Salmonella enterica (ID 622256) - BioProject

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Accession: PRJNA622256 ID: 622256

Salmonella enterica

Salmonella enterica isolated from Diseased Animals

See Genome Information for Salmonella enterica

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This project is a component of the FDA CVM

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3966 additional projects are related by organism.

6 additional projects are components of the FDA CVM.

Comparative Genomic Analysis of Salmonella Strains Isolated from Diseased Animals

Accession	PRJNA622256
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Salmonella enterica[Taxonomy ID: 28901] Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Publications	Zhao S et al., "Comparative Genomic Analysis of 450 Strains of Salmonellaenterica Isolated from Diseased Animals.", Genes (Basel), 2020 Sep 1;11(9)
Submission	Registration date: 21-Dec-2020 FDA-CVM

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	152
WGS master	5
Genomic DNA	147
SRA Experiments	491
Protein Sequences	200262
Publications
PubMed	1
PMC	1
Other datasets
BioSample	450
Assembly	48

Assembly details:

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Assembly level

Number of Assemblies

39
4
5
48

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_020292125.1	ABCXMR000000000		SAMN14504972	CVM 35565	Salmonella enterica subsp. enterica serovar Poona
GCA_016454645.1		3	SAMN14504560	CVM 20760	Salmonella enterica subsp. enterica serovar Heidelberg
GCA_016454625.1		3	SAMN14504561	CVM 20761	Salmonella enterica subsp. enterica serovar Havana
GCA_016454605.1		3	SAMN14504562	CVM 20762	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_016454585.1		2	SAMN14504574	CVM 21974	Salmonella enterica subsp. enterica serovar Agona
GCA_016454565.1		3	SAMN14504578	CVM 21978	Salmonella enterica subsp. enterica serovar Reading
GCA_016454545.1		4	SAMN14504594	CVM 22436	Salmonella enterica subsp. enterica serovar Uganda
GCA_016454525.1		2	SAMN14504595	CVM 22437	Salmonella enterica subsp. enterica serovar Uganda
GCA_016454505.1		2	SAMN14504600	CVM 22448	Salmonella enterica subsp. enterica serovar Anatum
GCA_016454485.1		3	SAMN14504624	CVM 22504	Salmonella enterica subsp. enterica serovar Muenster
GCA_016454465.1		2	SAMN14504656	CVM 22536	Salmonella enterica subsp. enterica serovar Muenchen
GCA_016454445.1		3	SAMN14504703	CVM 24350	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_016454425.1		2	SAMN14504707	CVM 24355	Salmonella enterica subsp. enterica serovar Senftenberg
GCA_016454405.1		8	SAMN14504709	CVM 24358	Salmonella enterica subsp. enterica serovar Bredeney
GCA_016454385.1		3	SAMN14504710	CVM 24359	Salmonella enterica subsp. enterica serovar Heidelberg
GCA_016454365.1		5	SAMN14504713	CVM 24362	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_016454345.1		4	SAMN14504718	CVM 24374	Salmonella enterica subsp. enterica serovar Newport
GCA_016454325.1		2	SAMN14504724	CVM 24392	Salmonella enterica subsp. enterica serovar Hadar
GCA_016454305.1		2	SAMN14504730	CVM 24399	Salmonella enterica subsp. houtenae serovar 43:z4
GCA_016454285.1		3	SAMN14504742	CVM 28296	Salmonella enterica subsp. enterica serovar Choleraesuis
GCA_016454265.1		4	SAMN14504769	CVM 28322	Salmonella enterica subsp. enterica serovar Heidelberg
GCA_016454245.1		2	SAMN14504782	CVM 28336	Salmonella enterica subsp. enterica serovar Agona
GCA_016454225.1		3	SAMN14504796	CVM 30148	Salmonella enterica subsp. enterica serovar Worthington
GCA_016454205.1		3	SAMN14504815	CVM 30168	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_016454185.1		1	SAMN14504823	CVM 30176	Salmonella enterica subsp. enterica serovar Bovismorbificans
GCA_016454165.1		3	SAMN14504824	CVM 30177	Salmonella enterica subsp. enterica serovar Kentucky
GCA_016454785.1		2	SAMN14504662	CVM 22543	Salmonella enterica subsp. enterica serovar Saintpaul
GCA_016454765.1		3	SAMN14504803	CVM 30155	Salmonella enterica subsp. enterica serovar Derby
GCA_016454745.1		2	SAMN14504541	CVM 20739	Salmonella enterica subsp. enterica serovar Krefeld
GCA_016454725.1		8	SAMN14504525	CVM 20723	Salmonella enterica subsp. enterica serovar Uganda
GCA_016454705.1		3	SAMN14504546	CVM 20744	Salmonella enterica subsp. enterica serovar Muenchen
GCA_016454685.1		3	SAMN14504547	CVM 20746	Salmonella enterica subsp. enterica serovar Anatum
GCA_016454665.1		3	SAMN14504550	CVM 20749	Salmonella enterica subsp. enterica serovar Senftenberg
GCA_016452165.1		6	SAMN14504767	CVM 28321-a	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_016452145.1		4	SAMN14504852	CVM 33822	Salmonella enterica subsp. enterica serovar Anatum
GCA_016452125.1		10	SAMN14504865	CVM 33836	Salmonella enterica subsp. enterica serovar Worthington
GCA_016452105.1		7	SAMN14504879	CVM 34514	Salmonella enterica subsp. enterica serovar Senftenberg
GCA_016452085.1		5	SAMN14504890	CVM 34526	Salmonella enterica subsp. enterica serovar Muenster
GCA_016452065.1		3	SAMN14504894	CVM 34530	Salmonella enterica subsp. enterica serovar Newport
GCA_016452045.1		2	SAMN14504909	CVM 35009	Salmonella enterica subsp. enterica serovar Uganda
GCA_016452025.1		2	SAMN14504919	CVM 35153	Salmonella enterica subsp. enterica serovar London
GCA_016452005.1		3	SAMN14504925	CVM 35161	Salmonella enterica subsp. enterica serovar Heidelberg
GCA_016451985.1		3	SAMN14504941	CVM 35189	Salmonella enterica subsp. enterica serovar Reading
GCA_016174665.1	AAXZQR000000000		SAMN14504930	CVM 35166	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_016174865.1	AAXZQS000000000		SAMN14504524	CVM 20722	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_016176265.1	AAXZQW000000000		SAMN14504833	CVM 31297	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_016176245.1	AAXZQT000000000		SAMN14504660	CVM 22540	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_016952595.1		3	SAMN14504768	CVM 28321-b	Salmonella enterica subsp. enterica serovar Typhimurium

SRA Data Details

Parameter	Value
Data volume, Gbases	279
Data volume, Tbytes	0.14

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Salmonella enterica

Salmonella enterica isolated from Diseased Animals

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