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Accession: PRJNA524111 ID: 524111

Novel genomic isolates of S.pyogenes and S.dysgalactiae subsp. equisimilis associated to necrotising fasciitis

Novel genomic isolates of S. pyogenes and S. dysgalactiae subsp. equisimilis associated to necrotising fasciitis (NSTI) obtained from several European hospitals.
AccessionPRJNA524111
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 25-Feb-2019
Rostock University Medical Center
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)8002
WGS master103
Protein Sequences56696
Other datasets
BioSample103
Assembly103
Assembly details:
Assembly levelNumber of Assemblies
103
103
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_009847485.1ContigWVGQ00000000SAMN13634612
INFECT6065_SDSE
GCA_009847065.1ContigWVGB00000000SAMN13634211
INFECT2086_SDSE
GCA_009846995.1ContigWVHI00000000SAMN13634594
INFECT5029_SDSE
GCA_009847585.1ContigWVGX00000000SAMN13634605
INFECT6037_SDSE
GCA_009848215.1ContigWVGN00000000SAMN13634199
INFECT2027_SDSE
GCA_009847535.1ContigWVGS00000000SAMN13634610
INFECT6056_SDSE
GCA_009847965.1ContigWVHD00000000SAMN13634599
INFECT5041_SDSE
GCA_008121855.1ContigSJLT00000000SAMN10996161
SDES5005
GCA_008121785.1ContigSJLP00000000SAMN10996165
SDES6020
GCA_008121765.1ContigSJLQ00000000SAMN10996164
SDES6017
GCA_008121795.1ContigSJLR00000000SAMN10996163
SDES6007
GCA_008121775.1ContigSJLS00000000SAMN10996162
SDES6006
GCA_009848275.1ContigWVGT00000000SAMN13634609
INFECT6047_SEZ
GCA_006364895.1ContigVCID00000000SAMN10996185
SPY6028
GCA_006364945.1ContigVCIF00000000SAMN10996177
SPY5448
GCA_006364905.1ContigVCIE00000000SAMN10996178
SPY5626
GCA_006364865.1ContigVCIB00000000SAMN10996189
SPY8157
GCA_006364855.1ContigVCIC00000000SAMN10996188
SPY8003
GCA_011317345.1ContigWUCJ00000000SAMN13671699
INFECT2056_SPY
GCA_011317275.1ContigWUCI00000000SAMN13671700
INFECT3037_SPY
GCA_011317265.1ContigWUCH00000000SAMN13671701
INFECT5010_SPY
GCA_011317245.1ContigWUCG00000000SAMN13671702
INFECT5012_SPY
GCA_011317225.1ContigWUCF00000000SAMN13671703
INFECT6057_SPY
GCA_009848195.1ContigWVGM00000000SAMN13634200
INFECT2058_SPY
GCA_009848235.1ContigWVGU00000000SAMN13634608
INFECT6046_SPY
GCA_009848175.1ContigWVFZ00000000SAMN13634213
INFECT2094_SPY
GCA_009848135.1ContigWVFY00000000SAMN13634214
INFECT2096_SPY
GCA_009848075.1ContigWVEW00000000SAMN13634242
INFECT5013_SPY
GCA_009847735.1ContigWVFA00000000SAMN13634238
INFECT3061_SPY
GCA_009847715.1ContigWVFB00000000SAMN13634237
INFECT3057_SPY
GCA_009847685.1ContigWVEZ00000000SAMN13634239
INFECT4008_SPY
GCA_009848245.1ContigWVGR00000000SAMN13634611
INFECT6058_SPY
GCA_009848225.1ContigWVGO00000000SAMN13634198
INFECT2002_SPY
GCA_009848035.1ContigWVEV00000000SAMN13634243
INFECT5014_SPY
GCA_009848015.1ContigWVEU00000000SAMN13634244
INFECT5020_SPY
GCA_009848105.1ContigWVFX00000000SAMN13634215
INFECT2106_SPY
GCA_009848085.1ContigWVFW00000000SAMN13634216
INFECT2118_SPY
GCA_009847925.1ContigWVFM00000000SAMN13634226
INFECT3010_SPY
GCA_009848045.1ContigWVEX00000000SAMN13634241
INFECT5011_SPY
GCA_009847905.1ContigWVHG00000000SAMN13634596
INFECT5032_SPY
GCA_009847995.1ContigWVET00000000SAMN13634245
INFECT5022_SPY
GCA_009847855.1ContigWVGG00000000SAMN13634206
INFECT2076_SPY
GCA_009847955.1ContigWVHF00000000SAMN13634597
INFECT5033_SPY
GCA_009847935.1ContigWVHE00000000SAMN13634598
INFECT5034_SPY
GCA_009847865.1ContigWVFK00000000SAMN13634228
INFECT3017_SPY
GCA_009847875.1ContigWVGF00000000SAMN13634207
INFECT2077_SPY
GCA_009847785.1ContigWVGI00000000SAMN13634204
INFECT2073_SPY
GCA_009847775.1ContigWVFC00000000SAMN13634236
INFECT3054_SPY
GCA_009847815.1ContigWVFJ00000000SAMN13634229
INFECT3019_SPY
GCA_009847805.1ContigWVFL00000000SAMN13634227
INFECT3016_SPY
GCA_009847675.1ContigWVGE00000000SAMN13634208
INFECT2080_SPY
GCA_009847665.1ContigWVGC00000000SAMN13634210
INFECT2085_SPY
GCA_009847565.1ContigWVGZ00000000SAMN13634603
INFECT6029_SPY
GCA_009847455.1ContigWVGL00000000SAMN13634201
INFECT2060_SPY
GCA_009847505.1ContigWVGV00000000SAMN13634607
INFECT6045_SPY
GCA_009847475.1ContigWVGK00000000SAMN13634202
INFECT2068_SPY
GCA_009847445.1ContigWVGJ00000000SAMN13634203
INFECT2072_SPY
GCA_009847425.1ContigWVFV00000000SAMN13634217
INFECT2131_SPY
GCA_009847385.1ContigWVGH00000000SAMN13634205
INFECT2075_SPY
GCA_009847355.1ContigWVFT00000000SAMN13634219
INFECT2134_SPY
GCA_009847375.1ContigWVGA00000000SAMN13634212
INFECT2092_SPY
GCA_009847345.1ContigWVFU00000000SAMN13634218
INFECT2132_SPY
GCA_009847315.1ContigWVFP00000000SAMN13634223
INFECT2175_SPY
GCA_009847295.1ContigWVFO00000000SAMN13634224
INFECT3008_SPY
GCA_009847285.1ContigWVFR00000000SAMN13634221
INFECT2154_SPY
GCA_009847185.1ContigWVFG00000000SAMN13634232
INFECT3033_SPY
GCA_009847245.1ContigWVFQ00000000SAMN13634222
INFECT2174_SPY
GCA_009847225.1ContigWVFS00000000SAMN13634220
INFECT2146_SPY
GCA_009847215.1ContigWVFN00000000SAMN13634225
INFECT3009_SPY
GCA_009847195.1ContigWVFH00000000SAMN13634231
INFECT3032_SPY
GCA_009847115.1ContigWVFI00000000SAMN13634230
INFECT3021_SPY
GCA_009847095.1ContigWVFE00000000SAMN13634234
INFECT3043_SPY
GCA_009847125.1ContigWVFF00000000SAMN13634233
INFECT3041_SPY
GCA_009847055.1ContigWVFD00000000SAMN13634235
INFECT3046_SPY
GCA_009847085.1ContigWVGD00000000SAMN13634209
INFECT2084_SPY
GCA_009847025.1ContigWVHJ00000000SAMN13634593
INFECT5024_SPY
GCA_009847645.1ContigWVEY00000000SAMN13634240
INFECT4009_SPY
GCA_009847615.1ContigWVGY00000000SAMN13634604
INFECT6034_SPY
GCA_009847555.1ContigWVGW00000000SAMN13634606
INFECT6039_SPY
GCA_009847515.1ContigWVGP00000000SAMN13634197
INFECT2001_SPY
GCA_009846945.1ContigWVHC00000000SAMN13634600
INFECT5042_SPY
GCA_009846965.1ContigWVHB00000000SAMN13634601
INFECT5045_SPY
GCA_009846955.1ContigWVHA00000000SAMN13634602
INFECT5048_SPY
GCA_009846925.1ContigWVHH00000000SAMN13634595
INFECT5031_SPY
GCA_008121715.1ContigSJLL00000000SAMN10996169
SPY2028
GCA_008121695.1ContigSJLK00000000SAMN10996170
SPY3005
GCA_008121685.1ContigSJLJ00000000SAMN10996171
SPY3012
GCA_008121625.1ContigSJLI00000000SAMN10996172
SPY5003
GCA_008121705.1ContigSJLM00000000SAMN10996168
SPY2017
GCA_008121655.1ContigSJKX00000000SAMN10996186
SPY6033
GCA_008121615.1ContigSJLD00000000SAMN10996179
SPY6004
GCA_008121605.1ContigSJKW00000000SAMN10996187
SPY6040
GCA_008121595.1ContigSJLH00000000SAMN10996173
SPY5004
GCA_008122125.1ContigSJLN00000000SAMN10996167
SPY2015
GCA_008122095.1ContigSJLO00000000SAMN10996166
SPY2006
GCA_008122065.1ContigSJLE00000000SAMN10996176
SPY5006C
GCA_008122075.1ContigSJLG00000000SAMN10996174
SPY5006A
GCA_008122055.1ContigSJLF00000000SAMN10996175
SPY5006B
GCA_008121985.1ContigSJLB00000000SAMN10996181
SPY6016
GCA_008122015.1ContigSJLA00000000SAMN10996182
SPY6018
GCA_008121975.1ContigSJLC00000000SAMN10996180
SPY6013
GCA_008121965.1ContigSJKY00000000SAMN10996184
SPY6026
GCA_008121955.1ContigSJKZ00000000SAMN10996183
SPY6025

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