complete genomeSAMN12158048
WCHEC025985
GCA_022559005.1Complete genomeSAMN12623215
WCHEC025157
GCA_022558985.1Complete genomeSAMN09229080
WCHEC035148
GCA_023554575.1ContigJAMJWA000000000
SAMN28537734
140032
GCA_041361315.1ContigJBGJJC000000000
SAMN09842379
WCHEC115101
GCA_002164645.3Complete genomeSAMN06909152
WCHEC4533
GCA_002850675.5Complete genomeSAMN07768275
SCEC020023
GCA_002164635.4Complete genomeSAMN06909153
WCHEC96200
GCA_001969285.4Complete genomeSAMN06197014
WCHEC050613
GCA_002945135.3Complete genomeSAMN06209723
WCHEC005237
GCA_013426115.1Complete genomeSAMN15447143
005008
GCA_013426095.1Complete genomeSAMN09202771
WCHEC035125
GCA_013426075.1Complete genomeSAMN08932748
WCHEC035123
SRA Data Details
ParameterValue
Data volume, Gbases125
Data volume, Mbytes51051

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