marine metagenome (ID 552566) - BioProject

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Accession: PRJNA552566 ID: 552566

marine metagenome

Coastal ocean metagenomes from Sapelo Island (Georgia, USA)

The waters surrounding Sapelo Island (Georgia, USA) have become a useful case study of microbial biogeochemical cycling of organic matter in the coastal ocean. More...

Accession	PRJNA552566
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	marine metagenome[Taxonomy ID: 408172] unclassified sequences; metagenomes; ecological metagenomes; marine metagenome
Publications	Published online, DOI: 10.1128/MRA.00934-19
Submission	Registration date: 23-Aug-2019 Sapelo Island Microbial Carbon Observatory - University of Georgia
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	7305
WGS master	46
SRA Experiments	4
Other datasets
BioSample	50
Assembly	46

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

46
46

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_008081185.1	VMCV00000000	SAMN12255917	12_1	Acidimicrobiaceae bacterium
GCA_008081435.1	VMCI00000000	SAMN12255904	3_7	Acidimicrobiia bacterium
GCA_008081195.1	VMCT00000000	SAMN12255915	9_2	Alphaproteobacteria bacterium
GCA_008081495.1	VMCF00000000	SAMN12255901	1_42	Alphaproteobacteria bacterium
GCA_008081505.1	VMCG00000000	SAMN12255902	1_43	Alphaproteobacteria bacterium
GCA_008081695.1	VMBW00000000	SAMN12255892	1_8	Alphaproteobacteria bacterium
GCA_008081665.1	VMBX00000000	SAMN12255893	1_13	Alphaproteobacteria bacterium
GCA_008081635.1	VMBY00000000	SAMN12255894	1_15	Alphaproteobacteria bacterium
GCA_008081615.1	VMCA00000000	SAMN12255896	1_31	Alphaproteobacteria bacterium
GCA_008081005.1	VMDD00000000	SAMN12255925	19_1	Alphaproteobacteria bacterium
GCA_008081305.1	VMCP00000000	SAMN12255911	6_2	Bacteroidota bacterium
GCA_008080995.1	VMDE00000000	SAMN12255926	19_2	Candidatus Poseidoniales archaeon
GCA_008080825.1	VMDL00000000	SAMN12255933	31_1	Candidatus Poseidoniales archaeon
GCA_008080985.1	VMDF00000000	SAMN12255927	21_1	Chitinophagia bacterium
GCA_008081115.1	VMCY00000000	SAMN12255920	16_1	Cyanobium sp. 16_1
GCA_008081175.1	VMCW00000000	SAMN12255918	13_1	Flavobacteriaceae bacterium
GCA_008081325.1	VMCO00000000	SAMN12255910	5_5	Flavobacteriaceae bacterium
GCA_008081535.1	VMCE00000000	SAMN12255900	1_37	Flavobacteriia bacterium
GCA_008081575.1	VMCC00000000	SAMN12255898	1_35	Gammaproteobacteria bacterium
GCA_008081605.1	VMBZ00000000	SAMN12255895	1_19	Gammaproteobacteria bacterium
GCA_008081525.1	VMCD00000000	SAMN12255899	1_36	Gammaproteobacteria bacterium
GCA_008081705.1	VMBV00000000	SAMN12255891	1_5	Gammaproteobacteria bacterium
GCA_008081205.1	VMCU00000000	SAMN12255916	10_2	Gammaproteobacteria bacterium
GCA_008081045.1	VMDC00000000	SAMN12255924	18_3	Gammaproteobacteria bacterium
GCA_008080945.1	VMDH00000000	SAMN12255929	24_2	Gammaproteobacteria bacterium
GCA_008080925.1	VMDJ00000000	SAMN12255931	27_1	Gammaproteobacteria bacterium
GCA_008080915.1	VMDI00000000	SAMN12255930	24_3	Gammaproteobacteria bacterium
GCA_008081075.1	VMDB00000000	SAMN12255923	18_1	Halieaceae bacterium
GCA_008081405.1	VMCH00000000	SAMN12255903	3_6	Ilumatobacter sp.
GCA_008081125.1	VMCX00000000	SAMN12255919	14_1	Nitrosomonadales bacterium
GCA_008080855.1	VMBU00000000	SAMN12255935	33_1	Nitrosopumilus sp.
GCA_008080815.1	VMDM00000000	SAMN12255934	32_1	Nitrosopumilus sp.
GCA_008081235.1	VMCS00000000	SAMN12255914	9_1	Oceanospirillales bacterium
GCA_008081425.1	VMCL00000000	SAMN12255907	4_8	Paracoccaceae bacterium
GCA_008081595.1	VMCB00000000	SAMN12255897	1_33	Pelagibacteraceae bacterium
GCA_008081415.1	VMCK00000000	SAMN12255906	4_2	Phaeobacter sp.
GCA_008081345.1	VMCM00000000	SAMN12255908	4_9	Phaeobacter sp.
GCA_008081285.1	VMCQ00000000	SAMN12255912	7_1	Phaeobacter sp.
GCA_008081275.1	VMCR00000000	SAMN12255913	7_2	Phaeobacter sp.
GCA_008080965.1	VMDG00000000	SAMN12255928	22_1	Planctomycetales bacterium
GCA_008081315.1	VMCN00000000	SAMN12255909	5_2	Pseudomonadota bacterium
GCA_008081085.1	VMDA00000000	SAMN12255922	17_1	Rhodobacterales bacterium
GCA_008081395.1	VMCJ00000000	SAMN12255905	4_1	Rhodospirillales bacterium
GCA_008080835.1	VMDK00000000	SAMN12255932	28_1	Sphingobacteriia bacterium
GCA_008081095.1	VMCZ00000000	SAMN12255921	16_2	Synechococcus sp. 16_2
GCA_008081735.1	VMBT00000000	SAMN12238535	-	marine metagenome

SRA Data Details

Parameter	Value
Data volume, Gbases	6
Data volume, Mbytes	2935

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marine metagenome

Coastal ocean metagenomes from Sapelo Island (Georgia, USA)

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