Salmonella enterica subsp. enterica (ID 312617) - BioProject

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Accession: PRJNA312617 ID: 312617

Salmonella enterica subsp. enterica

Evaluation of plasmid-mediated virulence in Salmonella enterica

See Genome Information for Salmonella enterica

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3964 additional projects are related by organism.

This study will be investigating the role of plasmid-encoded factors, such as iron acquisition component(s) in regulating virulence of Salmonella enterica specifically the serovar Heidelberg. More...

Accession	PRJNA312617
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Salmonella enterica subsp. enterica[Taxonomy ID: 59201] Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica
Submission	Registration date: 19-May-2016 U.S. Food and Drug Administration
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	39243
WGS master	151
SRA Experiments	116
Protein Sequences	730811
Other datasets
BioSample	163
Assembly	151

Assembly details:

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Assembly level

Number of Assemblies

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Contig

Total

135
16
151

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_002283185.1	NQWW00000000	SAMN07508819	NCTR730	Salmonella enterica subsp. enterica serovar Braenderup
GCA_002283275.1	NQWV00000000	SAMN07508698	NCTR350	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002283095.1	NQWN00000000	SAMN07508763	NCTR380	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_002283215.1	NQWQ00000000	SAMN07507241	NCTR144	Salmonella enterica subsp. enterica serovar Aberdeen
GCA_002283235.1	NQWS00000000	SAMN07508694	NCTR177	Salmonella enterica subsp. enterica serovar Albany
GCA_002283205.1	NQWJ00000000	SAMN07508818	NCTR488	Salmonella enterica subsp. enterica serovar Hadar
GCA_002283175.1	NQWK00000000	SAMN07508817	NCTR487	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_002283125.1	NQWL00000000	SAMN07508816	NCTR462	Salmonella enterica subsp. enterica serovar Anatum
GCA_002283105.1	NQWM00000000	SAMN07508765	NCTR409	Salmonella enterica subsp. enterica serovar Virchow
GCA_002283115.1	NQWO00000000	SAMN07508699	NCTR361	Salmonella enterica subsp. enterica serovar Blockley
GCA_002283065.1	NQWT00000000	SAMN07508695	NCTR281	Salmonella enterica subsp. enterica serovar Kentucky
GCA_002283055.1	NQWU00000000	SAMN07508696	NCTR341	Salmonella enterica subsp. enterica serovar Blockley
GCA_002283015.1	NQWP00000000	SAMN07507240	NCTR75	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_002283025.1	NQWR00000000	SAMN07507242	NCTR148	Salmonella enterica subsp. enterica serovar Kentucky
GCA_002265755.1	NPEN00000000	SAMN07420504	SE697	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002265745.1	NPEP00000000	SAMN07421183	SE991	Salmonella enterica subsp. enterica serovar Heidelberg
GCA_002265715.1	NPEO00000000	SAMN07420503	SE1148	Salmonella enterica subsp. enterica serovar Heidelberg
GCA_002265705.1	NPES00000000	SAMN07421251	SE89N	Salmonella enterica subsp. enterica serovar Kentucky
GCA_002265815.1	NPEQ00000000	SAMN07421215	SE144	Salmonella enterica subsp. enterica serovar Heidelberg
GCA_002265805.1	NPER00000000	SAMN07421232	SE36N	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002265545.1	NPEM00000000	SAMN07420399	SE146	Salmonella enterica subsp. enterica serovar Heidelberg
GCA_002265475.1	NPEL00000000	SAMN07420502	SE143	Salmonella enterica subsp. enterica serovar Heidelberg
GCA_002265465.1	NPFC00000000	SAMN07419982	SE142	Salmonella enterica subsp. enterica serovar Heidelberg
GCA_002634305.1	PDNO00000000	SAMN07781832	SE368	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002634225.1	PDNN00000000	SAMN07781963	SE373	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002631125.1	PDNK00000000	SAMN07781985	SE426	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002631135.1	PDNL00000000	SAMN07781965	SE389	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002631105.1	PDNM00000000	SAMN07781964	SE376	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002723705.1	PDOJ00000000	SAMN07782027	SE492	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002723695.1	PDOL00000000	SAMN07782029	SE850	Salmonella enterica subsp. enterica serovar Dublin
GCA_002723675.1	PDOI00000000	SAMN07781986	SE484	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002723785.1	PDOK00000000	SAMN07782028	SE494	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002723685.1	PDOM00000000	SAMN07782030	SE853	Salmonella enterica subsp. enterica serovar Dublin
GCA_002532825.1	NQYI00000000	SAMN07507239	NCTR30	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_002843885.1	PJLN00000000	SAMN08153369	1087	Salmonella enterica subsp. enterica serovar Newport
GCA_002861645.1	PJUM00000000	SAMN08165383	388	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002795785.1	PHGW00000000	SAMN08040232	SE463	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002795745.1	PHGY00000000	SAMN08040237	N152	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_002795725.1	PHGX00000000	SAMN08040236	N029	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002803695.1	PHUO00000000	SAMN08026552	CFS85	Salmonella enterica subsp. enterica serovar Kentucky
GCA_002803685.1	PHUN00000000	SAMN08026547	CFS84	Salmonella enterica subsp. enterica serovar Kentucky
GCA_002803705.1	PHUP00000000	SAMN08026553	CFS86	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_002810205.1	PIJU00000000	SAMN08026555	CFS87	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_003600955.1	QZMR00000000	SAMN10091906	MDH-24	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003600925.1	QZMP00000000	SAMN10086248	MDH-15	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003600915.1	QZMQ00000000	SAMN10092220	MDH-22	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003600325.1	QZFK00000000	SAMN10086981	MDH-19	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003600315.1	QZFO00000000	SAMN10091755	MDH-25	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003600285.1	QZFL00000000	SAMN10091242	MDH-20	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003600275.1	QZFH00000000	SAMN10086911	MDH-16	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003600175.1	QZEP00000000	SAMN10079856	MDH-5	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003600165.1	QZEQ00000000	SAMN10079839	MDH-4	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003600215.1	QZEK00000000	SAMN10083770	MDH-10	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003600105.1	QZEM00000000	SAMN10083767	MDH-8	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003600125.1	QZFE00000000	SAMN10086140	MDH-12	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003600095.1	QZEN00000000	SAMN10083766	MDH-7	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003600065.1	QZEO00000000	SAMN10079865	MDH-6	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003600045.1	QZET00000000	SAMN10079816	MDH-1	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003600035.1	QZFJ00000000	SAMN10086980	MDH-18	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003599985.1	QZER00000000	SAMN10079835	MDH-3	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003600005.1	QZFG00000000	SAMN10086142	MDH-14	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003599975.1	QZFF00000000	SAMN10086141	MDH-13	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003598875.1	QZFQ00000000	SAMN10092398	MDH-27	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003598675.1	QZFD00000000	SAMN10083775	MDH-11	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003598665.1	QZEL00000000	SAMN10083768	MDH-9	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003598815.1	QZFN00000000	SAMN10092028	MDH-23	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003598795.1	QZES00000000	SAMN10079824	MDH-2	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003598765.1	QZFM00000000	SAMN10092270	MDH-21	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003598745.1	QZFI00000000	SAMN10086933	MDH-17	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_003598865.1	QZFP00000000	SAMN10092407	MDH-26	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_001729045.1	LYRT00000000	SAMN05172537	ST478	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_001729025.1	LYRR00000000	SAMN05172532	ST397	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_001729035.1	LYRS00000000	SAMN05172535	ST452	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_001700365.1	LXGZ00000000	SAMN04925901	SE710A	Salmonella enterica subsp. enterica
GCA_001700345.1	LXHA00000000	SAMN04925824	SE696A	Salmonella enterica subsp. enterica
GCA_001647955.1	LSZD00000000	SAMN04501080	SE163A	Salmonella enterica subsp. enterica
GCA_001647935.1	LSZE00000000	SAMN04500993	SE819	Salmonella enterica subsp. enterica
GCA_008830145.1	WAHC00000000	SAMN12830923	SEWSLH-12	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_008830115.1	WAHE00000000	SAMN12830925	SEWSLH-14	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_008830095.1	WAHD00000000	SAMN12830924	SEWSLH-13	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_008830075.1	WAHG00000000	SAMN12830927	SEWSLH-16	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_008830065.1	WAHF00000000	SAMN12830926	SEWSLH-15	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_008830045.1	WAHH00000000	SAMN12830928	SEWSLH-17	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_008829995.1	WAHI00000000	SAMN12830929	SEWSLH-18	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_008829985.1	WAHK00000000	SAMN12830931	SEWSLH-20	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_008829975.1	WAHJ00000000	SAMN12830930	SEWSLH-19	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_008829965.1	WAHL00000000	SAMN12830932	SEWSLH-25	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_008829945.1	WAHM00000000	SAMN12830933	SEWSLH-26	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_008829915.1	WAHO00000000	SAMN12830935	SEWSLH-28	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_008829905.1	WAHN00000000	SAMN12830934	SEWSLH-27	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_008829865.1	WAHP00000000	SAMN12830936	SEWSLH-29	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_008829875.1	WAHQ00000000	SAMN12830937	SEWSLH-30	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_008329695.1	VTSU00000000	SAMN12661305	SET 462	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008123505.1	VSXU00000000	SAMN12608818	SET417	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008123305.1	VSWR00000000	SAMN12608859	SETN066	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008123295.1	VSWW00000000	SAMN12608853	SETN034	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008123285.1	VSWP00000000	SAMN12608861	SETN068	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008123255.1	VSWZ00000000	SAMN12608851	SETN032	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008123245.1	VSXH00000000	SAMN12608829	SET457	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008123205.1	VSWM00000000	SAMN12608864	SETN071	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008123195.1	VSWL00000000	SAMN12608866	SETN075	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008123175.1	VSWQ00000000	SAMN12608860	SETN067	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008123155.1	VSWO00000000	SAMN12608862	SETN069	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008123125.1	VSXJ00000000	SAMN12608835	SET475	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008123105.1	VSWY00000000	SAMN12608848	SETN028	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008123115.1	VSWK00000000	SAMN12608867	SETN135	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008123075.1	VSWI00000000	SAMN12608869	SETN140	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008123055.1	VSWX00000000	SAMN12608850	SETN030	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008123005.1	VSXC00000000	SAMN12608845	SET498	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122995.1	VSXV00000000	SAMN12608817	SET411	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008123025.1	VSWN00000000	SAMN12608863	SETN070	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122975.1	VSXR00000000	SAMN12608822	SET423	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122955.1	VSXO00000000	SAMN12608825	SET447	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122925.1	VSXN00000000	SAMN12608826	SET448	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122885.1	VSXD00000000	SAMN12608842	SET487	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122905.1	VSXT00000000	SAMN12608819	SET419	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122895.1	VSXL00000000	SAMN12608828	SET455	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122855.1	VSXK00000000	SAMN12608830	SET458	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122815.1	VSXM00000000	SAMN12608827	SET449	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122795.1	VSXF00000000	SAMN12608838	SET481	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122805.1	VSXE00000000	SAMN12608840	SET485	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122785.1	VSXA00000000	SAMN12608849	SETN029	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122735.1	VSWV00000000	SAMN12608854	SETN035	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122715.1	VSXG00000000	SAMN12608833	SET464	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122695.1	VSXB00000000	SAMN12608847	SET500	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122705.1	VSWS00000000	SAMN12608858	SETN065	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122685.1	VSXI00000000	SAMN12608821	SET421	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122635.1	VSWT00000000	SAMN12608857	SETN063	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122585.1	VSWJ00000000	SAMN12608868	SETN138	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122615.1	VSWU00000000	SAMN12608855	SETN061	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122605.1	VSXQ00000000	SAMN12608823	SET427	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122595.1	VSXW00000000	SAMN12608815	SET393	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122495.1	VSXP00000000	SAMN12608824	SET443	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008122515.1	VSXS00000000	SAMN12608820	SET420	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008274565.1	VTSM00000000	SAMN12608812	SET374	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008274545.1	VTSK00000000	SAMN12608814	SET391	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008274505.1	VTSI00000000	SAMN12608832	SET460	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008274485.1	VTSJ00000000	SAMN12608816	SET397	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008274465.1	VTSH00000000	SAMN12608831	SET459	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008274455.1	VTSF00000000	SAMN12608836	SET477	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008274445.1	VTSG00000000	SAMN12608834	SET465	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008274405.1	VTSE00000000	SAMN12608837	SET478	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008274385.1	VTSD00000000	SAMN12608839	SET483	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008274365.1	VTSC00000000	SAMN12608841	SET486	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008274345.1	VTSA00000000	SAMN12608844	SET495	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008274355.1	VTSB00000000	SAMN12608843	SET489	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008274295.1	VTRX00000000	SAMN12608856	SETN062	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008274285.1	VTRZ00000000	SAMN12608846	SET499	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008274255.1	VTRY00000000	SAMN12608852	SETN033	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008274245.1	VTRW00000000	SAMN12608865	SETN073	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_008274555.1	VTSL00000000	SAMN12608813	SET375	Salmonella enterica subsp. enterica serovar Typhimurium

SRA Data Details

Parameter	Value
Data volume, Gbases	74
Data volume, Mbytes	46413

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Salmonella enterica subsp. enterica

Evaluation of plasmid-mediated virulence in Salmonella enterica

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