ID 554224 - BioProject

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Accession: PRJNA554224 ID: 554224

Typing E. cloacae complex with FTIR spectrscopy

FTIR spectroscopy was used for typing clinical E. cloacae complex isolates. Whole genome sequencing was employed as a reference method.

Accession	PRJNA554224
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 12-Jul-2019 University Hospital Tuebingen
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	13925
WGS master	67
Other datasets
BioSample	67
Assembly	67

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

50
17
67

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_008640815.1	VKEE00000000	SAMN12258115	231	Enterobacter asburiae
GCA_008641005.1	VKEP00000000	SAMN12258104	164	Enterobacter asburiae
GCA_008640995.1	VKEO00000000	SAMN12258105	165	Enterobacter asburiae
GCA_008640915.1	VKEK00000000	SAMN12258109	195	Enterobacter bugandensis
GCA_008640905.1	VKEI00000000	SAMN12258111	209	Enterobacter bugandensis
GCA_008640875.1	VKEH00000000	SAMN12258112	212	Enterobacter bugandensis
GCA_008642095.1	VKFX00000000	SAMN12258070	006	Enterobacter bugandensis
GCA_008642035.1	VKFV00000000	SAMN12258072	013	Enterobacter bugandensis
GCA_008641915.1	VKFO00000000	SAMN12258079	035	Enterobacter bugandensis
GCA_008641635.1	VKFA00000000	SAMN12258093	103	Enterobacter bugandensis
GCA_008641595.1	VKEY00000000	SAMN12258095	107	Enterobacter bugandensis
GCA_008641475.1	VKET00000000	SAMN12258100	144	Enterobacter bugandensis
GCA_008641465.1	VKEU00000000	SAMN12258099	137	Enterobacter bugandensis
GCA_008641395.1	VKEQ00000000	SAMN12258103	159	Enterobacter bugandensis
GCA_008642115.1	VKFZ00000000	SAMN12258068	002	Enterobacter hormaechei
GCA_008641375.1	VKEM00000000	SAMN12258107	173	Enterobacter hormaechei
GCA_008641425.1	VKER00000000	SAMN12258102	154	Enterobacter hormaechei
GCA_008641585.1	VKEZ00000000	SAMN12258094	105	Enterobacter hormaechei
GCA_008641435.1	VKES00000000	SAMN12258101	146	Enterobacter hormaechei
GCA_008641565.1	VKEX00000000	SAMN12258096	110	Enterobacter hormaechei
GCA_008641515.1	VKEV00000000	SAMN12258098	128	Enterobacter hormaechei
GCA_008641525.1	VKEW00000000	SAMN12258097	120	Enterobacter hormaechei
GCA_008641355.1	VOIO00000000	SAMN12258120	239	Enterobacter hormaechei
GCA_008641665.1	VKFC00000000	SAMN12258091	081	Enterobacter hormaechei
GCA_008641645.1	VKFB00000000	SAMN12258092	091	Enterobacter hormaechei
GCA_008641365.1	VKEA00000000	SAMN12258119	238	Enterobacter hormaechei
GCA_008641795.1	VKFI00000000	SAMN12258085	050	Enterobacter hormaechei
GCA_008641745.1	VKFH00000000	SAMN12258086	051	Enterobacter hormaechei
GCA_008641715.1	VKFG00000000	SAMN12258087	057	Enterobacter hormaechei
GCA_008641725.1	VKFE00000000	SAMN12258089	064	Enterobacter hormaechei
GCA_008641735.1	VKFF00000000	SAMN12258088	059	Enterobacter hormaechei
GCA_008641685.1	VKFD00000000	SAMN12258090	069	Enterobacter hormaechei
GCA_008641895.1	VKFN00000000	SAMN12258080	041	Enterobacter hormaechei
GCA_008641965.1	VKFR00000000	SAMN12258076	021	Enterobacter hormaechei
GCA_008641945.1	VKFQ00000000	SAMN12258077	025	Enterobacter hormaechei
GCA_008641935.1	VKFP00000000	SAMN12258078	033	Enterobacter hormaechei
GCA_008642015.1	VKFU00000000	SAMN12258073	015	Enterobacter hormaechei
GCA_008641995.1	VKFS00000000	SAMN12258075	018	Enterobacter hormaechei
GCA_008642055.1	VKFW00000000	SAMN12258071	008	Enterobacter hormaechei
GCA_008642005.1	VKFT00000000	SAMN12258074	017	Enterobacter hormaechei
GCA_008642105.1	VKFY00000000	SAMN12258069	004	Enterobacter hormaechei
GCA_008640495.1	VKDN00000000	SAMN12258133	A13	Enterobacter hormaechei
GCA_008640505.1	VKDP00000000	SAMN12258131	A11	Enterobacter hormaechei
GCA_008640465.1	VKDM00000000	SAMN12258134	A14	Enterobacter hormaechei
GCA_008640865.1	VKEG00000000	SAMN12258113	220	Enterobacter hormaechei
GCA_008640935.1	VKEJ00000000	SAMN12258110	205	Enterobacter hormaechei
GCA_008640965.1	VKEN00000000	SAMN12258106	166	Enterobacter hormaechei
GCA_008640975.1	VKEL00000000	SAMN12258108	183	Enterobacter hormaechei
GCA_008640805.1	VKED00000000	SAMN12258116	232	Enterobacter hormaechei
GCA_008640825.1	VKEF00000000	SAMN12258114	229	Enterobacter hormaechei
GCA_008640775.1	VKEC00000000	SAMN12258117	234	Enterobacter hormaechei
GCA_008640755.1	VKEB00000000	SAMN12258118	237	Enterobacter hormaechei
GCA_008640725.1	VKDZ00000000	SAMN12258121	A01	Enterobacter hormaechei
GCA_008640715.1	VKDY00000000	SAMN12258122	A02	Enterobacter hormaechei
GCA_008640695.1	VKDW00000000	SAMN12258124	A04	Enterobacter hormaechei
GCA_008640635.1	VKDU00000000	SAMN12258126	A06	Enterobacter hormaechei
GCA_008640645.1	VKDV00000000	SAMN12258125	A05	Enterobacter hormaechei
GCA_008640685.1	VKDX00000000	SAMN12258123	A03	Enterobacter hormaechei
GCA_008640605.1	VKDT00000000	SAMN12258127	A07	Enterobacter hormaechei
GCA_008640585.1	VKDS00000000	SAMN12258128	A08	Enterobacter hormaechei
GCA_008640595.1	VKDR00000000	SAMN12258129	A09	Enterobacter hormaechei
GCA_008640545.1	VKDQ00000000	SAMN12258130	A10	Enterobacter hormaechei
GCA_008641825.1	VKFJ00000000	SAMN12258084	049	Enterobacter ludwigii
GCA_008641815.1	VKFK00000000	SAMN12258083	048	Enterobacter ludwigii
GCA_008641835.1	VKFM00000000	SAMN12258081	042	Enterobacter roggenkampii
GCA_008641845.1	VKFL00000000	SAMN12258082	047	Enterobacter roggenkampii
GCA_008640515.1	VKDO00000000	SAMN12258132	A12	Enterobacter roggenkampii

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Typing E. cloacae complex with FTIR spectrscopy

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